RNA–Protein interactions for RNA: ENST00000586127.6

GFAP-208, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-208ENST00000586127 NISCHQ9Y2I1 1504 aa39.83■■■■□ 3.97
GFAP-208ENST00000586127 CCDC180Q9P1Z9 1646 aa34.84■■■■□ 3.17
GFAP-208ENST00000586127 ZCCHC6Q5VYS8 1495 aaKnown RBP33.46■■■□□ 2.95
GFAP-208ENST00000586127 ABCC9O60706 1549 aa33.02■■■□□ 2.88
GFAP-208ENST00000586127 DCAF1Q9Y4B6 1507 aa32.9■■■□□ 2.86
GFAP-208ENST00000586127 DCAF8L2P0C7V8 631 aa32.82■■■□□ 2.84
GFAP-208ENST00000586127 MYO15BQ96JP2 1530 aa32.53■■■□□ 2.8
GFAP-208ENST00000586127 SHROOM4Q9ULL8 1493 aa32.43■■■□□ 2.78
GFAP-208ENST00000586127 NACADO15069 1562 aa32.4■■■□□ 2.78
GFAP-208ENST00000586127 RB1CC1Q8TDY2 1594 aa32.17■■■□□ 2.74
GFAP-208ENST00000586127 SCRIBQ14160 1630 aa32.05■■■□□ 2.72
GFAP-208ENST00000586127 UNC13AQ9UPW8 1703 aa31.69■■■□□ 2.66
GFAP-208ENST00000586127 BICRAQ9NZM4 1560 aa31.29■■■□□ 2.6
GFAP-208ENST00000586127 PABPN1Q86U42 306 aaKnown RBP eCLIP31.06■■■□□ 2.56
GFAP-208ENST00000586127 SUPT5HO00267 1087 aaKnown RBP31.06■■■□□ 2.56
GFAP-208ENST00000586127 CECR2Q9BXF3 1484 aa31■■■□□ 2.55
GFAP-208ENST00000586127 RSF1Q96T23 1441 aaPredicted RBP30.84■■■□□ 2.53
GFAP-208ENST00000586127 MROH2BQ7Z745 1585 aa30.81■■■□□ 2.52
GFAP-208ENST00000586127 BAZ1AQ9NRL2 1556 aaPredicted RBP30.75■■■□□ 2.51
GFAP-208ENST00000586127 SMARCA4P51532 1647 aa30.69■■■□□ 2.5
GFAP-208ENST00000586127 WIZO95785 1651 aa30.6■■■□□ 2.49
GFAP-208ENST00000586127 EIF4G1Q04637 1599 aaKnown RBP30.31■■■□□ 2.44
GFAP-208ENST00000586127 PEG3Q9GZU2 1588 aa30.29■■■□□ 2.44
GFAP-208ENST00000586127 TOP2AP11388 1531 aaKnown RBP30.22■■■□□ 2.43
GFAP-208ENST00000586127 ATAD2BQ9ULI0 1458 aa30.16■■■□□ 2.42
GFAP-208ENST00000586127 SMARCA2P51531 1590 aa30.13■■■□□ 2.41
GFAP-208ENST00000586127 BAZ1BQ9UIG0 1483 aaKnown RBP29.98■■■□□ 2.39
GFAP-208ENST00000586127 CC2D2AQ9P2K1 1620 aa29.91■■■□□ 2.38
GFAP-208ENST00000586127 HMGXB3Q12766 1538 aa29.89■■■□□ 2.37
GFAP-208ENST00000586127 CCDC88BA6NC98 1476 aa29.89■■■□□ 2.37
GFAP-208ENST00000586127 NCAPD3P42695 1498 aa29.88■■■□□ 2.37
GFAP-208ENST00000586127 CHIC1Q5VXU3 224 aa29.67■■■□□ 2.34
GFAP-208ENST00000586127 ABCC8Q09428 1581 aa29.29■■■□□ 2.28
GFAP-208ENST00000586127 CFTRP13569 1480 aa29.21■■■□□ 2.27
GFAP-208ENST00000586127 DNAJC5BQ9UF47 199 aa29.2■■■□□ 2.26
GFAP-208ENST00000586127 PRDM2Q13029 1718 aa29.19■■■□□ 2.26
GFAP-208ENST00000586127 TRIM41Q8WV44 630 aa29.16■■■□□ 2.26
GFAP-208ENST00000586127 CADPSQ9ULU8 1353 aa29.09■■■□□ 2.25
GFAP-208ENST00000586127 SYNJ1O43426 1573 aa29.01■■■□□ 2.23
GFAP-208ENST00000586127 WRNQ14191 1432 aaPredicted RBP eCLIP29.01■■■□□ 2.23
GFAP-208ENST00000586127 NESP48681 1621 aa28.99■■■□□ 2.23
GFAP-208ENST00000586127 LAMC3Q9Y6N6 1575 aa28.92■■■□□ 2.22
GFAP-208ENST00000586127 BIVM-ERCC5R4GMW8 1640 aa28.86■■■□□ 2.21
GFAP-208ENST00000586127 TOP2BQ02880 1626 aa28.85■■■□□ 2.21
GFAP-208ENST00000586127 CUX1P39880 1505 aa28.82■■■□□ 2.2
GFAP-208ENST00000586127 FANCD2Q9BXW9 1451 aa28.82■■■□□ 2.2
GFAP-208ENST00000586127 KIF21AQ7Z4S6 1674 aa28.7■■■□□ 2.19
GFAP-208ENST00000586127 FAM9AQ8IZU1 332 aaPredicted RBP28.69■■■□□ 2.18
GFAP-208ENST00000586127 SOGA1O94964 1423 aa28.65■■■□□ 2.18
GFAP-208ENST00000586127 CEP164Q9UPV0 1460 aa28.65■■■□□ 2.18
GFAP-208ENST00000586127 PDS5BQ9NTI5 1447 aa28.63■■■□□ 2.17
GFAP-208ENST00000586127 RUSC2Q8N2Y8 1516 aa28.59■■■□□ 2.17
GFAP-208ENST00000586127 DNMBPQ6XZF7 1577 aa28.57■■■□□ 2.16
GFAP-208ENST00000586127 LOC105371045A0A1W2PR82 267 aa28.56■■■□□ 2.16
GFAP-208ENST00000586127 URB2Q14146 1524 aaKnown RBP28.52■■■□□ 2.16
GFAP-208ENST00000586127 TOPBP1Q92547 1522 aa28.52■■■□□ 2.16
GFAP-208ENST00000586127 FGD5Q6ZNL6 1462 aa28.5■■■□□ 2.15
GFAP-208ENST00000586127 EEA1Q15075 1411 aa28.48■■■□□ 2.15
GFAP-208ENST00000586127 POLA1P09884 1462 aaPredicted RBP28.37■■■□□ 2.13
GFAP-208ENST00000586127 MRC2Q9UBG0 1479 aa28.34■■■□□ 2.13
GFAP-208ENST00000586127 EHMT2Q96KQ7 1210 aa28.33■■■□□ 2.13
GFAP-208ENST00000586127 CSRNP3Q8WYN3 585 aa28.32■■■□□ 2.12
GFAP-208ENST00000586127 RAD54L2Q9Y4B4 1467 aa28.29■■■□□ 2.12
GFAP-208ENST00000586127 ERCC6Q03468 1493 aa28.27■■■□□ 2.12
GFAP-208ENST00000586127 WDR97A6NE52 1622 aa28.26■■■□□ 2.11
GFAP-208ENST00000586127 CUX2O14529 1486 aa28.26■■■□□ 2.11
GFAP-208ENST00000586127 KIF27Q86VH2 1401 aa28.25■■■□□ 2.11
GFAP-208ENST00000586127 KIF21BO75037 1637 aa28.24■■■□□ 2.11
GFAP-208ENST00000586127 WDR62O43379 1518 aa28.24■■■□□ 2.11
GFAP-208ENST00000586127 THOC2Q8NI27 1593 aaKnown RBP28.23■■■□□ 2.11
GFAP-208ENST00000586127 ABCA10Q8WWZ4 1543 aa28.21■■■□□ 2.11
GFAP-208ENST00000586127 TARBP1Q13395 1621 aaKnown RBP28.15■■■□□ 2.1
GFAP-208ENST00000586127 GOLGA3Q08378 1498 aa28.14■■■□□ 2.09
GFAP-208ENST00000586127 PRXQ9BXM0 1461 aa28.08■■■□□ 2.09
GFAP-208ENST00000586127 RAPGEF2Q9Y4G8 1499 aa28.08■■■□□ 2.09
GFAP-208ENST00000586127 ABCA5Q8WWZ7 1642 aa28.08■■■□□ 2.09
GFAP-208ENST00000586127 ERICH3Q5RHP9 1530 aa28.03■■■□□ 2.08
GFAP-208ENST00000586127 IGF1RP08069 1367 aa28.02■■■□□ 2.08
GFAP-208ENST00000586127 TNIKQ9UKE5 1360 aa27.99■■■□□ 2.07
GFAP-208ENST00000586127 TDRD9Q8NDG6 1382 aaKnown RBP27.97■■■□□ 2.07
GFAP-208ENST00000586127 UBTFP17480 764 aaKnown RBP27.94■■■□□ 2.06
GFAP-208ENST00000586127 IFT140Q96RY7 1462 aa27.94■■■□□ 2.06
GFAP-208ENST00000586127 GAPVD1Q14C86 1478 aa27.93■■■□□ 2.06
GFAP-208ENST00000586127 PBRM1Q86U86 1689 aa27.91■■■□□ 2.06
GFAP-208ENST00000586127 CUL7Q14999 1698 aa27.9■■■□□ 2.06
GFAP-208ENST00000586127 CEP162Q5TB80 1403 aa27.89■■■□□ 2.06
GFAP-208ENST00000586127 ZNF608Q9ULD9 1512 aaPredicted RBP27.87■■■□□ 2.05
GFAP-208ENST00000586127 CARMIL1Q5VZK9 1371 aa27.87■■■□□ 2.05
GFAP-208ENST00000586127 AQRO60306 1485 aaKnown RBP eCLIP27.84■■■□□ 2.05
GFAP-208ENST00000586127 EIF4G3O43432 1585 aaKnown RBP27.82■■■□□ 2.04
GFAP-208ENST00000586127 GRIN2BQ13224 1484 aa27.71■■■□□ 2.03
GFAP-208ENST00000586127 ADAMTS12P58397 1594 aa27.71■■■□□ 2.03
GFAP-208ENST00000586127 CLIP1P30622 1438 aa27.67■■■□□ 2.02
GFAP-208ENST00000586127 CTTNBP2Q8WZ74 1663 aa27.64■■■□□ 2.02
GFAP-208ENST00000586127 SNAPC4Q5SXM2 1469 aa27.6■■■□□ 2.01
GFAP-208ENST00000586127 FHAD1B1AJZ9 1412 aa27.6■■■□□ 2.01
GFAP-208ENST00000586127 RANGAP1P46060 587 aaPredicted RBP27.59■■■□□ 2.01
GFAP-208ENST00000586127 MAGI1Q96QZ7 1491 aaPredicted RBP27.5■■□□□ 1.99
GFAP-208ENST00000586127 ARAP1Q96P48 1450 aa27.5■■□□□ 1.99
GFAP-208ENST00000586127 ARHGAP35Q9NRY4 1499 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms