RNA–Protein interactions for RNA: ENST00000586210.5

RAD51D-211, Transcript of RAD51 paralog D, humanhuman

TSL 1 (best)

Gene RAD51D, Length 1,194 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51D-211ENST00000586210 NISCHQ9Y2I1 1504 aa47.07■■■■■ 5.13
RAD51D-211ENST00000586210 CCDC180Q9P1Z9 1646 aa42.43■■■■■ 4.38
RAD51D-211ENST00000586210 ABCC9O60706 1549 aa42.14■■■■■ 4.34
RAD51D-211ENST00000586210 RB1CC1Q8TDY2 1594 aa40.23■■■■■ 4.03
RAD51D-211ENST00000586210 NACADO15069 1562 aa39.93■■■■□ 3.98
RAD51D-211ENST00000586210 DCAF8L2P0C7V8 631 aa39.47■■■■□ 3.91
RAD51D-211ENST00000586210 UNC13AQ9UPW8 1703 aa39.47■■■■□ 3.91
RAD51D-211ENST00000586210 MYO15BQ96JP2 1530 aa39.37■■■■□ 3.89
RAD51D-211ENST00000586210 DNAJC5BQ9UF47 199 aa39.17■■■■□ 3.86
RAD51D-211ENST00000586210 ZCCHC6Q5VYS8 1495 aaKnown RBP39.11■■■■□ 3.85
RAD51D-211ENST00000586210 PABPN1Q86U42 306 aaKnown RBP eCLIP39.06■■■■□ 3.84
RAD51D-211ENST00000586210 BICRAQ9NZM4 1560 aa39.02■■■■□ 3.84
RAD51D-211ENST00000586210 DCAF1Q9Y4B6 1507 aa38.91■■■■□ 3.82
RAD51D-211ENST00000586210 SCRIBQ14160 1630 aa38.62■■■■□ 3.77
RAD51D-211ENST00000586210 SHROOM4Q9ULL8 1493 aa38.56■■■■□ 3.76
RAD51D-211ENST00000586210 CC2D2AQ9P2K1 1620 aa38.14■■■■□ 3.7
RAD51D-211ENST00000586210 EIF4G1Q04637 1599 aaKnown RBP38.09■■■■□ 3.69
RAD51D-211ENST00000586210 CECR2Q9BXF3 1484 aa37.94■■■■□ 3.66
RAD51D-211ENST00000586210 SMARCA4P51532 1647 aa36.82■■■■□ 3.49
RAD51D-211ENST00000586210 NCAPD3P42695 1498 aa36.74■■■■□ 3.47
RAD51D-211ENST00000586210 SMARCA2P51531 1590 aa36.7■■■■□ 3.46
RAD51D-211ENST00000586210 ATAD2BQ9ULI0 1458 aa36.69■■■■□ 3.46
RAD51D-211ENST00000586210 HMGXB3Q12766 1538 aa36.66■■■■□ 3.46
RAD51D-211ENST00000586210 BAZ1AQ9NRL2 1556 aaPredicted RBP36.61■■■■□ 3.45
RAD51D-211ENST00000586210 ERCC6Q03468 1493 aa36.43■■■■□ 3.42
RAD51D-211ENST00000586210 BAZ1BQ9UIG0 1483 aaKnown RBP36.43■■■■□ 3.42
RAD51D-211ENST00000586210 PEG3Q9GZU2 1588 aa36.41■■■■□ 3.42
RAD51D-211ENST00000586210 CUX2O14529 1486 aa36.31■■■■□ 3.4
RAD51D-211ENST00000586210 MROH2BQ7Z745 1585 aa36.27■■■■□ 3.4
RAD51D-211ENST00000586210 NESP48681 1621 aa36.22■■■■□ 3.39
RAD51D-211ENST00000586210 LAMC3Q9Y6N6 1575 aa36.06■■■■□ 3.36
RAD51D-211ENST00000586210 THOC2Q8NI27 1593 aaKnown RBP36■■■■□ 3.35
RAD51D-211ENST00000586210 KIF21AQ7Z4S6 1674 aa35.95■■■■□ 3.35
RAD51D-211ENST00000586210 DNAJC5Q9H3Z4 198 aa35.93■■■■□ 3.34
RAD51D-211ENST00000586210 WIZO95785 1651 aa35.93■■■■□ 3.34
RAD51D-211ENST00000586210 PDS5BQ9NTI5 1447 aa35.72■■■■□ 3.31
RAD51D-211ENST00000586210 CADPSQ9ULU8 1353 aa35.6■■■■□ 3.29
RAD51D-211ENST00000586210 MRC2Q9UBG0 1479 aa35.51■■■■□ 3.28
RAD51D-211ENST00000586210 TOP2AP11388 1531 aaKnown RBP35.5■■■■□ 3.27
RAD51D-211ENST00000586210 RSF1Q96T23 1441 aaPredicted RBP35.48■■■■□ 3.27
RAD51D-211ENST00000586210 WDR62O43379 1518 aa35.47■■■■□ 3.27
RAD51D-211ENST00000586210 CEP164Q9UPV0 1460 aa35.41■■■■□ 3.26
RAD51D-211ENST00000586210 FANCD2Q9BXW9 1451 aa35.3■■■■□ 3.24
RAD51D-211ENST00000586210 PRDM2Q13029 1718 aa35.28■■■■□ 3.24
RAD51D-211ENST00000586210 CFTRP13569 1480 aa35.28■■■■□ 3.24
RAD51D-211ENST00000586210 URB2Q14146 1524 aaKnown RBP35.02■■■■□ 3.2
RAD51D-211ENST00000586210 CCDC88BA6NC98 1476 aa34.93■■■■□ 3.18
RAD51D-211ENST00000586210 TOPBP1Q92547 1522 aa34.66■■■■□ 3.14
RAD51D-211ENST00000586210 IFT140Q96RY7 1462 aa34.63■■■■□ 3.13
RAD51D-211ENST00000586210 DNMBPQ6XZF7 1577 aa34.62■■■■□ 3.13
RAD51D-211ENST00000586210 EIF4G3O43432 1585 aaKnown RBP34.56■■■■□ 3.12
RAD51D-211ENST00000586210 ZNF608Q9ULD9 1512 aaPredicted RBP34.55■■■■□ 3.12
RAD51D-211ENST00000586210 ABCC8Q09428 1581 aa34.55■■■■□ 3.12
RAD51D-211ENST00000586210 TRIM41Q8WV44 630 aa34.5■■■■□ 3.11
RAD51D-211ENST00000586210 OSCARQ8IYS5 282 aa34.43■■■■□ 3.1
RAD51D-211ENST00000586210 TARBP1Q13395 1621 aaKnown RBP34.41■■■■□ 3.1
RAD51D-211ENST00000586210 CHD1O14646 1710 aa34.32■■■■□ 3.08
RAD51D-211ENST00000586210 POLA1P09884 1462 aaPredicted RBP34.32■■■■□ 3.08
RAD51D-211ENST00000586210 RIMBP3CA6NJZ7 1639 aa34.28■■■■□ 3.08
RAD51D-211ENST00000586210 RIMBP3BA6NNM3 1639 aa34.28■■■■□ 3.08
RAD51D-211ENST00000586210 RIMBP3Q9UFD9 1639 aa34.28■■■■□ 3.08
RAD51D-211ENST00000586210 AQRO60306 1485 aaKnown RBP eCLIP34.18■■■■□ 3.064e-7■■■■□ 26
RAD51D-211ENST00000586210 ARHGEF11O15085 1522 aa34.14■■■■□ 3.06
RAD51D-211ENST00000586210 FGD5Q6ZNL6 1462 aa34.14■■■■□ 3.06
RAD51D-211ENST00000586210 RAD54L2Q9Y4B4 1467 aa34.13■■■■□ 3.05
RAD51D-211ENST00000586210 WDR97A6NE52 1622 aa34.12■■■■□ 3.05
RAD51D-211ENST00000586210 CUX1P39880 1505 aa34.11■■■■□ 3.05
RAD51D-211ENST00000586210 SOGA1O94964 1423 aa34.04■■■■□ 3.04
RAD51D-211ENST00000586210 SNAPC4Q5SXM2 1469 aa33.97■■■■□ 3.03
RAD51D-211ENST00000586210 TDRD9Q8NDG6 1382 aaKnown RBP33.96■■■■□ 3.03
RAD51D-211ENST00000586210 PBRM1Q86U86 1689 aa33.95■■■■□ 3.03
RAD51D-211ENST00000586210 FBLN2P98095 1184 aa33.88■■■■□ 3.01
RAD51D-211ENST00000586210 SUPT5HO00267 1087 aaKnown RBP33.87■■■■□ 3.01
RAD51D-211ENST00000586210 MAGI1Q96QZ7 1491 aaPredicted RBP33.87■■■■□ 3.01
RAD51D-211ENST00000586210 GRIN2BQ13224 1484 aa33.83■■■■□ 3.01
RAD51D-211ENST00000586210 SYNJ1O43426 1573 aa33.81■■■■□ 3
RAD51D-211ENST00000586210 CLASP1Q7Z460 1538 aa33.81■■■■□ 3
RAD51D-211ENST00000586210 ABCA5Q8WWZ7 1642 aa33.8■■■■□ 3
RAD51D-211ENST00000586210 ARAP1Q96P48 1450 aa33.79■■■■□ 3
RAD51D-211ENST00000586210 SYNJ2O15056 1496 aa33.74■■■□□ 2.99
RAD51D-211ENST00000586210 ABCA10Q8WWZ4 1543 aa33.72■■■□□ 2.99
RAD51D-211ENST00000586210 GAPVD1Q14C86 1478 aa33.71■■■□□ 2.99
RAD51D-211ENST00000586210 BIVM-ERCC5R4GMW8 1640 aa33.71■■■□□ 2.99
RAD51D-211ENST00000586210 CYB5RLQ6IPT4 315 aa33.64■■■□□ 2.98
RAD51D-211ENST00000586210 TOP2BQ02880 1626 aa33.64■■■□□ 2.98
RAD51D-211ENST00000586210 CHMP7Q8WUX9 453 aaPredicted RBP33.63■■■□□ 2.97
RAD51D-211ENST00000586210 ADAMTS12P58397 1594 aa33.56■■■□□ 2.96
RAD51D-211ENST00000586210 WRNQ14191 1432 aaPredicted RBP eCLIP33.54■■■□□ 2.965e-11■■■■■ 40
RAD51D-211ENST00000586210 GRIN2AQ12879 1464 aa33.44■■■□□ 2.94
RAD51D-211ENST00000586210 CEP170Q5SW79 1584 aa33.37■■■□□ 2.93
RAD51D-211ENST00000586210 ERICH3Q5RHP9 1530 aa33.33■■■□□ 2.93
RAD51D-211ENST00000586210 NUP160Q12769 1436 aa33.28■■■□□ 2.92
RAD51D-211ENST00000586210 TRHP20396 242 aaPredicted RBP33.28■■■□□ 2.92
RAD51D-211ENST00000586210 FHAD1B1AJZ9 1412 aa33.28■■■□□ 2.92
RAD51D-211ENST00000586210 ERCC6L2Q5T890 1561 aa33.25■■■□□ 2.91
RAD51D-211ENST00000586210 SHROOM2Q13796 1616 aa33.24■■■□□ 2.91
RAD51D-211ENST00000586210 RUSC2Q8N2Y8 1516 aa33.11■■■□□ 2.89
RAD51D-211ENST00000586210 CUL7Q14999 1698 aa32.99■■■□□ 2.87
RAD51D-211ENST00000586210 PRG4Q92954 1404 aaPredicted RBP32.9■■■□□ 2.86
RAD51D-211ENST00000586210 KIF27Q86VH2 1401 aa32.87■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms