RNA–Protein interactions for RNA: ENST00000586059.5

CNN1-204, Transcript of calponin 1, humanhuman

TSL 3

Gene CNN1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-204ENST00000586059 NISCHQ9Y2I1 1504 aa29.12■■■□□ 2.25
CNN1-204ENST00000586059 CCDC180Q9P1Z9 1646 aa25.92■■□□□ 1.74
CNN1-204ENST00000586059 ABCC9O60706 1549 aa25.2■■□□□ 1.62
CNN1-204ENST00000586059 ZCCHC6Q5VYS8 1495 aaKnown RBP24.31■■□□□ 1.48
CNN1-204ENST00000586059 RB1CC1Q8TDY2 1594 aa24.3■■□□□ 1.48
CNN1-204ENST00000586059 NACADO15069 1562 aa24.28■■□□□ 1.48
CNN1-204ENST00000586059 DCAF8L2P0C7V8 631 aa24.25■■□□□ 1.47
CNN1-204ENST00000586059 MYO15BQ96JP2 1530 aa24.14■■□□□ 1.45
CNN1-204ENST00000586059 DCAF1Q9Y4B6 1507 aa24.09■■□□□ 1.45
CNN1-204ENST00000586059 UNC13AQ9UPW8 1703 aa23.85■■□□□ 1.41
CNN1-204ENST00000586059 SCRIBQ14160 1630 aa23.67■■□□□ 1.38
CNN1-204ENST00000586059 BICRAQ9NZM4 1560 aa23.56■■□□□ 1.36
CNN1-204ENST00000586059 PABPN1Q86U42 306 aaKnown RBP eCLIP23.51■■□□□ 1.35
CNN1-204ENST00000586059 SHROOM4Q9ULL8 1493 aa23.3■■□□□ 1.32
CNN1-204ENST00000586059 DNAJC5BQ9UF47 199 aa22.93■■□□□ 1.26
CNN1-204ENST00000586059 EIF4G1Q04637 1599 aaKnown RBP22.93■■□□□ 1.26
CNN1-204ENST00000586059 CC2D2AQ9P2K1 1620 aa22.82■■□□□ 1.24
CNN1-204ENST00000586059 CECR2Q9BXF3 1484 aa22.67■■□□□ 1.22
CNN1-204ENST00000586059 SMARCA4P51532 1647 aa22.63■■□□□ 1.21
CNN1-204ENST00000586059 BAZ1AQ9NRL2 1556 aaPredicted RBP22.59■■□□□ 1.21
CNN1-204ENST00000586059 MROH2BQ7Z745 1585 aa22.46■■□□□ 1.19
CNN1-204ENST00000586059 SMARCA2P51531 1590 aa22.42■■□□□ 1.18
CNN1-204ENST00000586059 ATAD2BQ9ULI0 1458 aa22.41■■□□□ 1.18
CNN1-204ENST00000586059 PEG3Q9GZU2 1588 aa22.36■■□□□ 1.17
CNN1-204ENST00000586059 NCAPD3P42695 1498 aa22.35■■□□□ 1.17
CNN1-204ENST00000586059 HMGXB3Q12766 1538 aa22.32■■□□□ 1.16
CNN1-204ENST00000586059 WIZO95785 1651 aa22.27■■□□□ 1.16
CNN1-204ENST00000586059 BAZ1BQ9UIG0 1483 aaKnown RBP22.27■■□□□ 1.16
CNN1-204ENST00000586059 RSF1Q96T23 1441 aaPredicted RBP22.21■■□□□ 1.15
CNN1-204ENST00000586059 TOP2AP11388 1531 aaKnown RBP22.02■■□□□ 1.12
CNN1-204ENST00000586059 NESP48681 1621 aa21.84■■□□□ 1.09
CNN1-204ENST00000586059 LAMC3Q9Y6N6 1575 aa21.82■■□□□ 1.08
CNN1-204ENST00000586059 SUPT5HO00267 1087 aaKnown RBP21.74■■□□□ 1.07
CNN1-204ENST00000586059 ERCC6Q03468 1493 aa21.72■■□□□ 1.07
CNN1-204ENST00000586059 CCDC88BA6NC98 1476 aa21.71■■□□□ 1.07
CNN1-204ENST00000586059 CADPSQ9ULU8 1353 aa21.71■■□□□ 1.07
CNN1-204ENST00000586059 KIF21AQ7Z4S6 1674 aa21.67■■□□□ 1.06
CNN1-204ENST00000586059 PRDM2Q13029 1718 aa21.63■■□□□ 1.05
CNN1-204ENST00000586059 CFTRP13569 1480 aa21.62■■□□□ 1.05
CNN1-204ENST00000586059 PDS5BQ9NTI5 1447 aa21.62■■□□□ 1.05
CNN1-204ENST00000586059 THOC2Q8NI27 1593 aaKnown RBP21.53■■□□□ 1.04
CNN1-204ENST00000586059 FANCD2Q9BXW9 1451 aa21.51■■□□□ 1.03
CNN1-204ENST00000586059 CEP164Q9UPV0 1460 aa21.49■■□□□ 1.03
CNN1-204ENST00000586059 CUX2O14529 1486 aa21.43■■□□□ 1.02
CNN1-204ENST00000586059 MRC2Q9UBG0 1479 aa21.42■■□□□ 1.02
CNN1-204ENST00000586059 WDR62O43379 1518 aa21.35■■□□□ 1.01
CNN1-204ENST00000586059 URB2Q14146 1524 aaKnown RBP21.29■■□□□ 1
CNN1-204ENST00000586059 DNMBPQ6XZF7 1577 aa21.19■□□□□ 0.98
CNN1-204ENST00000586059 TOPBP1Q92547 1522 aa21.19■□□□□ 0.98
CNN1-204ENST00000586059 ABCC8Q09428 1581 aa21.16■□□□□ 0.98
CNN1-204ENST00000586059 CUX1P39880 1505 aa21.08■□□□□ 0.96
CNN1-204ENST00000586059 POLA1P09884 1462 aaPredicted RBP21.01■□□□□ 0.95
CNN1-204ENST00000586059 IFT140Q96RY7 1462 aa21.01■□□□□ 0.95
CNN1-204ENST00000586059 FGD5Q6ZNL6 1462 aa20.99■□□□□ 0.95
CNN1-204ENST00000586059 TARBP1Q13395 1621 aaKnown RBP20.96■□□□□ 0.95
CNN1-204ENST00000586059 BIVM-ERCC5R4GMW8 1640 aa20.96■□□□□ 0.95
CNN1-204ENST00000586059 WRNQ14191 1432 aaPredicted RBP eCLIP20.95■□□□□ 0.95
CNN1-204ENST00000586059 SYNJ1O43426 1573 aa20.95■□□□□ 0.94
CNN1-204ENST00000586059 TOP2BQ02880 1626 aa20.94■□□□□ 0.94
CNN1-204ENST00000586059 ZNF608Q9ULD9 1512 aaPredicted RBP20.91■□□□□ 0.94
CNN1-204ENST00000586059 RAD54L2Q9Y4B4 1467 aa20.91■□□□□ 0.94
CNN1-204ENST00000586059 EIF4G3O43432 1585 aaKnown RBP20.89■□□□□ 0.94
CNN1-204ENST00000586059 SOGA1O94964 1423 aa20.89■□□□□ 0.94
CNN1-204ENST00000586059 WDR97A6NE52 1622 aa20.88■□□□□ 0.93
CNN1-204ENST00000586059 AQRO60306 1485 aaKnown RBP eCLIP20.79■□□□□ 0.92
CNN1-204ENST00000586059 ABCA10Q8WWZ4 1543 aa20.77■□□□□ 0.92
CNN1-204ENST00000586059 TDRD9Q8NDG6 1382 aaKnown RBP20.76■□□□□ 0.91
CNN1-204ENST00000586059 PBRM1Q86U86 1689 aa20.73■□□□□ 0.91
CNN1-204ENST00000586059 ABCA5Q8WWZ7 1642 aa20.73■□□□□ 0.91
CNN1-204ENST00000586059 GAPVD1Q14C86 1478 aa20.68■□□□□ 0.9
CNN1-204ENST00000586059 GRIN2BQ13224 1484 aa20.66■□□□□ 0.9
CNN1-204ENST00000586059 CHD1O14646 1710 aa20.65■□□□□ 0.9
CNN1-204ENST00000586059 SNAPC4Q5SXM2 1469 aa20.64■□□□□ 0.89
CNN1-204ENST00000586059 MAGI1Q96QZ7 1491 aaPredicted RBP20.6■□□□□ 0.89
CNN1-204ENST00000586059 DNAJC5Q9H3Z4 198 aa20.55■□□□□ 0.88
CNN1-204ENST00000586059 ERICH3Q5RHP9 1530 aa20.53■□□□□ 0.88
CNN1-204ENST00000586059 ADAMTS12P58397 1594 aa20.53■□□□□ 0.88
CNN1-204ENST00000586059 SYNJ2O15056 1496 aa20.51■□□□□ 0.87
CNN1-204ENST00000586059 FBLN2P98095 1184 aa20.51■□□□□ 0.87
CNN1-204ENST00000586059 TRIM41Q8WV44 630 aa20.51■□□□□ 0.87
CNN1-204ENST00000586059 KIF27Q86VH2 1401 aa20.51■□□□□ 0.87
CNN1-204ENST00000586059 OSCARQ8IYS5 282 aa20.49■□□□□ 0.87
CNN1-204ENST00000586059 CHMP7Q8WUX9 453 aaPredicted RBP20.45■□□□□ 0.86
CNN1-204ENST00000586059 FHAD1B1AJZ9 1412 aa20.43■□□□□ 0.86
CNN1-204ENST00000586059 CUL7Q14999 1698 aa20.42■□□□□ 0.86
CNN1-204ENST00000586059 GRIN2AQ12879 1464 aa20.41■□□□□ 0.86
CNN1-204ENST00000586059 IGF1RP08069 1367 aa20.36■□□□□ 0.85
CNN1-204ENST00000586059 RUSC2Q8N2Y8 1516 aa20.36■□□□□ 0.85
CNN1-204ENST00000586059 CLASP1Q7Z460 1538 aa20.35■□□□□ 0.85
CNN1-204ENST00000586059 CHIC1Q5VXU3 224 aa20.33■□□□□ 0.85
CNN1-204ENST00000586059 CEP170Q5SW79 1584 aa20.33■□□□□ 0.84
CNN1-204ENST00000586059 NUP160Q12769 1436 aa20.28■□□□□ 0.84
CNN1-204ENST00000586059 CARMIL1Q5VZK9 1371 aa20.28■□□□□ 0.84
CNN1-204ENST00000586059 RIMBP3CA6NJZ7 1639 aa20.27■□□□□ 0.83
CNN1-204ENST00000586059 RIMBP3BA6NNM3 1639 aa20.27■□□□□ 0.83
CNN1-204ENST00000586059 RIMBP3Q9UFD9 1639 aa20.27■□□□□ 0.83
CNN1-204ENST00000586059 ARHGEF11O15085 1522 aa20.24■□□□□ 0.83
CNN1-204ENST00000586059 RAPGEF2Q9Y4G8 1499 aa20.19■□□□□ 0.82
CNN1-204ENST00000586059 EEA1Q15075 1411 aa20.19■□□□□ 0.82
CNN1-204ENST00000586059 SHROOM2Q13796 1616 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms