RNA–Protein interactions for RNA: ENST00000586275.1

PDE4A-205, Transcript of phosphodiesterase 4A, humanhuman

TSL 3

Gene PDE4A, Length 695 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-205ENST00000586275 NISCHQ9Y2I1 1504 aa52.2■■■■■ 5.95
PDE4A-205ENST00000586275 CCDC180Q9P1Z9 1646 aa46.61■■■■■ 5.05
PDE4A-205ENST00000586275 ABCC9O60706 1549 aa46.4■■■■■ 5.02
PDE4A-205ENST00000586275 RB1CC1Q8TDY2 1594 aa44.28■■■■■ 4.68
PDE4A-205ENST00000586275 NACADO15069 1562 aa44.06■■■■■ 4.64
PDE4A-205ENST00000586275 DCAF8L2P0C7V8 631 aa44■■■■■ 4.63
PDE4A-205ENST00000586275 MYO15BQ96JP2 1530 aa43.59■■■■■ 4.57
PDE4A-205ENST00000586275 ZCCHC6Q5VYS8 1495 aaKnown RBP43.32■■■■■ 4.52
PDE4A-205ENST00000586275 PABPN1Q86U42 306 aaKnown RBP eCLIP43.3■■■■■ 4.52
PDE4A-205ENST00000586275 DNAJC5BQ9UF47 199 aa43.3■■■■■ 4.52
PDE4A-205ENST00000586275 DCAF1Q9Y4B6 1507 aa43.14■■■■■ 4.5
PDE4A-205ENST00000586275 UNC13AQ9UPW8 1703 aa43.11■■■■■ 4.49
PDE4A-205ENST00000586275 BICRAQ9NZM4 1560 aa42.95■■■■■ 4.47
PDE4A-205ENST00000586275 SCRIBQ14160 1630 aa42.51■■■■■ 4.4
PDE4A-205ENST00000586275 SHROOM4Q9ULL8 1493 aa42.47■■■■■ 4.39
PDE4A-205ENST00000586275 EIF4G1Q04637 1599 aaKnown RBP41.89■■■■■ 4.3
PDE4A-205ENST00000586275 CC2D2AQ9P2K1 1620 aa41.88■■■■■ 4.3
PDE4A-205ENST00000586275 CECR2Q9BXF3 1484 aa41.79■■■■■ 4.28
PDE4A-205ENST00000586275 NCAPD3P42695 1498 aa40.73■■■■■ 4.11
PDE4A-205ENST00000586275 ATAD2BQ9ULI0 1458 aa40.63■■■■■ 4.09
PDE4A-205ENST00000586275 SMARCA4P51532 1647 aa40.6■■■■■ 4.09
PDE4A-205ENST00000586275 SMARCA2P51531 1590 aa40.51■■■■■ 4.08
PDE4A-205ENST00000586275 BAZ1AQ9NRL2 1556 aaPredicted RBP40.48■■■■■ 4.07
PDE4A-205ENST00000586275 HMGXB3Q12766 1538 aa40.4■■■■■ 4.06
PDE4A-205ENST00000586275 BAZ1BQ9UIG0 1483 aaKnown RBP40.24■■■■■ 4.03
PDE4A-205ENST00000586275 PEG3Q9GZU2 1588 aa40.23■■■■■ 4.03
PDE4A-205ENST00000586275 MROH2BQ7Z745 1585 aa40.21■■■■■ 4.03
PDE4A-205ENST00000586275 ERCC6Q03468 1493 aa40.05■■■■■ 4
PDE4A-205ENST00000586275 NESP48681 1621 aa39.94■■■■□ 3.98
PDE4A-205ENST00000586275 CUX2O14529 1486 aa39.87■■■■□ 3.97
PDE4A-205ENST00000586275 LAMC3Q9Y6N6 1575 aa39.69■■■■□ 3.94
PDE4A-205ENST00000586275 WIZO95785 1651 aa39.68■■■■□ 3.94
PDE4A-205ENST00000586275 DNAJC5Q9H3Z4 198 aa39.56■■■■□ 3.92
PDE4A-205ENST00000586275 RSF1Q96T23 1441 aaPredicted RBP39.54■■■■□ 3.92
PDE4A-205ENST00000586275 PDS5BQ9NTI5 1447 aa39.53■■■■□ 3.92
PDE4A-205ENST00000586275 CADPSQ9ULU8 1353 aa39.52■■■■□ 3.92
PDE4A-205ENST00000586275 THOC2Q8NI27 1593 aaKnown RBP39.41■■■■□ 3.9
PDE4A-205ENST00000586275 KIF21AQ7Z4S6 1674 aa39.32■■■■□ 3.89
PDE4A-205ENST00000586275 TOP2AP11388 1531 aaKnown RBP39.25■■■■□ 3.87
PDE4A-205ENST00000586275 MRC2Q9UBG0 1479 aa39.13■■■■□ 3.85
PDE4A-205ENST00000586275 CFTRP13569 1480 aa39.11■■■■□ 3.85
PDE4A-205ENST00000586275 FANCD2Q9BXW9 1451 aa39.04■■■■□ 3.84
PDE4A-205ENST00000586275 CEP164Q9UPV0 1460 aa39.04■■■■□ 3.84
PDE4A-205ENST00000586275 WDR62O43379 1518 aa38.99■■■■□ 3.83
PDE4A-205ENST00000586275 CCDC88BA6NC98 1476 aa38.85■■■■□ 3.81
PDE4A-205ENST00000586275 URB2Q14146 1524 aaKnown RBP38.68■■■■□ 3.78
PDE4A-205ENST00000586275 PRDM2Q13029 1718 aa38.54■■■■□ 3.76
PDE4A-205ENST00000586275 TOPBP1Q92547 1522 aa38.32■■■■□ 3.72
PDE4A-205ENST00000586275 ABCC8Q09428 1581 aa38.28■■■■□ 3.72
PDE4A-205ENST00000586275 IFT140Q96RY7 1462 aa38.27■■■■□ 3.72
PDE4A-205ENST00000586275 OSCARQ8IYS5 282 aa38.18■■■■□ 3.7
PDE4A-205ENST00000586275 DNMBPQ6XZF7 1577 aa38.18■■■■□ 3.7
PDE4A-205ENST00000586275 ZNF608Q9ULD9 1512 aaPredicted RBP38.15■■■■□ 3.7
PDE4A-205ENST00000586275 SUPT5HO00267 1087 aaKnown RBP38.06■■■■□ 3.68
PDE4A-205ENST00000586275 POLA1P09884 1462 aaPredicted RBP37.95■■■■□ 3.67
PDE4A-205ENST00000586275 TRIM41Q8WV44 630 aa37.93■■■■□ 3.66
PDE4A-205ENST00000586275 TARBP1Q13395 1621 aaKnown RBP37.9■■■■□ 3.66
PDE4A-205ENST00000586275 EIF4G3O43432 1585 aaKnown RBP37.89■■■■□ 3.66
PDE4A-205ENST00000586275 AQRO60306 1485 aaKnown RBP eCLIP37.88■■■■□ 3.654e-6■■□□□ 13.7
PDE4A-205ENST00000586275 SOGA1O94964 1423 aa37.83■■■■□ 3.65
PDE4A-205ENST00000586275 RAD54L2Q9Y4B4 1467 aa37.81■■■■□ 3.64
PDE4A-205ENST00000586275 CUX1P39880 1505 aa37.76■■■■□ 3.63
PDE4A-205ENST00000586275 FGD5Q6ZNL6 1462 aa37.75■■■■□ 3.63
PDE4A-205ENST00000586275 TDRD9Q8NDG6 1382 aaKnown RBP37.71■■■■□ 3.63
PDE4A-205ENST00000586275 FBLN2P98095 1184 aa37.6■■■■□ 3.61
PDE4A-205ENST00000586275 WDR97A6NE52 1622 aa37.56■■■■□ 3.6
PDE4A-205ENST00000586275 RIMBP3CA6NJZ7 1639 aa37.5■■■■□ 3.59
PDE4A-205ENST00000586275 RIMBP3BA6NNM3 1639 aa37.5■■■■□ 3.59
PDE4A-205ENST00000586275 RIMBP3Q9UFD9 1639 aa37.5■■■■□ 3.59
PDE4A-205ENST00000586275 CHD1O14646 1710 aa37.49■■■■□ 3.59
PDE4A-205ENST00000586275 ARHGEF11O15085 1522 aa37.47■■■■□ 3.59
PDE4A-205ENST00000586275 SNAPC4Q5SXM2 1469 aa37.46■■■■□ 3.59
PDE4A-205ENST00000586275 GRIN2BQ13224 1484 aa37.44■■■■□ 3.58
PDE4A-205ENST00000586275 MAGI1Q96QZ7 1491 aaPredicted RBP37.39■■■■□ 3.58
PDE4A-205ENST00000586275 CHMP7Q8WUX9 453 aaPredicted RBP37.38■■■■□ 3.57
PDE4A-205ENST00000586275 ABCA10Q8WWZ4 1543 aa37.36■■■■□ 3.57
PDE4A-205ENST00000586275 GAPVD1Q14C86 1478 aa37.34■■■■□ 3.57
PDE4A-205ENST00000586275 WRNQ14191 1432 aaPredicted RBP eCLIP37.31■■■■□ 3.56
PDE4A-205ENST00000586275 SYNJ2O15056 1496 aa37.27■■■■□ 3.56
PDE4A-205ENST00000586275 CYB5RLQ6IPT4 315 aa37.25■■■■□ 3.55
PDE4A-205ENST00000586275 TOP2BQ02880 1626 aa37.22■■■■□ 3.55
PDE4A-205ENST00000586275 ABCA5Q8WWZ7 1642 aa37.21■■■■□ 3.55
PDE4A-205ENST00000586275 BIVM-ERCC5R4GMW8 1640 aa37.18■■■■□ 3.54
PDE4A-205ENST00000586275 SYNJ1O43426 1573 aa37.17■■■■□ 3.54
PDE4A-205ENST00000586275 PBRM1Q86U86 1689 aa37.17■■■■□ 3.54
PDE4A-205ENST00000586275 CLASP1Q7Z460 1538 aa37.16■■■■□ 3.54
PDE4A-205ENST00000586275 ARAP1Q96P48 1450 aa37.13■■■■□ 3.53
PDE4A-205ENST00000586275 GRIN2AQ12879 1464 aa36.94■■■■□ 3.5
PDE4A-205ENST00000586275 ADAMTS12P58397 1594 aa36.91■■■■□ 3.5
PDE4A-205ENST00000586275 FHAD1B1AJZ9 1412 aa36.9■■■■□ 3.5
PDE4A-205ENST00000586275 ERICH3Q5RHP9 1530 aa36.89■■■■□ 3.5
PDE4A-205ENST00000586275 NUP160Q12769 1436 aa36.82■■■■□ 3.48
PDE4A-205ENST00000586275 CEP170Q5SW79 1584 aa36.75■■■■□ 3.47
PDE4A-205ENST00000586275 TRHP20396 242 aaPredicted RBP36.73■■■■□ 3.47
PDE4A-205ENST00000586275 ERCC6L2Q5T890 1561 aa36.6■■■■□ 3.45
PDE4A-205ENST00000586275 KIF27Q86VH2 1401 aa36.58■■■■□ 3.45
PDE4A-205ENST00000586275 IGF1RP08069 1367 aa36.55■■■■□ 3.44
PDE4A-205ENST00000586275 SHROOM2Q13796 1616 aa36.55■■■■□ 3.44
PDE4A-205ENST00000586275 JPH4Q96JJ6 628 aa36.5■■■■□ 3.43
PDE4A-205ENST00000586275 PRG4Q92954 1404 aaPredicted RBP36.46■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms