RNA–Protein interactions for RNA: ENST00000586039.1

PKN1-205, Transcript of protein kinase N1, humanhuman

TSL 2

Gene PKN1, Length 686 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-205ENST00000586039 NISCHQ9Y2I1 1504 aa39.99■■■■□ 3.99
PKN1-205ENST00000586039 ABCC9O60706 1549 aa37.15■■■■□ 3.54
PKN1-205ENST00000586039 CCDC180Q9P1Z9 1646 aa36.27■■■■□ 3.4
PKN1-205ENST00000586039 DNAJC5BQ9UF47 199 aa35.61■■■■□ 3.29
PKN1-205ENST00000586039 RB1CC1Q8TDY2 1594 aa34.98■■■■□ 3.19
PKN1-205ENST00000586039 NACADO15069 1562 aa34.53■■■■□ 3.12
PKN1-205ENST00000586039 PABPN1Q86U42 306 aaKnown RBP eCLIP34.46■■■■□ 3.11
PKN1-205ENST00000586039 DCAF8L2P0C7V8 631 aa34.22■■■■□ 3.07
PKN1-205ENST00000586039 UNC13AQ9UPW8 1703 aa34.15■■■■□ 3.06
PKN1-205ENST00000586039 BICRAQ9NZM4 1560 aa33.94■■■■□ 3.02
PKN1-205ENST00000586039 MYO15BQ96JP2 1530 aa33.74■■■□□ 2.99
PKN1-205ENST00000586039 CECR2Q9BXF3 1484 aa33.57■■■□□ 2.97
PKN1-205ENST00000586039 CC2D2AQ9P2K1 1620 aa33.5■■■□□ 2.95
PKN1-205ENST00000586039 SHROOM4Q9ULL8 1493 aa33.45■■■□□ 2.95
PKN1-205ENST00000586039 DNAJC5Q9H3Z4 198 aa33.4■■■□□ 2.94
PKN1-205ENST00000586039 EIF4G1Q04637 1599 aaKnown RBP33.22■■■□□ 2.91
PKN1-205ENST00000586039 SCRIBQ14160 1630 aa32.99■■■□□ 2.87
PKN1-205ENST00000586039 DCAF1Q9Y4B6 1507 aa32.97■■■□□ 2.87
PKN1-205ENST00000586039 ZCCHC6Q5VYS8 1495 aaKnown RBP32.93■■■□□ 2.86
PKN1-205ENST00000586039 CUX2O14529 1486 aa32.4■■■□□ 2.78
PKN1-205ENST00000586039 ERCC6Q03468 1493 aa32.18■■■□□ 2.74
PKN1-205ENST00000586039 NCAPD3P42695 1498 aa31.88■■■□□ 2.69
PKN1-205ENST00000586039 ATAD2BQ9ULI0 1458 aa31.64■■■□□ 2.66
PKN1-205ENST00000586039 NESP48681 1621 aa31.63■■■□□ 2.65
PKN1-205ENST00000586039 TRIM41Q8WV44 630 aa31.59■■■□□ 2.65
PKN1-205ENST00000586039 HMGXB3Q12766 1538 aa31.54■■■□□ 2.64
PKN1-205ENST00000586039 SMARCA2P51531 1590 aa31.53■■■□□ 2.64
PKN1-205ENST00000586039 THOC2Q8NI27 1593 aaKnown RBP31.48■■■□□ 2.63
PKN1-205ENST00000586039 SMARCA4P51532 1647 aa31.38■■■□□ 2.61
PKN1-205ENST00000586039 BAZ1BQ9UIG0 1483 aaKnown RBP31.32■■■□□ 2.6
PKN1-205ENST00000586039 LAMC3Q9Y6N6 1575 aa31.31■■■□□ 2.6
PKN1-205ENST00000586039 KIF21AQ7Z4S6 1674 aa31.21■■■□□ 2.59
PKN1-205ENST00000586039 PDS5BQ9NTI5 1447 aa31.19■■■□□ 2.58
PKN1-205ENST00000586039 BAZ1AQ9NRL2 1556 aaPredicted RBP31.12■■■□□ 2.57
PKN1-205ENST00000586039 PEG3Q9GZU2 1588 aa31.08■■■□□ 2.57
PKN1-205ENST00000586039 MRC2Q9UBG0 1479 aa30.94■■■□□ 2.54
PKN1-205ENST00000586039 WDR62O43379 1518 aa30.88■■■□□ 2.53
PKN1-205ENST00000586039 CADPSQ9ULU8 1353 aa30.88■■■□□ 2.53
PKN1-205ENST00000586039 OSCARQ8IYS5 282 aa30.81■■■□□ 2.52
PKN1-205ENST00000586039 MROH2BQ7Z745 1585 aa30.78■■■□□ 2.52
PKN1-205ENST00000586039 CEP164Q9UPV0 1460 aa30.64■■■□□ 2.5
PKN1-205ENST00000586039 FANCD2Q9BXW9 1451 aa30.52■■■□□ 2.48
PKN1-205ENST00000586039 RIMBP3CA6NJZ7 1639 aa30.45■■■□□ 2.47
PKN1-205ENST00000586039 RIMBP3BA6NNM3 1639 aa30.45■■■□□ 2.47
PKN1-205ENST00000586039 RIMBP3Q9UFD9 1639 aa30.45■■■□□ 2.47
PKN1-205ENST00000586039 WIZO95785 1651 aa30.38■■■□□ 2.45
PKN1-205ENST00000586039 CFTRP13569 1480 aa30.32■■■□□ 2.44
PKN1-205ENST00000586039 URB2Q14146 1524 aaKnown RBP30.3■■■□□ 2.44
PKN1-205ENST00000586039 ARHGEF11O15085 1522 aa30.26■■■□□ 2.43
PKN1-205ENST00000586039 CYB5RLQ6IPT4 315 aa30.14■■■□□ 2.42
PKN1-205ENST00000586039 TRHP20396 242 aaPredicted RBP30.13■■■□□ 2.41
PKN1-205ENST00000586039 ZNF608Q9ULD9 1512 aaPredicted RBP30.07■■■□□ 2.4
PKN1-205ENST00000586039 IFT140Q96RY7 1462 aa30.07■■■□□ 2.4
PKN1-205ENST00000586039 PRDM2Q13029 1718 aa29.95■■■□□ 2.38
PKN1-205ENST00000586039 TOP2AP11388 1531 aaKnown RBP29.95■■■□□ 2.38
PKN1-205ENST00000586039 AEBP2Q6ZN18 517 aaPredicted RBP29.94■■■□□ 2.38
PKN1-205ENST00000586039 ARAP1Q96P48 1450 aa29.89■■■□□ 2.38
PKN1-205ENST00000586039 EIF4G3O43432 1585 aaKnown RBP29.87■■■□□ 2.37
PKN1-205ENST00000586039 RSF1Q96T23 1441 aaPredicted RBP29.84■■■□□ 2.37
PKN1-205ENST00000586039 TOPBP1Q92547 1522 aa29.83■■■□□ 2.37
PKN1-205ENST00000586039 CHD1O14646 1710 aa29.82■■■□□ 2.36
PKN1-205ENST00000586039 FBLN2P98095 1184 aa29.76■■■□□ 2.35
PKN1-205ENST00000586039 ABCC8Q09428 1581 aa29.76■■■□□ 2.35
PKN1-205ENST00000586039 AQRO60306 1485 aaKnown RBP eCLIP29.72■■■□□ 2.352e-12■■■■■ 52
PKN1-205ENST00000586039 DNMBPQ6XZF7 1577 aa29.65■■■□□ 2.34
PKN1-205ENST00000586039 TARBP1Q13395 1621 aaKnown RBP29.62■■■□□ 2.33
PKN1-205ENST00000586039 CCDC88BA6NC98 1476 aa29.61■■■□□ 2.33
PKN1-205ENST00000586039 POLA1P09884 1462 aaPredicted RBP29.47■■■□□ 2.31
PKN1-205ENST00000586039 CLASP1Q7Z460 1538 aa29.45■■■□□ 2.3
PKN1-205ENST00000586039 CHMP7Q8WUX9 453 aaPredicted RBP29.4■■■□□ 2.3
PKN1-205ENST00000586039 TDRD9Q8NDG6 1382 aaKnown RBP29.39■■■□□ 2.3
PKN1-205ENST00000586039 SYNJ1O43426 1573 aa29.39■■■□□ 2.3
PKN1-205ENST00000586039 SNAPC4Q5SXM2 1469 aa29.38■■■□□ 2.29
PKN1-205ENST00000586039 RAD54L2Q9Y4B4 1467 aa29.37■■■□□ 2.29
PKN1-205ENST00000586039 SOGA1O94964 1423 aa29.35■■■□□ 2.29
PKN1-205ENST00000586039 WDR97A6NE52 1622 aa29.3■■■□□ 2.28
PKN1-205ENST00000586039 MAGI1Q96QZ7 1491 aaPredicted RBP29.29■■■□□ 2.28
PKN1-205ENST00000586039 GAPVD1Q14C86 1478 aa29.23■■■□□ 2.27
PKN1-205ENST00000586039 SYNJ2O15056 1496 aa29.2■■■□□ 2.26
PKN1-205ENST00000586039 GRIN2BQ13224 1484 aa29.19■■■□□ 2.26
PKN1-205ENST00000586039 FGD5Q6ZNL6 1462 aa29.17■■■□□ 2.26
PKN1-205ENST00000586039 PBRM1Q86U86 1689 aa28.99■■■□□ 2.23
PKN1-205ENST00000586039 CUX1P39880 1505 aa28.97■■■□□ 2.23
PKN1-205ENST00000586039 ERCC6L2Q5T890 1561 aa28.91■■■□□ 2.22
PKN1-205ENST00000586039 KIF13AQ9H1H9 1805 aa28.82■■■□□ 2.2
PKN1-205ENST00000586039 CEP170Q5SW79 1584 aa28.81■■■□□ 2.2
PKN1-205ENST00000586039 ABCA5Q8WWZ7 1642 aa28.8■■■□□ 2.2
PKN1-205ENST00000586039 GRIN2AQ12879 1464 aa28.8■■■□□ 2.2
PKN1-205ENST00000586039 ABCA10Q8WWZ4 1543 aa28.79■■■□□ 2.2
PKN1-205ENST00000586039 NUP160Q12769 1436 aa28.73■■■□□ 2.19
PKN1-205ENST00000586039 SHROOM2Q13796 1616 aa28.69■■■□□ 2.18
PKN1-205ENST00000586039 ILDR1Q86SU0 546 aaPredicted RBP28.66■■■□□ 2.18
PKN1-205ENST00000586039 ADAMTS12P58397 1594 aa28.66■■■□□ 2.18
PKN1-205ENST00000586039 FAM69CQ0P6D2 419 aa28.63■■■□□ 2.17
PKN1-205ENST00000586039 KDM4FA0A1W2PPD8 638 aa28.58■■■□□ 2.17
PKN1-205ENST00000586039 ABCC10Q5T3U5 1492 aa28.58■■■□□ 2.17
PKN1-205ENST00000586039 FHAD1B1AJZ9 1412 aa28.57■■■□□ 2.16
PKN1-205ENST00000586039 PRG4Q92954 1404 aaPredicted RBP28.55■■■□□ 2.16
PKN1-205ENST00000586039 NPM1P06748 294 aaKnown RBP eCLIP28.55■■■□□ 2.16
PKN1-205ENST00000586039 WRNQ14191 1432 aaPredicted RBP eCLIP28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms