RNA–Protein interactions for RNA: ENST00000586215.1

POLR2E-203, Transcript of RNA polymerase II subunit E, humanhuman

TSL 2

Gene POLR2E, Length 756 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-203ENST00000586215 NISCHQ9Y2I1 1504 aa35.93■■■■□ 3.34
POLR2E-203ENST00000586215 ABCC9O60706 1549 aa32.65■■■□□ 2.82
POLR2E-203ENST00000586215 CCDC180Q9P1Z9 1646 aa32.37■■■□□ 2.77
POLR2E-203ENST00000586215 DNAJC5BQ9UF47 199 aa30.98■■■□□ 2.55
POLR2E-203ENST00000586215 RB1CC1Q8TDY2 1594 aa30.9■■■□□ 2.54
POLR2E-203ENST00000586215 NACADO15069 1562 aa30.62■■■□□ 2.49
POLR2E-203ENST00000586215 UNC13AQ9UPW8 1703 aa30.38■■■□□ 2.45
POLR2E-203ENST00000586215 PABPN1Q86U42 306 aaKnown RBP eCLIP30.32■■■□□ 2.44
POLR2E-203ENST00000586215 DCAF8L2P0C7V8 631 aa30.27■■■□□ 2.44
POLR2E-203ENST00000586215 BICRAQ9NZM4 1560 aa30.16■■■□□ 2.42
POLR2E-203ENST00000586215 MYO15BQ96JP2 1530 aa30.13■■■□□ 2.41
POLR2E-203ENST00000586215 ZCCHC6Q5VYS8 1495 aaKnown RBP29.87■■■□□ 2.37
POLR2E-203ENST00000586215 DCAF1Q9Y4B6 1507 aa29.75■■■□□ 2.35
POLR2E-203ENST00000586215 SHROOM4Q9ULL8 1493 aa29.57■■■□□ 2.32
POLR2E-203ENST00000586215 CC2D2AQ9P2K1 1620 aa29.51■■■□□ 2.31
POLR2E-203ENST00000586215 SCRIBQ14160 1630 aa29.49■■■□□ 2.31
POLR2E-203ENST00000586215 CECR2Q9BXF3 1484 aa29.42■■■□□ 2.3
POLR2E-203ENST00000586215 EIF4G1Q04637 1599 aaKnown RBP29.36■■■□□ 2.29
POLR2E-203ENST00000586215 DNAJC5Q9H3Z4 198 aa28.55■■■□□ 2.16
POLR2E-203ENST00000586215 NCAPD3P42695 1498 aa28.3■■■□□ 2.12
POLR2E-203ENST00000586215 CUX2O14529 1486 aa28.22■■■□□ 2.11
POLR2E-203ENST00000586215 ATAD2BQ9ULI0 1458 aa28.19■■■□□ 2.1
POLR2E-203ENST00000586215 ERCC6Q03468 1493 aa28.12■■■□□ 2.09
POLR2E-203ENST00000586215 SMARCA4P51532 1647 aa28.11■■■□□ 2.09
POLR2E-203ENST00000586215 HMGXB3Q12766 1538 aa28.08■■■□□ 2.08
POLR2E-203ENST00000586215 SMARCA2P51531 1590 aa28.04■■■□□ 2.08
POLR2E-203ENST00000586215 NESP48681 1621 aa28.02■■■□□ 2.08
POLR2E-203ENST00000586215 BAZ1AQ9NRL2 1556 aaPredicted RBP27.87■■■□□ 2.05
POLR2E-203ENST00000586215 BAZ1BQ9UIG0 1483 aaKnown RBP27.85■■■□□ 2.05
POLR2E-203ENST00000586215 PEG3Q9GZU2 1588 aa27.85■■■□□ 2.05
POLR2E-203ENST00000586215 THOC2Q8NI27 1593 aaKnown RBP27.82■■■□□ 2.04
POLR2E-203ENST00000586215 MROH2BQ7Z745 1585 aa27.72■■■□□ 2.03
POLR2E-203ENST00000586215 LAMC3Q9Y6N6 1575 aa27.69■■■□□ 2.02
POLR2E-203ENST00000586215 KIF21AQ7Z4S6 1674 aa27.66■■■□□ 2.02
POLR2E-203ENST00000586215 PDS5BQ9NTI5 1447 aa27.48■■□□□ 1.99
POLR2E-203ENST00000586215 CADPSQ9ULU8 1353 aa27.39■■□□□ 1.98
POLR2E-203ENST00000586215 WIZO95785 1651 aa27.38■■□□□ 1.97
POLR2E-203ENST00000586215 MRC2Q9UBG0 1479 aa27.32■■□□□ 1.96
POLR2E-203ENST00000586215 WDR62O43379 1518 aa27.31■■□□□ 1.96
POLR2E-203ENST00000586215 RSF1Q96T23 1441 aaPredicted RBP27.31■■□□□ 1.96
POLR2E-203ENST00000586215 CEP164Q9UPV0 1460 aa27.13■■□□□ 1.93
POLR2E-203ENST00000586215 TRIM41Q8WV44 630 aa27.11■■□□□ 1.93
POLR2E-203ENST00000586215 FANCD2Q9BXW9 1451 aa27.1■■□□□ 1.93
POLR2E-203ENST00000586215 TOP2AP11388 1531 aaKnown RBP27.06■■□□□ 1.92
POLR2E-203ENST00000586215 CFTRP13569 1480 aa27.06■■□□□ 1.92
POLR2E-203ENST00000586215 URB2Q14146 1524 aaKnown RBP26.97■■□□□ 1.91
POLR2E-203ENST00000586215 PRDM2Q13029 1718 aa26.82■■□□□ 1.88
POLR2E-203ENST00000586215 OSCARQ8IYS5 282 aa26.8■■□□□ 1.88
POLR2E-203ENST00000586215 CCDC88BA6NC98 1476 aa26.76■■□□□ 1.87
POLR2E-203ENST00000586215 ZNF608Q9ULD9 1512 aaPredicted RBP26.68■■□□□ 1.86
POLR2E-203ENST00000586215 RIMBP3CA6NJZ7 1639 aa26.65■■□□□ 1.86
POLR2E-203ENST00000586215 RIMBP3BA6NNM3 1639 aa26.65■■□□□ 1.86
POLR2E-203ENST00000586215 RIMBP3Q9UFD9 1639 aa26.65■■□□□ 1.86
POLR2E-203ENST00000586215 IFT140Q96RY7 1462 aa26.61■■□□□ 1.85
POLR2E-203ENST00000586215 TOPBP1Q92547 1522 aa26.59■■□□□ 1.85
POLR2E-203ENST00000586215 SUPT5HO00267 1087 aaKnown RBP26.53■■□□□ 1.84
POLR2E-203ENST00000586215 EIF4G3O43432 1585 aaKnown RBP26.51■■□□□ 1.83
POLR2E-203ENST00000586215 ARHGEF11O15085 1522 aa26.5■■□□□ 1.83
POLR2E-203ENST00000586215 DNMBPQ6XZF7 1577 aa26.45■■□□□ 1.82
POLR2E-203ENST00000586215 TARBP1Q13395 1621 aaKnown RBP26.42■■□□□ 1.82
POLR2E-203ENST00000586215 CHD1O14646 1710 aa26.39■■□□□ 1.82
POLR2E-203ENST00000586215 ABCC8Q09428 1581 aa26.39■■□□□ 1.82
POLR2E-203ENST00000586215 AQRO60306 1485 aaKnown RBP eCLIP26.36■■□□□ 1.811e-7■■■■■ 26.9
POLR2E-203ENST00000586215 POLA1P09884 1462 aaPredicted RBP26.3■■□□□ 1.8
POLR2E-203ENST00000586215 ARAP1Q96P48 1450 aa26.25■■□□□ 1.79
POLR2E-203ENST00000586215 CYB5RLQ6IPT4 315 aa26.22■■□□□ 1.79
POLR2E-203ENST00000586215 RAD54L2Q9Y4B4 1467 aa26.22■■□□□ 1.79
POLR2E-203ENST00000586215 TDRD9Q8NDG6 1382 aaKnown RBP26.12■■□□□ 1.77
POLR2E-203ENST00000586215 FBLN2P98095 1184 aa26.11■■□□□ 1.77
POLR2E-203ENST00000586215 SOGA1O94964 1423 aa26.1■■□□□ 1.77
POLR2E-203ENST00000586215 CLASP1Q7Z460 1538 aa26.09■■□□□ 1.77
POLR2E-203ENST00000586215 SNAPC4Q5SXM2 1469 aa26.08■■□□□ 1.77
POLR2E-203ENST00000586215 FGD5Q6ZNL6 1462 aa26.08■■□□□ 1.77
POLR2E-203ENST00000586215 CUX1P39880 1505 aa26.05■■□□□ 1.76
POLR2E-203ENST00000586215 WDR97A6NE52 1622 aa26.04■■□□□ 1.76
POLR2E-203ENST00000586215 TRHP20396 242 aaPredicted RBP25.97■■□□□ 1.75
POLR2E-203ENST00000586215 MAGI1Q96QZ7 1491 aaPredicted RBP25.97■■□□□ 1.75
POLR2E-203ENST00000586215 SYNJ1O43426 1573 aa25.94■■□□□ 1.74
POLR2E-203ENST00000586215 GRIN2BQ13224 1484 aa25.92■■□□□ 1.74
POLR2E-203ENST00000586215 SYNJ2O15056 1496 aa25.89■■□□□ 1.73
POLR2E-203ENST00000586215 PBRM1Q86U86 1689 aa25.89■■□□□ 1.73
POLR2E-203ENST00000586215 CHMP7Q8WUX9 453 aaPredicted RBP25.87■■□□□ 1.73
POLR2E-203ENST00000586215 ABCA5Q8WWZ7 1642 aa25.81■■□□□ 1.72
POLR2E-203ENST00000586215 GAPVD1Q14C86 1478 aa25.79■■□□□ 1.72
POLR2E-203ENST00000586215 WRNQ14191 1432 aaPredicted RBP eCLIP25.77■■□□□ 1.72
POLR2E-203ENST00000586215 ABCA10Q8WWZ4 1543 aa25.77■■□□□ 1.72
POLR2E-203ENST00000586215 TOP2BQ02880 1626 aa25.71■■□□□ 1.71
POLR2E-203ENST00000586215 ERCC6L2Q5T890 1561 aa25.7■■□□□ 1.71
POLR2E-203ENST00000586215 BIVM-ERCC5R4GMW8 1640 aa25.7■■□□□ 1.7
POLR2E-203ENST00000586215 GRIN2AQ12879 1464 aa25.62■■□□□ 1.69
POLR2E-203ENST00000586215 ADAMTS12P58397 1594 aa25.61■■□□□ 1.69
POLR2E-203ENST00000586215 CEP170Q5SW79 1584 aa25.61■■□□□ 1.69
POLR2E-203ENST00000586215 NUP160Q12769 1436 aa25.57■■□□□ 1.68
POLR2E-203ENST00000586215 SHROOM2Q13796 1616 aa25.54■■□□□ 1.68
POLR2E-203ENST00000586215 FHAD1B1AJZ9 1412 aa25.45■■□□□ 1.66
POLR2E-203ENST00000586215 ERICH3Q5RHP9 1530 aa25.41■■□□□ 1.66
POLR2E-203ENST00000586215 KIF13AQ9H1H9 1805 aa25.39■■□□□ 1.65
POLR2E-203ENST00000586215 AEBP2Q6ZN18 517 aaPredicted RBP25.37■■□□□ 1.65
POLR2E-203ENST00000586215 PRG4Q92954 1404 aaPredicted RBP25.29■■□□□ 1.64
POLR2E-203ENST00000586215 RUSC2Q8N2Y8 1516 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms