RNA–Protein interactions for RNA: ENST00000586074.1

PCSK4-204, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 3

Gene PCSK4, Length 537 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-204ENST00000586074 NISCHQ9Y2I1 1504 aa47.74■■■■■ 5.23
PCSK4-204ENST00000586074 CCDC180Q9P1Z9 1646 aa42.93■■■■■ 4.46
PCSK4-204ENST00000586074 ABCC9O60706 1549 aa42.87■■■■■ 4.45
PCSK4-204ENST00000586074 RB1CC1Q8TDY2 1594 aa40.86■■■■■ 4.13
PCSK4-204ENST00000586074 NACADO15069 1562 aa40.57■■■■■ 4.09
PCSK4-204ENST00000586074 DCAF8L2P0C7V8 631 aa40.21■■■■■ 4.03
PCSK4-204ENST00000586074 DNAJC5BQ9UF47 199 aa40.12■■■■■ 4.01
PCSK4-204ENST00000586074 MYO15BQ96JP2 1530 aa40.03■■■■■ 4
PCSK4-204ENST00000586074 UNC13AQ9UPW8 1703 aa39.85■■■■□ 3.97
PCSK4-204ENST00000586074 PABPN1Q86U42 306 aaKnown RBP eCLIP39.84■■■■□ 3.97
PCSK4-204ENST00000586074 BICRAQ9NZM4 1560 aa39.6■■■■□ 3.93
PCSK4-204ENST00000586074 ZCCHC6Q5VYS8 1495 aaKnown RBP39.59■■■■□ 3.93
PCSK4-204ENST00000586074 DCAF1Q9Y4B6 1507 aa39.49■■■■□ 3.91
PCSK4-204ENST00000586074 SHROOM4Q9ULL8 1493 aa39.23■■■■□ 3.87
PCSK4-204ENST00000586074 SCRIBQ14160 1630 aa39.06■■■■□ 3.84
PCSK4-204ENST00000586074 CC2D2AQ9P2K1 1620 aa38.74■■■■□ 3.79
PCSK4-204ENST00000586074 EIF4G1Q04637 1599 aaKnown RBP38.67■■■■□ 3.78
PCSK4-204ENST00000586074 CECR2Q9BXF3 1484 aa38.65■■■■□ 3.78
PCSK4-204ENST00000586074 NCAPD3P42695 1498 aa37.42■■■■□ 3.58
PCSK4-204ENST00000586074 ATAD2BQ9ULI0 1458 aa37.29■■■■□ 3.56
PCSK4-204ENST00000586074 SMARCA4P51532 1647 aa37.26■■■■□ 3.56
PCSK4-204ENST00000586074 SMARCA2P51531 1590 aa37.25■■■■□ 3.55
PCSK4-204ENST00000586074 HMGXB3Q12766 1538 aa37.19■■■■□ 3.54
PCSK4-204ENST00000586074 BAZ1AQ9NRL2 1556 aaPredicted RBP37.11■■■■□ 3.53
PCSK4-204ENST00000586074 ERCC6Q03468 1493 aa37.08■■■■□ 3.53
PCSK4-204ENST00000586074 CUX2O14529 1486 aa37.05■■■■□ 3.52
PCSK4-204ENST00000586074 BAZ1BQ9UIG0 1483 aaKnown RBP36.96■■■■□ 3.51
PCSK4-204ENST00000586074 DNAJC5Q9H3Z4 198 aa36.95■■■■□ 3.51
PCSK4-204ENST00000586074 PEG3Q9GZU2 1588 aa36.93■■■■□ 3.5
PCSK4-204ENST00000586074 NESP48681 1621 aa36.78■■■■□ 3.48
PCSK4-204ENST00000586074 MROH2BQ7Z745 1585 aa36.75■■■■□ 3.47
PCSK4-204ENST00000586074 LAMC3Q9Y6N6 1575 aa36.62■■■■□ 3.45
PCSK4-204ENST00000586074 THOC2Q8NI27 1593 aaKnown RBP36.5■■■■□ 3.43
PCSK4-204ENST00000586074 PDS5BQ9NTI5 1447 aa36.41■■■■□ 3.42
PCSK4-204ENST00000586074 KIF21AQ7Z4S6 1674 aa36.35■■■■□ 3.41
PCSK4-204ENST00000586074 WIZO95785 1651 aa36.3■■■■□ 3.4
PCSK4-204ENST00000586074 CADPSQ9ULU8 1353 aa36.27■■■■□ 3.4
PCSK4-204ENST00000586074 MRC2Q9UBG0 1479 aa36.1■■■■□ 3.37
PCSK4-204ENST00000586074 WDR62O43379 1518 aa36.01■■■■□ 3.36
PCSK4-204ENST00000586074 RSF1Q96T23 1441 aaPredicted RBP35.98■■■■□ 3.35
PCSK4-204ENST00000586074 CEP164Q9UPV0 1460 aa35.95■■■■□ 3.35
PCSK4-204ENST00000586074 TOP2AP11388 1531 aaKnown RBP35.92■■■■□ 3.34
PCSK4-204ENST00000586074 FANCD2Q9BXW9 1451 aa35.88■■■■□ 3.33
PCSK4-204ENST00000586074 CFTRP13569 1480 aa35.86■■■■□ 3.33
PCSK4-204ENST00000586074 URB2Q14146 1524 aaKnown RBP35.57■■■■□ 3.28
PCSK4-204ENST00000586074 PRDM2Q13029 1718 aa35.53■■■■□ 3.28
PCSK4-204ENST00000586074 CCDC88BA6NC98 1476 aa35.44■■■■□ 3.26
PCSK4-204ENST00000586074 TRIM41Q8WV44 630 aa35.31■■■■□ 3.24
PCSK4-204ENST00000586074 OSCARQ8IYS5 282 aa35.26■■■■□ 3.24
PCSK4-204ENST00000586074 IFT140Q96RY7 1462 aa35.23■■■■□ 3.23
PCSK4-204ENST00000586074 TOPBP1Q92547 1522 aa35.19■■■■□ 3.22
PCSK4-204ENST00000586074 ABCC8Q09428 1581 aa35.16■■■■□ 3.22
PCSK4-204ENST00000586074 ZNF608Q9ULD9 1512 aaPredicted RBP35.11■■■■□ 3.21
PCSK4-204ENST00000586074 DNMBPQ6XZF7 1577 aa35.08■■■■□ 3.21
PCSK4-204ENST00000586074 EIF4G3O43432 1585 aaKnown RBP34.98■■■■□ 3.19
PCSK4-204ENST00000586074 TARBP1Q13395 1621 aaKnown RBP34.87■■■■□ 3.17
PCSK4-204ENST00000586074 RIMBP3CA6NJZ7 1639 aa34.84■■■■□ 3.17
PCSK4-204ENST00000586074 RIMBP3BA6NNM3 1639 aa34.84■■■■□ 3.17
PCSK4-204ENST00000586074 RIMBP3Q9UFD9 1639 aa34.84■■■■□ 3.17
PCSK4-204ENST00000586074 POLA1P09884 1462 aaPredicted RBP34.83■■■■□ 3.17
PCSK4-204ENST00000586074 AQRO60306 1485 aaKnown RBP eCLIP34.77■■■■□ 3.161e-7■■■□□ 17.9
PCSK4-204ENST00000586074 ARHGEF11O15085 1522 aa34.74■■■■□ 3.15
PCSK4-204ENST00000586074 CHD1O14646 1710 aa34.69■■■■□ 3.14
PCSK4-204ENST00000586074 RAD54L2Q9Y4B4 1467 aa34.65■■■■□ 3.14
PCSK4-204ENST00000586074 SOGA1O94964 1423 aa34.64■■■■□ 3.14
PCSK4-204ENST00000586074 WDR97A6NE52 1622 aa34.62■■■■□ 3.13
PCSK4-204ENST00000586074 FGD5Q6ZNL6 1462 aa34.6■■■■□ 3.13
PCSK4-204ENST00000586074 TDRD9Q8NDG6 1382 aaKnown RBP34.55■■■■□ 3.12
PCSK4-204ENST00000586074 FBLN2P98095 1184 aa34.55■■■■□ 3.12
PCSK4-204ENST00000586074 CUX1P39880 1505 aa34.55■■■■□ 3.12
PCSK4-204ENST00000586074 SNAPC4Q5SXM2 1469 aa34.48■■■■□ 3.11
PCSK4-204ENST00000586074 MAGI1Q96QZ7 1491 aaPredicted RBP34.43■■■■□ 3.1
PCSK4-204ENST00000586074 CYB5RLQ6IPT4 315 aa34.41■■■■□ 3.1
PCSK4-204ENST00000586074 GRIN2BQ13224 1484 aa34.39■■■■□ 3.1
PCSK4-204ENST00000586074 ARAP1Q96P48 1450 aa34.39■■■■□ 3.1
PCSK4-204ENST00000586074 SYNJ1O43426 1573 aa34.33■■■■□ 3.09
PCSK4-204ENST00000586074 CLASP1Q7Z460 1538 aa34.32■■■■□ 3.08
PCSK4-204ENST00000586074 CHMP7Q8WUX9 453 aaPredicted RBP34.32■■■■□ 3.08
PCSK4-204ENST00000586074 SUPT5HO00267 1087 aaKnown RBP34.3■■■■□ 3.08
PCSK4-204ENST00000586074 SYNJ2O15056 1496 aa34.29■■■■□ 3.08
PCSK4-204ENST00000586074 GAPVD1Q14C86 1478 aa34.25■■■■□ 3.07
PCSK4-204ENST00000586074 PBRM1Q86U86 1689 aa34.25■■■■□ 3.07
PCSK4-204ENST00000586074 ABCA10Q8WWZ4 1543 aa34.23■■■■□ 3.07
PCSK4-204ENST00000586074 ABCA5Q8WWZ7 1642 aa34.19■■■■□ 3.06
PCSK4-204ENST00000586074 WRNQ14191 1432 aaPredicted RBP eCLIP34.09■■■■□ 3.05
PCSK4-204ENST00000586074 TRHP20396 242 aaPredicted RBP34.07■■■■□ 3.04
PCSK4-204ENST00000586074 TOP2BQ02880 1626 aa34.02■■■■□ 3.04
PCSK4-204ENST00000586074 BIVM-ERCC5R4GMW8 1640 aa34.02■■■■□ 3.04
PCSK4-204ENST00000586074 GRIN2AQ12879 1464 aa33.95■■■■□ 3.03
PCSK4-204ENST00000586074 ADAMTS12P58397 1594 aa33.95■■■■□ 3.03
PCSK4-204ENST00000586074 FHAD1B1AJZ9 1412 aa33.84■■■■□ 3.01
PCSK4-204ENST00000586074 NUP160Q12769 1436 aa33.83■■■■□ 3.01
PCSK4-204ENST00000586074 ERICH3Q5RHP9 1530 aa33.82■■■■□ 3
PCSK4-204ENST00000586074 CEP170Q5SW79 1584 aa33.81■■■■□ 3
PCSK4-204ENST00000586074 ERCC6L2Q5T890 1561 aa33.71■■■□□ 2.99
PCSK4-204ENST00000586074 SHROOM2Q13796 1616 aa33.69■■■□□ 2.98
PCSK4-204ENST00000586074 PRG4Q92954 1404 aaPredicted RBP33.48■■■□□ 2.95
PCSK4-204ENST00000586074 RUSC2Q8N2Y8 1516 aa33.48■■■□□ 2.95
PCSK4-204ENST00000586074 JPH4Q96JJ6 628 aa33.42■■■□□ 2.94
PCSK4-204ENST00000586074 KIF27Q86VH2 1401 aa33.36■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 290.6 ms