RNA–Protein interactions for RNA: ENST00000586331.1

RDH13-204, Transcript of retinol dehydrogenase 13, humanhuman

TSL 5

Gene RDH13, Length 1,971 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-204ENST00000586331 NISCHQ9Y2I1 1504 aa23.83■■□□□ 1.41
RDH13-204ENST00000586331 CCDC180Q9P1Z9 1646 aa21.29■■□□□ 1
RDH13-204ENST00000586331 ABCC9O60706 1549 aa20.83■□□□□ 0.92
RDH13-204ENST00000586331 RB1CC1Q8TDY2 1594 aa20■□□□□ 0.79
RDH13-204ENST00000586331 NACADO15069 1562 aa19.94■□□□□ 0.78
RDH13-204ENST00000586331 ZCCHC6Q5VYS8 1495 aaKnown RBP19.87■□□□□ 0.77
RDH13-204ENST00000586331 MYO15BQ96JP2 1530 aa19.79■□□□□ 0.76
RDH13-204ENST00000586331 DCAF8L2P0C7V8 631 aa19.77■□□□□ 0.76
RDH13-204ENST00000586331 UNC13AQ9UPW8 1703 aa19.74■□□□□ 0.75
RDH13-204ENST00000586331 DCAF1Q9Y4B6 1507 aa19.7■□□□□ 0.74
RDH13-204ENST00000586331 BICRAQ9NZM4 1560 aa19.48■□□□□ 0.71
RDH13-204ENST00000586331 SCRIBQ14160 1630 aa19.42■□□□□ 0.7
RDH13-204ENST00000586331 PABPN1Q86U42 306 aaKnown RBP eCLIP19.37■□□□□ 0.69
RDH13-204ENST00000586331 SHROOM4Q9ULL8 1493 aa19.16■□□□□ 0.66
RDH13-204ENST00000586331 DNAJC5BQ9UF47 199 aa19.15■□□□□ 0.66
RDH13-204ENST00000586331 EIF4G1Q04637 1599 aaKnown RBP18.93■□□□□ 0.62
RDH13-204ENST00000586331 CC2D2AQ9P2K1 1620 aa18.88■□□□□ 0.61
RDH13-204ENST00000586331 HRCP23327 699 aa18.72■□□□□ 0.59
RDH13-204ENST00000586331 CECR2Q9BXF3 1484 aa18.69■□□□□ 0.58
RDH13-204ENST00000586331 SMARCA4P51532 1647 aa18.56■□□□□ 0.56
RDH13-204ENST00000586331 BAZ1AQ9NRL2 1556 aaPredicted RBP18.47■□□□□ 0.55
RDH13-204ENST00000586331 ATAD2BQ9ULI0 1458 aa18.4■□□□□ 0.54
RDH13-204ENST00000586331 MROH2BQ7Z745 1585 aa18.4■□□□□ 0.54
RDH13-204ENST00000586331 NCAPD3P42695 1498 aa18.38■□□□□ 0.53
RDH13-204ENST00000586331 SMARCA2P51531 1590 aa18.37■□□□□ 0.53
RDH13-204ENST00000586331 PEG3Q9GZU2 1588 aa18.36■□□□□ 0.53
RDH13-204ENST00000586331 HMGXB3Q12766 1538 aa18.35■□□□□ 0.53
RDH13-204ENST00000586331 PELP1Q8IZL8 1130 aaKnown RBP18.34■□□□□ 0.53
RDH13-204ENST00000586331 SUPT5HO00267 1087 aaKnown RBP18.28■□□□□ 0.52
RDH13-204ENST00000586331 BAZ1BQ9UIG0 1483 aaKnown RBP18.24■□□□□ 0.51
RDH13-204ENST00000586331 WIZO95785 1651 aa18.24■□□□□ 0.51
RDH13-204ENST00000586331 PCGF6Q9BYE7 350 aa18.17■□□□□ 0.5
RDH13-204ENST00000586331 CHIC1Q5VXU3 224 aa18.12■□□□□ 0.49
RDH13-204ENST00000586331 RSF1Q96T23 1441 aaPredicted RBP18.1■□□□□ 0.49
RDH13-204ENST00000586331 NESP48681 1621 aa18.04■□□□□ 0.48
RDH13-204ENST00000586331 PPARGC1BQ86YN6 1023 aaKnown RBP18.02■□□□□ 0.47
RDH13-204ENST00000586331 TOP2AP11388 1531 aaKnown RBP17.99■□□□□ 0.47
RDH13-204ENST00000586331 LAMC3Q9Y6N6 1575 aa17.95■□□□□ 0.46
RDH13-204ENST00000586331 KIF21AQ7Z4S6 1674 aa17.91■□□□□ 0.46
RDH13-204ENST00000586331 ERCC6Q03468 1493 aa17.9■□□□□ 0.46
RDH13-204ENST00000586331 THOC2Q8NI27 1593 aaKnown RBP17.84■□□□□ 0.45
RDH13-204ENST00000586331 ZEB1P37275 1124 aaPredicted RBP17.83■□□□□ 0.44
RDH13-204ENST00000586331 TRIM26Q12899 539 aaPredicted RBP17.8■□□□□ 0.44
RDH13-204ENST00000586331 CADPSQ9ULU8 1353 aa17.8■□□□□ 0.44
RDH13-204ENST00000586331 PRDM2Q13029 1718 aa17.77■□□□□ 0.44
RDH13-204ENST00000586331 CUX2O14529 1486 aa17.75■□□□□ 0.43
RDH13-204ENST00000586331 MYT1Q01538 1121 aa17.74■□□□□ 0.43
RDH13-204ENST00000586331 CCDC88BA6NC98 1476 aa17.73■□□□□ 0.43
RDH13-204ENST00000586331 CFTRP13569 1480 aa17.73■□□□□ 0.43
RDH13-204ENST00000586331 PDS5BQ9NTI5 1447 aa17.73■□□□□ 0.43
RDH13-204ENST00000586331 FANCD2Q9BXW9 1451 aa17.66■□□□□ 0.42
RDH13-204ENST00000586331 CEP164Q9UPV0 1460 aa17.65■□□□□ 0.42
RDH13-204ENST00000586331 MRC2Q9UBG0 1479 aa17.63■□□□□ 0.41
RDH13-204ENST00000586331 WDR62O43379 1518 aa17.63■□□□□ 0.41
RDH13-204ENST00000586331 SCAF1Q9H7N4 1312 aaKnown RBP17.57■□□□□ 0.4
RDH13-204ENST00000586331 URB2Q14146 1524 aaKnown RBP17.53■□□□□ 0.4
RDH13-204ENST00000586331 LOC105371045A0A1W2PR82 267 aa17.51■□□□□ 0.39
RDH13-204ENST00000586331 TOPBP1Q92547 1522 aa17.4■□□□□ 0.38
RDH13-204ENST00000586331 DNMBPQ6XZF7 1577 aa17.38■□□□□ 0.37
RDH13-204ENST00000586331 ABCC8Q09428 1581 aa17.29■□□□□ 0.36
RDH13-204ENST00000586331 ACIN1Q9UKV3 1341 aaKnown RBP17.28■□□□□ 0.36
RDH13-204ENST00000586331 TARBP1Q13395 1621 aaKnown RBP17.27■□□□□ 0.35
RDH13-204ENST00000586331 CUX1P39880 1505 aa17.27■□□□□ 0.35
RDH13-204ENST00000586331 IFT140Q96RY7 1462 aa17.25■□□□□ 0.35
RDH13-204ENST00000586331 ZNF608Q9ULD9 1512 aaPredicted RBP17.24■□□□□ 0.35
RDH13-204ENST00000586331 POLA1P09884 1462 aaPredicted RBP17.24■□□□□ 0.35
RDH13-204ENST00000586331 EIF4G3O43432 1585 aaKnown RBP17.24■□□□□ 0.35
RDH13-204ENST00000586331 DNAJC5Q9H3Z4 198 aa17.22■□□□□ 0.35
RDH13-204ENST00000586331 FGD5Q6ZNL6 1462 aa17.19■□□□□ 0.34
RDH13-204ENST00000586331 WDR97A6NE52 1622 aa17.18■□□□□ 0.34
RDH13-204ENST00000586331 CENPBP07199 599 aaPredicted RBP17.17■□□□□ 0.34
RDH13-204ENST00000586331 RAD54L2Q9Y4B4 1467 aa17.16■□□□□ 0.34
RDH13-204ENST00000586331 BIVM-ERCC5R4GMW8 1640 aa17.14■□□□□ 0.33
RDH13-204ENST00000586331 SYNJ1O43426 1573 aa17.13■□□□□ 0.33
RDH13-204ENST00000586331 TOP2BQ02880 1626 aa17.1■□□□□ 0.33
RDH13-204ENST00000586331 NEUROD1Q13562 356 aa17.09■□□□□ 0.33
RDH13-204ENST00000586331 TRIM41Q8WV44 630 aa17.09■□□□□ 0.33
RDH13-204ENST00000586331 AQRO60306 1485 aaKnown RBP eCLIP17.09■□□□□ 0.33
RDH13-204ENST00000586331 SOGA1O94964 1423 aa17.09■□□□□ 0.33
RDH13-204ENST00000586331 CHD1O14646 1710 aa17.07■□□□□ 0.32
RDH13-204ENST00000586331 WRNQ14191 1432 aaPredicted RBP eCLIP17.05■□□□□ 0.32
RDH13-204ENST00000586331 PBRM1Q86U86 1689 aa17.05■□□□□ 0.32
RDH13-204ENST00000586331 GTF3C3Q9Y5Q9 886 aa17.03■□□□□ 0.32
RDH13-204ENST00000586331 ABCA5Q8WWZ7 1642 aa17.03■□□□□ 0.32
RDH13-204ENST00000586331 TDRD9Q8NDG6 1382 aaKnown RBP17.02■□□□□ 0.31
RDH13-204ENST00000586331 ABCA10Q8WWZ4 1543 aa17■□□□□ 0.31
RDH13-204ENST00000586331 SNAPC4Q5SXM2 1469 aa16.96■□□□□ 0.31
RDH13-204ENST00000586331 DIEXFQ68CQ4 756 aaKnown RBP16.95■□□□□ 0.3
RDH13-204ENST00000586331 GRIN2BQ13224 1484 aa16.93■□□□□ 0.3
RDH13-204ENST00000586331 GAPVD1Q14C86 1478 aa16.93■□□□□ 0.3
RDH13-204ENST00000586331 MAGI1Q96QZ7 1491 aaPredicted RBP16.9■□□□□ 0.3
RDH13-204ENST00000586331 CCER1Q8TC90 406 aaPredicted RBP16.9■□□□□ 0.3
RDH13-204ENST00000586331 OSCARQ8IYS5 282 aa16.89■□□□□ 0.3
RDH13-204ENST00000586331 ADAMTS12P58397 1594 aa16.86■□□□□ 0.29
RDH13-204ENST00000586331 FAM9AQ8IZU1 332 aaPredicted RBP16.86■□□□□ 0.29
RDH13-204ENST00000586331 RIMBP3CA6NJZ7 1639 aa16.84■□□□□ 0.29
RDH13-204ENST00000586331 RIMBP3BA6NNM3 1639 aa16.84■□□□□ 0.29
RDH13-204ENST00000586331 RIMBP3Q9UFD9 1639 aa16.84■□□□□ 0.29
RDH13-204ENST00000586331 SYNJ2O15056 1496 aa16.84■□□□□ 0.29
RDH13-204ENST00000586331 CLASP1Q7Z460 1538 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms