RNA–Protein interactions for RNA: ENST00000586222.1

LDLRAD4-207, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 4

Gene LDLRAD4, Length 685 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-207ENST00000586222 NISCHQ9Y2I1 1504 aa43.45■■■■■ 4.55
LDLRAD4-207ENST00000586222 CCDC180Q9P1Z9 1646 aa38.6■■■■□ 3.77
LDLRAD4-207ENST00000586222 ABCC9O60706 1549 aa38.02■■■■□ 3.68
LDLRAD4-207ENST00000586222 DCAF8L2P0C7V8 631 aa36.34■■■■□ 3.41
LDLRAD4-207ENST00000586222 NACADO15069 1562 aa36.3■■■■□ 3.4
LDLRAD4-207ENST00000586222 RB1CC1Q8TDY2 1594 aa36.3■■■■□ 3.4
LDLRAD4-207ENST00000586222 ZCCHC6Q5VYS8 1495 aaKnown RBP36.22■■■■□ 3.39
LDLRAD4-207ENST00000586222 MYO15BQ96JP2 1530 aa36.13■■■■□ 3.38
LDLRAD4-207ENST00000586222 DCAF1Q9Y4B6 1507 aa36.02■■■■□ 3.36
LDLRAD4-207ENST00000586222 PABPN1Q86U42 306 aaKnown RBP eCLIP35.56■■■■□ 3.28
LDLRAD4-207ENST00000586222 UNC13AQ9UPW8 1703 aa35.4■■■■□ 3.26
LDLRAD4-207ENST00000586222 DNAJC5BQ9UF47 199 aa35.38■■■■□ 3.25
LDLRAD4-207ENST00000586222 BICRAQ9NZM4 1560 aa35.21■■■■□ 3.23
LDLRAD4-207ENST00000586222 SCRIBQ14160 1630 aa35.17■■■■□ 3.22
LDLRAD4-207ENST00000586222 SHROOM4Q9ULL8 1493 aa34.9■■■■□ 3.18
LDLRAD4-207ENST00000586222 EIF4G1Q04637 1599 aaKnown RBP34.32■■■■□ 3.08
LDLRAD4-207ENST00000586222 CC2D2AQ9P2K1 1620 aa34.3■■■■□ 3.08
LDLRAD4-207ENST00000586222 CECR2Q9BXF3 1484 aa34.19■■■■□ 3.06
LDLRAD4-207ENST00000586222 BAZ1AQ9NRL2 1556 aaPredicted RBP33.73■■■□□ 2.99
LDLRAD4-207ENST00000586222 SMARCA4P51532 1647 aa33.68■■■□□ 2.98
LDLRAD4-207ENST00000586222 SMARCA2P51531 1590 aa33.51■■■□□ 2.96
LDLRAD4-207ENST00000586222 ATAD2BQ9ULI0 1458 aa33.47■■■□□ 2.95
LDLRAD4-207ENST00000586222 NCAPD3P42695 1498 aa33.46■■■□□ 2.95
LDLRAD4-207ENST00000586222 MROH2BQ7Z745 1585 aa33.43■■■□□ 2.94
LDLRAD4-207ENST00000586222 PEG3Q9GZU2 1588 aa33.36■■■□□ 2.93
LDLRAD4-207ENST00000586222 HMGXB3Q12766 1538 aa33.31■■■□□ 2.92
LDLRAD4-207ENST00000586222 BAZ1BQ9UIG0 1483 aaKnown RBP33.26■■■□□ 2.92
LDLRAD4-207ENST00000586222 RSF1Q96T23 1441 aaPredicted RBP33.15■■■□□ 2.9
LDLRAD4-207ENST00000586222 WIZO95785 1651 aa33.07■■■□□ 2.88
LDLRAD4-207ENST00000586222 TOP2AP11388 1531 aaKnown RBP32.82■■■□□ 2.84
LDLRAD4-207ENST00000586222 ERCC6Q03468 1493 aa32.8■■■□□ 2.84
LDLRAD4-207ENST00000586222 NESP48681 1621 aa32.77■■■□□ 2.84
LDLRAD4-207ENST00000586222 LAMC3Q9Y6N6 1575 aa32.58■■■□□ 2.81
LDLRAD4-207ENST00000586222 CUX2O14529 1486 aa32.54■■■□□ 2.8
LDLRAD4-207ENST00000586222 CADPSQ9ULU8 1353 aa32.51■■■□□ 2.79
LDLRAD4-207ENST00000586222 SUPT5HO00267 1087 aaKnown RBP32.48■■■□□ 2.79
LDLRAD4-207ENST00000586222 PDS5BQ9NTI5 1447 aa32.42■■■□□ 2.78
LDLRAD4-207ENST00000586222 CCDC88BA6NC98 1476 aa32.39■■■□□ 2.78
LDLRAD4-207ENST00000586222 CFTRP13569 1480 aa32.32■■■□□ 2.76
LDLRAD4-207ENST00000586222 KIF21AQ7Z4S6 1674 aa32.26■■■□□ 2.75
LDLRAD4-207ENST00000586222 THOC2Q8NI27 1593 aaKnown RBP32.24■■■□□ 2.75
LDLRAD4-207ENST00000586222 DNAJC5Q9H3Z4 198 aa32.17■■■□□ 2.74
LDLRAD4-207ENST00000586222 FANCD2Q9BXW9 1451 aa32.12■■■□□ 2.73
LDLRAD4-207ENST00000586222 CEP164Q9UPV0 1460 aa32.1■■■□□ 2.73
LDLRAD4-207ENST00000586222 MRC2Q9UBG0 1479 aa32.06■■■□□ 2.72
LDLRAD4-207ENST00000586222 PRDM2Q13029 1718 aa32.06■■■□□ 2.72
LDLRAD4-207ENST00000586222 WDR62O43379 1518 aa31.92■■■□□ 2.7
LDLRAD4-207ENST00000586222 ABCC8Q09428 1581 aa31.74■■■□□ 2.67
LDLRAD4-207ENST00000586222 URB2Q14146 1524 aaKnown RBP31.74■■■□□ 2.67
LDLRAD4-207ENST00000586222 DNMBPQ6XZF7 1577 aa31.6■■■□□ 2.65
LDLRAD4-207ENST00000586222 TOPBP1Q92547 1522 aa31.59■■■□□ 2.65
LDLRAD4-207ENST00000586222 IFT140Q96RY7 1462 aa31.43■■■□□ 2.62
LDLRAD4-207ENST00000586222 CUX1P39880 1505 aa31.37■■■□□ 2.61
LDLRAD4-207ENST00000586222 POLA1P09884 1462 aaPredicted RBP31.33■■■□□ 2.61
LDLRAD4-207ENST00000586222 WRNQ14191 1432 aaPredicted RBP eCLIP31.32■■■□□ 2.61
LDLRAD4-207ENST00000586222 ZNF608Q9ULD9 1512 aaPredicted RBP31.3■■■□□ 2.6
LDLRAD4-207ENST00000586222 FGD5Q6ZNL6 1462 aa31.29■■■□□ 2.6
LDLRAD4-207ENST00000586222 SOGA1O94964 1423 aa31.27■■■□□ 2.6
LDLRAD4-207ENST00000586222 OSCARQ8IYS5 282 aa31.26■■■□□ 2.59
LDLRAD4-207ENST00000586222 TOP2BQ02880 1626 aa31.19■■■□□ 2.58
LDLRAD4-207ENST00000586222 TARBP1Q13395 1621 aaKnown RBP31.19■■■□□ 2.58
LDLRAD4-207ENST00000586222 RAD54L2Q9Y4B4 1467 aa31.16■■■□□ 2.58
LDLRAD4-207ENST00000586222 BIVM-ERCC5R4GMW8 1640 aa31.16■■■□□ 2.58
LDLRAD4-207ENST00000586222 AQRO60306 1485 aaKnown RBP eCLIP31.12■■■□□ 2.57
LDLRAD4-207ENST00000586222 SYNJ1O43426 1573 aa31.12■■■□□ 2.57
LDLRAD4-207ENST00000586222 WDR97A6NE52 1622 aa31.1■■■□□ 2.57
LDLRAD4-207ENST00000586222 EIF4G3O43432 1585 aaKnown RBP31.07■■■□□ 2.56
LDLRAD4-207ENST00000586222 TDRD9Q8NDG6 1382 aaKnown RBP31.03■■■□□ 2.56
LDLRAD4-207ENST00000586222 ABCA10Q8WWZ4 1543 aa31.01■■■□□ 2.55
LDLRAD4-207ENST00000586222 TRIM41Q8WV44 630 aa30.99■■■□□ 2.55
LDLRAD4-207ENST00000586222 FBLN2P98095 1184 aa30.92■■■□□ 2.54
LDLRAD4-207ENST00000586222 GRIN2BQ13224 1484 aa30.9■■■□□ 2.54
LDLRAD4-207ENST00000586222 GAPVD1Q14C86 1478 aa30.9■■■□□ 2.54
LDLRAD4-207ENST00000586222 ABCA5Q8WWZ7 1642 aa30.83■■■□□ 2.53
LDLRAD4-207ENST00000586222 MAGI1Q96QZ7 1491 aaPredicted RBP30.81■■■□□ 2.52
LDLRAD4-207ENST00000586222 SNAPC4Q5SXM2 1469 aa30.77■■■□□ 2.52
LDLRAD4-207ENST00000586222 CHD1O14646 1710 aa30.76■■■□□ 2.52
LDLRAD4-207ENST00000586222 PBRM1Q86U86 1689 aa30.75■■■□□ 2.51
LDLRAD4-207ENST00000586222 CHMP7Q8WUX9 453 aaPredicted RBP30.73■■■□□ 2.51
LDLRAD4-207ENST00000586222 KIF27Q86VH2 1401 aa30.71■■■□□ 2.51
LDLRAD4-207ENST00000586222 ERICH3Q5RHP9 1530 aa30.68■■■□□ 2.5
LDLRAD4-207ENST00000586222 SYNJ2O15056 1496 aa30.67■■■□□ 2.5
LDLRAD4-207ENST00000586222 RIMBP3CA6NJZ7 1639 aa30.66■■■□□ 2.5
LDLRAD4-207ENST00000586222 RIMBP3BA6NNM3 1639 aa30.66■■■□□ 2.5
LDLRAD4-207ENST00000586222 RIMBP3Q9UFD9 1639 aa30.66■■■□□ 2.5
LDLRAD4-207ENST00000586222 ARHGEF11O15085 1522 aa30.63■■■□□ 2.49
LDLRAD4-207ENST00000586222 FHAD1B1AJZ9 1412 aa30.57■■■□□ 2.48
LDLRAD4-207ENST00000586222 ADAMTS12P58397 1594 aa30.54■■■□□ 2.48
LDLRAD4-207ENST00000586222 CYB5RLQ6IPT4 315 aa30.53■■■□□ 2.48
LDLRAD4-207ENST00000586222 IGF1RP08069 1367 aa30.47■■■□□ 2.47
LDLRAD4-207ENST00000586222 GRIN2AQ12879 1464 aa30.46■■■□□ 2.47
LDLRAD4-207ENST00000586222 CUL7Q14999 1698 aa30.43■■■□□ 2.46
LDLRAD4-207ENST00000586222 CLASP1Q7Z460 1538 aa30.42■■■□□ 2.46
LDLRAD4-207ENST00000586222 ARAP1Q96P48 1450 aa30.36■■■□□ 2.45
LDLRAD4-207ENST00000586222 CHIC1Q5VXU3 224 aa30.35■■■□□ 2.45
LDLRAD4-207ENST00000586222 CARMIL1Q5VZK9 1371 aa30.34■■■□□ 2.45
LDLRAD4-207ENST00000586222 NUP160Q12769 1436 aa30.3■■■□□ 2.44
LDLRAD4-207ENST00000586222 RUSC2Q8N2Y8 1516 aa30.27■■■□□ 2.44
LDLRAD4-207ENST00000586222 EEA1Q15075 1411 aa30.26■■■□□ 2.43
LDLRAD4-207ENST00000586222 CEP170Q5SW79 1584 aa30.24■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 1499.5 ms