RNA–Protein interactions for RNA: ENST00000586275.1

PDE4A-205, Transcript of phosphodiesterase 4A, humanhuman

TSL 3

Gene PDE4A, Length 695 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-205ENST00000586275 NISCHQ9Y2I1 1504 aa52.2■■■■■ 5.95
PDE4A-205ENST00000586275 CCDC180Q9P1Z9 1646 aa46.61■■■■■ 5.05
PDE4A-205ENST00000586275 ABCC9O60706 1549 aa46.4■■■■■ 5.02
PDE4A-205ENST00000586275 RB1CC1Q8TDY2 1594 aa44.28■■■■■ 4.68
PDE4A-205ENST00000586275 NACADO15069 1562 aa44.06■■■■■ 4.64
PDE4A-205ENST00000586275 DCAF8L2P0C7V8 631 aa44■■■■■ 4.63
PDE4A-205ENST00000586275 MYO15BQ96JP2 1530 aa43.59■■■■■ 4.57
PDE4A-205ENST00000586275 ZCCHC6Q5VYS8 1495 aaKnown RBP43.32■■■■■ 4.52
PDE4A-205ENST00000586275 PABPN1Q86U42 306 aaKnown RBP eCLIP43.3■■■■■ 4.52
PDE4A-205ENST00000586275 DNAJC5BQ9UF47 199 aa43.3■■■■■ 4.52
PDE4A-205ENST00000586275 DCAF1Q9Y4B6 1507 aa43.14■■■■■ 4.5
PDE4A-205ENST00000586275 UNC13AQ9UPW8 1703 aa43.11■■■■■ 4.49
PDE4A-205ENST00000586275 BICRAQ9NZM4 1560 aa42.95■■■■■ 4.47
PDE4A-205ENST00000586275 SCRIBQ14160 1630 aa42.51■■■■■ 4.4
PDE4A-205ENST00000586275 SHROOM4Q9ULL8 1493 aa42.47■■■■■ 4.39
PDE4A-205ENST00000586275 EIF4G1Q04637 1599 aaKnown RBP41.89■■■■■ 4.3
PDE4A-205ENST00000586275 CC2D2AQ9P2K1 1620 aa41.88■■■■■ 4.3
PDE4A-205ENST00000586275 CECR2Q9BXF3 1484 aa41.79■■■■■ 4.28
PDE4A-205ENST00000586275 NCAPD3P42695 1498 aa40.73■■■■■ 4.11
PDE4A-205ENST00000586275 ATAD2BQ9ULI0 1458 aa40.63■■■■■ 4.09
PDE4A-205ENST00000586275 SMARCA4P51532 1647 aa40.6■■■■■ 4.09
PDE4A-205ENST00000586275 SMARCA2P51531 1590 aa40.51■■■■■ 4.08
PDE4A-205ENST00000586275 BAZ1AQ9NRL2 1556 aaPredicted RBP40.48■■■■■ 4.07
PDE4A-205ENST00000586275 HMGXB3Q12766 1538 aa40.4■■■■■ 4.06
PDE4A-205ENST00000586275 BAZ1BQ9UIG0 1483 aaKnown RBP40.24■■■■■ 4.03
PDE4A-205ENST00000586275 PEG3Q9GZU2 1588 aa40.23■■■■■ 4.03
PDE4A-205ENST00000586275 MROH2BQ7Z745 1585 aa40.21■■■■■ 4.03
PDE4A-205ENST00000586275 ERCC6Q03468 1493 aa40.05■■■■■ 4
PDE4A-205ENST00000586275 NESP48681 1621 aa39.94■■■■□ 3.98
PDE4A-205ENST00000586275 CUX2O14529 1486 aa39.87■■■■□ 3.97
PDE4A-205ENST00000586275 LAMC3Q9Y6N6 1575 aa39.69■■■■□ 3.94
PDE4A-205ENST00000586275 WIZO95785 1651 aa39.68■■■■□ 3.94
PDE4A-205ENST00000586275 DNAJC5Q9H3Z4 198 aa39.56■■■■□ 3.92
PDE4A-205ENST00000586275 RSF1Q96T23 1441 aaPredicted RBP39.54■■■■□ 3.92
PDE4A-205ENST00000586275 PDS5BQ9NTI5 1447 aa39.53■■■■□ 3.92
PDE4A-205ENST00000586275 CADPSQ9ULU8 1353 aa39.52■■■■□ 3.92
PDE4A-205ENST00000586275 THOC2Q8NI27 1593 aaKnown RBP39.41■■■■□ 3.9
PDE4A-205ENST00000586275 KIF21AQ7Z4S6 1674 aa39.32■■■■□ 3.89
PDE4A-205ENST00000586275 TOP2AP11388 1531 aaKnown RBP39.25■■■■□ 3.87
PDE4A-205ENST00000586275 MRC2Q9UBG0 1479 aa39.13■■■■□ 3.85
PDE4A-205ENST00000586275 CFTRP13569 1480 aa39.11■■■■□ 3.85
PDE4A-205ENST00000586275 FANCD2Q9BXW9 1451 aa39.04■■■■□ 3.84
PDE4A-205ENST00000586275 CEP164Q9UPV0 1460 aa39.04■■■■□ 3.84
PDE4A-205ENST00000586275 WDR62O43379 1518 aa38.99■■■■□ 3.83
PDE4A-205ENST00000586275 CCDC88BA6NC98 1476 aa38.85■■■■□ 3.81
PDE4A-205ENST00000586275 URB2Q14146 1524 aaKnown RBP38.68■■■■□ 3.78
PDE4A-205ENST00000586275 PRDM2Q13029 1718 aa38.54■■■■□ 3.76
PDE4A-205ENST00000586275 TOPBP1Q92547 1522 aa38.32■■■■□ 3.72
PDE4A-205ENST00000586275 ABCC8Q09428 1581 aa38.28■■■■□ 3.72
PDE4A-205ENST00000586275 IFT140Q96RY7 1462 aa38.27■■■■□ 3.72
PDE4A-205ENST00000586275 OSCARQ8IYS5 282 aa38.18■■■■□ 3.7
PDE4A-205ENST00000586275 DNMBPQ6XZF7 1577 aa38.18■■■■□ 3.7
PDE4A-205ENST00000586275 ZNF608Q9ULD9 1512 aaPredicted RBP38.15■■■■□ 3.7
PDE4A-205ENST00000586275 SUPT5HO00267 1087 aaKnown RBP38.06■■■■□ 3.68
PDE4A-205ENST00000586275 POLA1P09884 1462 aaPredicted RBP37.95■■■■□ 3.67
PDE4A-205ENST00000586275 TRIM41Q8WV44 630 aa37.93■■■■□ 3.66
PDE4A-205ENST00000586275 TARBP1Q13395 1621 aaKnown RBP37.9■■■■□ 3.66
PDE4A-205ENST00000586275 EIF4G3O43432 1585 aaKnown RBP37.89■■■■□ 3.66
PDE4A-205ENST00000586275 AQRO60306 1485 aaKnown RBP eCLIP37.88■■■■□ 3.654e-6■■□□□ 13.7
PDE4A-205ENST00000586275 SOGA1O94964 1423 aa37.83■■■■□ 3.65
PDE4A-205ENST00000586275 RAD54L2Q9Y4B4 1467 aa37.81■■■■□ 3.64
PDE4A-205ENST00000586275 CUX1P39880 1505 aa37.76■■■■□ 3.63
PDE4A-205ENST00000586275 FGD5Q6ZNL6 1462 aa37.75■■■■□ 3.63
PDE4A-205ENST00000586275 TDRD9Q8NDG6 1382 aaKnown RBP37.71■■■■□ 3.63
PDE4A-205ENST00000586275 FBLN2P98095 1184 aa37.6■■■■□ 3.61
PDE4A-205ENST00000586275 WDR97A6NE52 1622 aa37.56■■■■□ 3.6
PDE4A-205ENST00000586275 RIMBP3CA6NJZ7 1639 aa37.5■■■■□ 3.59
PDE4A-205ENST00000586275 RIMBP3BA6NNM3 1639 aa37.5■■■■□ 3.59
PDE4A-205ENST00000586275 RIMBP3Q9UFD9 1639 aa37.5■■■■□ 3.59
PDE4A-205ENST00000586275 CHD1O14646 1710 aa37.49■■■■□ 3.59
PDE4A-205ENST00000586275 ARHGEF11O15085 1522 aa37.47■■■■□ 3.59
PDE4A-205ENST00000586275 SNAPC4Q5SXM2 1469 aa37.46■■■■□ 3.59
PDE4A-205ENST00000586275 GRIN2BQ13224 1484 aa37.44■■■■□ 3.58
PDE4A-205ENST00000586275 MAGI1Q96QZ7 1491 aaPredicted RBP37.39■■■■□ 3.58
PDE4A-205ENST00000586275 CHMP7Q8WUX9 453 aaPredicted RBP37.38■■■■□ 3.57
PDE4A-205ENST00000586275 ABCA10Q8WWZ4 1543 aa37.36■■■■□ 3.57
PDE4A-205ENST00000586275 GAPVD1Q14C86 1478 aa37.34■■■■□ 3.57
PDE4A-205ENST00000586275 WRNQ14191 1432 aaPredicted RBP eCLIP37.31■■■■□ 3.56
PDE4A-205ENST00000586275 SYNJ2O15056 1496 aa37.27■■■■□ 3.56
PDE4A-205ENST00000586275 CYB5RLQ6IPT4 315 aa37.25■■■■□ 3.55
PDE4A-205ENST00000586275 TOP2BQ02880 1626 aa37.22■■■■□ 3.55
PDE4A-205ENST00000586275 ABCA5Q8WWZ7 1642 aa37.21■■■■□ 3.55
PDE4A-205ENST00000586275 BIVM-ERCC5R4GMW8 1640 aa37.18■■■■□ 3.54
PDE4A-205ENST00000586275 SYNJ1O43426 1573 aa37.17■■■■□ 3.54
PDE4A-205ENST00000586275 PBRM1Q86U86 1689 aa37.17■■■■□ 3.54
PDE4A-205ENST00000586275 CLASP1Q7Z460 1538 aa37.16■■■■□ 3.54
PDE4A-205ENST00000586275 ARAP1Q96P48 1450 aa37.13■■■■□ 3.53
PDE4A-205ENST00000586275 GRIN2AQ12879 1464 aa36.94■■■■□ 3.5
PDE4A-205ENST00000586275 ADAMTS12P58397 1594 aa36.91■■■■□ 3.5
PDE4A-205ENST00000586275 FHAD1B1AJZ9 1412 aa36.9■■■■□ 3.5
PDE4A-205ENST00000586275 ERICH3Q5RHP9 1530 aa36.89■■■■□ 3.5
PDE4A-205ENST00000586275 NUP160Q12769 1436 aa36.82■■■■□ 3.48
PDE4A-205ENST00000586275 CEP170Q5SW79 1584 aa36.75■■■■□ 3.47
PDE4A-205ENST00000586275 TRHP20396 242 aaPredicted RBP36.73■■■■□ 3.47
PDE4A-205ENST00000586275 ERCC6L2Q5T890 1561 aa36.6■■■■□ 3.45
PDE4A-205ENST00000586275 KIF27Q86VH2 1401 aa36.58■■■■□ 3.45
PDE4A-205ENST00000586275 IGF1RP08069 1367 aa36.55■■■■□ 3.44
PDE4A-205ENST00000586275 SHROOM2Q13796 1616 aa36.55■■■■□ 3.44
PDE4A-205ENST00000586275 JPH4Q96JJ6 628 aa36.5■■■■□ 3.43
PDE4A-205ENST00000586275 PRG4Q92954 1404 aaPredicted RBP36.46■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms