RNA–Protein interactions for RNA: ENST00000586131.5

ERCC2-206, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC2, Length 1,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-206ENST00000586131 NISCHQ9Y2I1 1504 aa49.95■■■■■ 5.59
ERCC2-206ENST00000586131 CCDC180Q9P1Z9 1646 aa44.53■■■■■ 4.72
ERCC2-206ENST00000586131 ABCC9O60706 1549 aa43.67■■■■■ 4.58
ERCC2-206ENST00000586131 RB1CC1Q8TDY2 1594 aa41.97■■■■■ 4.31
ERCC2-206ENST00000586131 DCAF8L2P0C7V8 631 aa41.89■■■■■ 4.3
ERCC2-206ENST00000586131 NACADO15069 1562 aa41.87■■■■■ 4.29
ERCC2-206ENST00000586131 ZCCHC6Q5VYS8 1495 aaKnown RBP41.57■■■■■ 4.25
ERCC2-206ENST00000586131 MYO15BQ96JP2 1530 aa41.53■■■■■ 4.24
ERCC2-206ENST00000586131 DCAF1Q9Y4B6 1507 aa41.31■■■■■ 4.2
ERCC2-206ENST00000586131 UNC13AQ9UPW8 1703 aa41.03■■■■■ 4.16
ERCC2-206ENST00000586131 PABPN1Q86U42 306 aaKnown RBP eCLIP40.77■■■■■ 4.12
ERCC2-206ENST00000586131 BICRAQ9NZM4 1560 aa40.63■■■■■ 4.09
ERCC2-206ENST00000586131 SCRIBQ14160 1630 aa40.62■■■■■ 4.09
ERCC2-206ENST00000586131 SHROOM4Q9ULL8 1493 aa40.23■■■■■ 4.03
ERCC2-206ENST00000586131 DNAJC5BQ9UF47 199 aa40.1■■■■■ 4.01
ERCC2-206ENST00000586131 EIF4G1Q04637 1599 aaKnown RBP39.61■■■■□ 3.93
ERCC2-206ENST00000586131 CC2D2AQ9P2K1 1620 aa39.49■■■■□ 3.91
ERCC2-206ENST00000586131 CECR2Q9BXF3 1484 aa39.24■■■■□ 3.87
ERCC2-206ENST00000586131 SMARCA4P51532 1647 aa38.81■■■■□ 3.8
ERCC2-206ENST00000586131 BAZ1AQ9NRL2 1556 aaPredicted RBP38.76■■■■□ 3.8
ERCC2-206ENST00000586131 SMARCA2P51531 1590 aa38.61■■■■□ 3.77
ERCC2-206ENST00000586131 ATAD2BQ9ULI0 1458 aa38.6■■■■□ 3.77
ERCC2-206ENST00000586131 NCAPD3P42695 1498 aa38.59■■■■□ 3.77
ERCC2-206ENST00000586131 MROH2BQ7Z745 1585 aa38.48■■■■□ 3.75
ERCC2-206ENST00000586131 HMGXB3Q12766 1538 aa38.43■■■■□ 3.74
ERCC2-206ENST00000586131 PEG3Q9GZU2 1588 aa38.4■■■■□ 3.74
ERCC2-206ENST00000586131 BAZ1BQ9UIG0 1483 aaKnown RBP38.34■■■■□ 3.73
ERCC2-206ENST00000586131 WIZO95785 1651 aa38.11■■■■□ 3.69
ERCC2-206ENST00000586131 RSF1Q96T23 1441 aaPredicted RBP37.99■■■■□ 3.67
ERCC2-206ENST00000586131 NESP48681 1621 aa37.72■■■■□ 3.63
ERCC2-206ENST00000586131 ERCC6Q03468 1493 aa37.71■■■■□ 3.63
ERCC2-206ENST00000586131 TOP2AP11388 1531 aaKnown RBP37.69■■■■□ 3.62
ERCC2-206ENST00000586131 LAMC3Q9Y6N6 1575 aa37.66■■■■□ 3.62
ERCC2-206ENST00000586131 CADPSQ9ULU8 1353 aa37.48■■■■□ 3.59
ERCC2-206ENST00000586131 PDS5BQ9NTI5 1447 aa37.41■■■■□ 3.58
ERCC2-206ENST00000586131 KIF21AQ7Z4S6 1674 aa37.33■■■■□ 3.57
ERCC2-206ENST00000586131 CUX2O14529 1486 aa37.3■■■■□ 3.56
ERCC2-206ENST00000586131 CCDC88BA6NC98 1476 aa37.22■■■■□ 3.55
ERCC2-206ENST00000586131 CFTRP13569 1480 aa37.21■■■■□ 3.55
ERCC2-206ENST00000586131 THOC2Q8NI27 1593 aaKnown RBP37.19■■■■□ 3.54
ERCC2-206ENST00000586131 FANCD2Q9BXW9 1451 aa37.07■■■■□ 3.52
ERCC2-206ENST00000586131 CEP164Q9UPV0 1460 aa37.07■■■■□ 3.52
ERCC2-206ENST00000586131 PRDM2Q13029 1718 aa37.04■■■■□ 3.52
ERCC2-206ENST00000586131 SUPT5HO00267 1087 aaKnown RBP37.02■■■■□ 3.52
ERCC2-206ENST00000586131 MRC2Q9UBG0 1479 aa37.01■■■■□ 3.52
ERCC2-206ENST00000586131 WDR62O43379 1518 aa36.88■■■■□ 3.49
ERCC2-206ENST00000586131 URB2Q14146 1524 aaKnown RBP36.68■■■■□ 3.46
ERCC2-206ENST00000586131 ABCC8Q09428 1581 aa36.49■■■■□ 3.43
ERCC2-206ENST00000586131 TOPBP1Q92547 1522 aa36.45■■■■□ 3.43
ERCC2-206ENST00000586131 DNMBPQ6XZF7 1577 aa36.43■■■■□ 3.42
ERCC2-206ENST00000586131 IFT140Q96RY7 1462 aa36.27■■■■□ 3.4
ERCC2-206ENST00000586131 DNAJC5Q9H3Z4 198 aa36.27■■■■□ 3.4
ERCC2-206ENST00000586131 POLA1P09884 1462 aaPredicted RBP36.12■■■■□ 3.37
ERCC2-206ENST00000586131 CUX1P39880 1505 aa36.12■■■■□ 3.37
ERCC2-206ENST00000586131 ZNF608Q9ULD9 1512 aaPredicted RBP36.08■■■■□ 3.37
ERCC2-206ENST00000586131 TARBP1Q13395 1621 aaKnown RBP36.06■■■■□ 3.36
ERCC2-206ENST00000586131 FGD5Q6ZNL6 1462 aa36.05■■■■□ 3.36
ERCC2-206ENST00000586131 SOGA1O94964 1423 aa36■■■■□ 3.35
ERCC2-206ENST00000586131 EIF4G3O43432 1585 aaKnown RBP35.99■■■■□ 3.35
ERCC2-206ENST00000586131 RAD54L2Q9Y4B4 1467 aa35.98■■■■□ 3.35
ERCC2-206ENST00000586131 AQRO60306 1485 aaKnown RBP eCLIP35.88■■■■□ 3.337e-11■■■■■ 54.3
ERCC2-206ENST00000586131 WRNQ14191 1432 aaPredicted RBP eCLIP35.87■■■■□ 3.33
ERCC2-206ENST00000586131 WDR97A6NE52 1622 aa35.81■■■■□ 3.32
ERCC2-206ENST00000586131 TOP2BQ02880 1626 aa35.81■■■■□ 3.32
ERCC2-206ENST00000586131 BIVM-ERCC5R4GMW8 1640 aa35.81■■■■□ 3.32
ERCC2-206ENST00000586131 TDRD9Q8NDG6 1382 aaKnown RBP35.8■■■■□ 3.32
ERCC2-206ENST00000586131 SYNJ1O43426 1573 aa35.78■■■■□ 3.32
ERCC2-206ENST00000586131 OSCARQ8IYS5 282 aa35.75■■■■□ 3.31
ERCC2-206ENST00000586131 ABCA10Q8WWZ4 1543 aa35.67■■■■□ 3.3
ERCC2-206ENST00000586131 GRIN2BQ13224 1484 aa35.6■■■■□ 3.29
ERCC2-206ENST00000586131 CHD1O14646 1710 aa35.6■■■■□ 3.29
ERCC2-206ENST00000586131 GAPVD1Q14C86 1478 aa35.59■■■■□ 3.29
ERCC2-206ENST00000586131 PBRM1Q86U86 1689 aa35.57■■■■□ 3.28
ERCC2-206ENST00000586131 SNAPC4Q5SXM2 1469 aa35.57■■■■□ 3.28
ERCC2-206ENST00000586131 FBLN2P98095 1184 aa35.56■■■■□ 3.28
ERCC2-206ENST00000586131 ABCA5Q8WWZ7 1642 aa35.55■■■■□ 3.28
ERCC2-206ENST00000586131 MAGI1Q96QZ7 1491 aaPredicted RBP35.53■■■■□ 3.28
ERCC2-206ENST00000586131 CHMP7Q8WUX9 453 aaPredicted RBP35.42■■■■□ 3.26
ERCC2-206ENST00000586131 SYNJ2O15056 1496 aa35.39■■■■□ 3.26
ERCC2-206ENST00000586131 ERICH3Q5RHP9 1530 aa35.27■■■■□ 3.24
ERCC2-206ENST00000586131 ADAMTS12P58397 1594 aa35.23■■■■□ 3.23
ERCC2-206ENST00000586131 RIMBP3CA6NJZ7 1639 aa35.19■■■■□ 3.22
ERCC2-206ENST00000586131 RIMBP3BA6NNM3 1639 aa35.19■■■■□ 3.22
ERCC2-206ENST00000586131 RIMBP3Q9UFD9 1639 aa35.19■■■■□ 3.22
ERCC2-206ENST00000586131 FHAD1B1AJZ9 1412 aa35.16■■■■□ 3.22
ERCC2-206ENST00000586131 ARHGEF11O15085 1522 aa35.15■■■■□ 3.22
ERCC2-206ENST00000586131 KIF27Q86VH2 1401 aa35.15■■■■□ 3.22
ERCC2-206ENST00000586131 GRIN2AQ12879 1464 aa35.14■■■■□ 3.22
ERCC2-206ENST00000586131 CLASP1Q7Z460 1538 aa35.13■■■■□ 3.21
ERCC2-206ENST00000586131 TRIM41Q8WV44 630 aa35.11■■■■□ 3.21
ERCC2-206ENST00000586131 CUL7Q14999 1698 aa34.97■■■■□ 3.19
ERCC2-206ENST00000586131 CEP170Q5SW79 1584 aa34.96■■■■□ 3.19
ERCC2-206ENST00000586131 IGF1RP08069 1367 aa34.95■■■■□ 3.19
ERCC2-206ENST00000586131 NUP160Q12769 1436 aa34.95■■■■□ 3.19
ERCC2-206ENST00000586131 CYB5RLQ6IPT4 315 aa34.85■■■■□ 3.17
ERCC2-206ENST00000586131 ARAP1Q96P48 1450 aa34.84■■■■□ 3.17
ERCC2-206ENST00000586131 CARMIL1Q5VZK9 1371 aa34.79■■■■□ 3.16
ERCC2-206ENST00000586131 RUSC2Q8N2Y8 1516 aa34.73■■■■□ 3.15
ERCC2-206ENST00000586131 SHROOM2Q13796 1616 aa34.73■■■■□ 3.15
ERCC2-206ENST00000586131 ERCC6L2Q5T890 1561 aa34.63■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms