RNA–Protein interactions for RNA: ENST00000586224.5

TRMT1-206, Transcript of tRNA methyltransferase 1, humanhuman

TSL 3

Gene TRMT1, Length 543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT1-206ENST00000586224 NISCHQ9Y2I1 1504 aa31.98■■■□□ 2.71
TRMT1-206ENST00000586224 ABCC9O60706 1549 aa29.56■■■□□ 2.32
TRMT1-206ENST00000586224 DNAJC5BQ9UF47 199 aa28.6■■■□□ 2.17
TRMT1-206ENST00000586224 CCDC180Q9P1Z9 1646 aa28.52■■■□□ 2.16
TRMT1-206ENST00000586224 RB1CC1Q8TDY2 1594 aa27.59■■■□□ 2.01
TRMT1-206ENST00000586224 PABPN1Q86U42 306 aaKnown RBP eCLIP27.39■■□□□ 1.98
TRMT1-206ENST00000586224 NACADO15069 1562 aa27.15■■□□□ 1.94
TRMT1-206ENST00000586224 UNC13AQ9UPW8 1703 aa27.11■■□□□ 1.93
TRMT1-206ENST00000586224 BICRAQ9NZM4 1560 aa26.97■■□□□ 1.91
TRMT1-206ENST00000586224 DCAF8L2P0C7V8 631 aa26.94■■□□□ 1.9
TRMT1-206ENST00000586224 ZCCHC6Q5VYS8 1495 aaKnown RBP26.93■■□□□ 1.9
TRMT1-206ENST00000586224 DNAJC5Q9H3Z4 198 aa26.75■■□□□ 1.87
TRMT1-206ENST00000586224 CECR2Q9BXF3 1484 aa26.66■■□□□ 1.86
TRMT1-206ENST00000586224 DCAF1Q9Y4B6 1507 aa26.65■■□□□ 1.86
TRMT1-206ENST00000586224 CC2D2AQ9P2K1 1620 aa26.62■■□□□ 1.85
TRMT1-206ENST00000586224 MYO15BQ96JP2 1530 aa26.41■■□□□ 1.82
TRMT1-206ENST00000586224 EIF4G1Q04637 1599 aaKnown RBP26.32■■□□□ 1.8
TRMT1-206ENST00000586224 SHROOM4Q9ULL8 1493 aa26.25■■□□□ 1.79
TRMT1-206ENST00000586224 SCRIBQ14160 1630 aa26.1■■□□□ 1.77
TRMT1-206ENST00000586224 CUX2O14529 1486 aa25.69■■□□□ 1.7
TRMT1-206ENST00000586224 ERCC6Q03468 1493 aa25.5■■□□□ 1.67
TRMT1-206ENST00000586224 TRIM41Q8WV44 630 aa25.31■■□□□ 1.64
TRMT1-206ENST00000586224 NESP48681 1621 aa25.19■■□□□ 1.62
TRMT1-206ENST00000586224 NCAPD3P42695 1498 aa25.1■■□□□ 1.61
TRMT1-206ENST00000586224 THOC2Q8NI27 1593 aaKnown RBP25.05■■□□□ 1.6
TRMT1-206ENST00000586224 ATAD2BQ9ULI0 1458 aa24.96■■□□□ 1.59
TRMT1-206ENST00000586224 SMARCA2P51531 1590 aa24.88■■□□□ 1.57
TRMT1-206ENST00000586224 HMGXB3Q12766 1538 aa24.85■■□□□ 1.57
TRMT1-206ENST00000586224 KIF21AQ7Z4S6 1674 aa24.78■■□□□ 1.56
TRMT1-206ENST00000586224 RSF1Q96T23 1441 aaPredicted RBP24.74■■□□□ 1.55
TRMT1-206ENST00000586224 SMARCA4P51532 1647 aa24.73■■□□□ 1.55
TRMT1-206ENST00000586224 BAZ1AQ9NRL2 1556 aaPredicted RBP24.71■■□□□ 1.55
TRMT1-206ENST00000586224 SUPT5HO00267 1087 aaKnown RBP24.68■■□□□ 1.54
TRMT1-206ENST00000586224 LAMC3Q9Y6N6 1575 aa24.67■■□□□ 1.54
TRMT1-206ENST00000586224 BAZ1BQ9UIG0 1483 aaKnown RBP24.66■■□□□ 1.54
TRMT1-206ENST00000586224 MROH2BQ7Z745 1585 aa24.63■■□□□ 1.53
TRMT1-206ENST00000586224 PDS5BQ9NTI5 1447 aa24.53■■□□□ 1.52
TRMT1-206ENST00000586224 WIZO95785 1651 aa24.46■■□□□ 1.51
TRMT1-206ENST00000586224 MRC2Q9UBG0 1479 aa24.45■■□□□ 1.51
TRMT1-206ENST00000586224 PEG3Q9GZU2 1588 aa24.45■■□□□ 1.5
TRMT1-206ENST00000586224 WDR62O43379 1518 aa24.45■■□□□ 1.5
TRMT1-206ENST00000586224 OSCARQ8IYS5 282 aa24.35■■□□□ 1.49
TRMT1-206ENST00000586224 CADPSQ9ULU8 1353 aa24.3■■□□□ 1.48
TRMT1-206ENST00000586224 TOP2AP11388 1531 aaKnown RBP24.3■■□□□ 1.48
TRMT1-206ENST00000586224 RIMBP3CA6NJZ7 1639 aa24.28■■□□□ 1.48
TRMT1-206ENST00000586224 RIMBP3BA6NNM3 1639 aa24.28■■□□□ 1.48
TRMT1-206ENST00000586224 RIMBP3Q9UFD9 1639 aa24.28■■□□□ 1.48
TRMT1-206ENST00000586224 CEP164Q9UPV0 1460 aa24.17■■□□□ 1.46
TRMT1-206ENST00000586224 FANCD2Q9BXW9 1451 aa24.09■■□□□ 1.45
TRMT1-206ENST00000586224 ARHGEF11O15085 1522 aa24.09■■□□□ 1.45
TRMT1-206ENST00000586224 URB2Q14146 1524 aaKnown RBP24.01■■□□□ 1.43
TRMT1-206ENST00000586224 TRHP20396 242 aaPredicted RBP23.95■■□□□ 1.42
TRMT1-206ENST00000586224 CYB5RLQ6IPT4 315 aa23.95■■□□□ 1.42
TRMT1-206ENST00000586224 CCDC88BA6NC98 1476 aa23.91■■□□□ 1.42
TRMT1-206ENST00000586224 ZNF608Q9ULD9 1512 aaPredicted RBP23.89■■□□□ 1.42
TRMT1-206ENST00000586224 CHIC1Q5VXU3 224 aa23.88■■□□□ 1.41
TRMT1-206ENST00000586224 CFTRP13569 1480 aa23.86■■□□□ 1.41
TRMT1-206ENST00000586224 AEBP2Q6ZN18 517 aaPredicted RBP23.85■■□□□ 1.41
TRMT1-206ENST00000586224 ARAP1Q96P48 1450 aa23.83■■□□□ 1.41
TRMT1-206ENST00000586224 IFT140Q96RY7 1462 aa23.68■■□□□ 1.38
TRMT1-206ENST00000586224 CHD1O14646 1710 aa23.68■■□□□ 1.38
TRMT1-206ENST00000586224 EIF4G3O43432 1585 aaKnown RBP23.67■■□□□ 1.38
TRMT1-206ENST00000586224 PRDM2Q13029 1718 aa23.59■■□□□ 1.37
TRMT1-206ENST00000586224 TOPBP1Q92547 1522 aa23.54■■□□□ 1.36
TRMT1-206ENST00000586224 AQRO60306 1485 aaKnown RBP eCLIP23.52■■□□□ 1.363e-6■■■■□ 25.4
TRMT1-206ENST00000586224 FBLN2P98095 1184 aa23.51■■□□□ 1.35
TRMT1-206ENST00000586224 TARBP1Q13395 1621 aaKnown RBP23.42■■□□□ 1.34
TRMT1-206ENST00000586224 ABCC8Q09428 1581 aa23.38■■□□□ 1.33
TRMT1-206ENST00000586224 CLASP1Q7Z460 1538 aa23.35■■□□□ 1.33
TRMT1-206ENST00000586224 DNMBPQ6XZF7 1577 aa23.35■■□□□ 1.33
TRMT1-206ENST00000586224 BIVM-ERCC5R4GMW8 1640 aa23.29■■□□□ 1.32
TRMT1-206ENST00000586224 WRNQ14191 1432 aaPredicted RBP eCLIP23.26■■□□□ 1.31
TRMT1-206ENST00000586224 POLA1P09884 1462 aaPredicted RBP23.26■■□□□ 1.31
TRMT1-206ENST00000586224 RAD54L2Q9Y4B4 1467 aa23.25■■□□□ 1.31
TRMT1-206ENST00000586224 SNAPC4Q5SXM2 1469 aa23.24■■□□□ 1.31
TRMT1-206ENST00000586224 SYNJ1O43426 1573 aa23.24■■□□□ 1.31
TRMT1-206ENST00000586224 TOP2BQ02880 1626 aa23.23■■□□□ 1.31
TRMT1-206ENST00000586224 TDRD9Q8NDG6 1382 aaKnown RBP23.23■■□□□ 1.31
TRMT1-206ENST00000586224 GAPVD1Q14C86 1478 aa23.16■■□□□ 1.3
TRMT1-206ENST00000586224 CHMP7Q8WUX9 453 aaPredicted RBP23.11■■□□□ 1.29
TRMT1-206ENST00000586224 EEA1Q15075 1411 aa23.1■■□□□ 1.29
TRMT1-206ENST00000586224 SOGA1O94964 1423 aa23.08■■□□□ 1.28
TRMT1-206ENST00000586224 ILDR1Q86SU0 546 aaPredicted RBP23.07■■□□□ 1.28
TRMT1-206ENST00000586224 CUX1P39880 1505 aa23.05■■□□□ 1.28
TRMT1-206ENST00000586224 ERCC6L2Q5T890 1561 aa23.05■■□□□ 1.28
TRMT1-206ENST00000586224 MAGI1Q96QZ7 1491 aaPredicted RBP23.04■■□□□ 1.28
TRMT1-206ENST00000586224 SYNJ2O15056 1496 aa23■■□□□ 1.27
TRMT1-206ENST00000586224 FGD5Q6ZNL6 1462 aa22.99■■□□□ 1.27
TRMT1-206ENST00000586224 GRIN2BQ13224 1484 aa22.97■■□□□ 1.27
TRMT1-206ENST00000586224 WDR97A6NE52 1622 aa22.94■■□□□ 1.26
TRMT1-206ENST00000586224 KIF13AQ9H1H9 1805 aa22.94■■□□□ 1.26
TRMT1-206ENST00000586224 PBRM1Q86U86 1689 aa22.89■■□□□ 1.25
TRMT1-206ENST00000586224 KIF21BO75037 1637 aa22.86■■□□□ 1.25
TRMT1-206ENST00000586224 KDM4FA0A1W2PPD8 638 aa22.83■■□□□ 1.25
TRMT1-206ENST00000586224 RUSC2Q8N2Y8 1516 aa22.82■■□□□ 1.24
TRMT1-206ENST00000586224 CEP170Q5SW79 1584 aa22.8■■□□□ 1.24
TRMT1-206ENST00000586224 LOC105371045A0A1W2PR82 267 aa22.78■■□□□ 1.24
TRMT1-206ENST00000586224 ABCA5Q8WWZ7 1642 aa22.72■■□□□ 1.23
TRMT1-206ENST00000586224 GRIN2AQ12879 1464 aa22.72■■□□□ 1.23
TRMT1-206ENST00000586224 CSRNP3Q8WYN3 585 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms