RNA–Protein interactions for RNA: ENST00000585871.1

ROGDI-203, Transcript of rogdi homolog, humanhuman

TSL 2

Gene ROGDI, Length 983 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROGDI-203ENST00000585871 NISCHQ9Y2I1 1504 aa51.95■■■■■ 5.91
ROGDI-203ENST00000585871 ABCC9O60706 1549 aa46.61■■■■■ 5.05
ROGDI-203ENST00000585871 CCDC180Q9P1Z9 1646 aa45.94■■■■■ 4.94
ROGDI-203ENST00000585871 DNAJC5BQ9UF47 199 aa44.4■■■■■ 4.7
ROGDI-203ENST00000585871 RB1CC1Q8TDY2 1594 aa44.04■■■■■ 4.64
ROGDI-203ENST00000585871 NACADO15069 1562 aa43.56■■■■■ 4.56
ROGDI-203ENST00000585871 ZCCHC6Q5VYS8 1495 aaKnown RBP43.45■■■■■ 4.55
ROGDI-203ENST00000585871 PABPN1Q86U42 306 aaKnown RBP eCLIP43.26■■■■■ 4.52
ROGDI-203ENST00000585871 DCAF8L2P0C7V8 631 aa43.09■■■■■ 4.49
ROGDI-203ENST00000585871 DCAF1Q9Y4B6 1507 aa43.07■■■■■ 4.48
ROGDI-203ENST00000585871 UNC13AQ9UPW8 1703 aa43.04■■■■■ 4.48
ROGDI-203ENST00000585871 MYO15BQ96JP2 1530 aa43.01■■■■■ 4.48
ROGDI-203ENST00000585871 BICRAQ9NZM4 1560 aa42.83■■■■■ 4.45
ROGDI-203ENST00000585871 SHROOM4Q9ULL8 1493 aa42.17■■■■■ 4.34
ROGDI-203ENST00000585871 CC2D2AQ9P2K1 1620 aa42.08■■■■■ 4.33
ROGDI-203ENST00000585871 CECR2Q9BXF3 1484 aa42.07■■■■■ 4.33
ROGDI-203ENST00000585871 SCRIBQ14160 1630 aa41.91■■■■■ 4.3
ROGDI-203ENST00000585871 EIF4G1Q04637 1599 aaKnown RBP41.82■■■■■ 4.29
ROGDI-203ENST00000585871 DNAJC5Q9H3Z4 198 aa41.29■■■■■ 4.2
ROGDI-203ENST00000585871 CUX2O14529 1486 aa40.5■■■■■ 4.07
ROGDI-203ENST00000585871 ERCC6Q03468 1493 aa40.28■■■■■ 4.04
ROGDI-203ENST00000585871 NCAPD3P42695 1498 aa40.24■■■■■ 4.03
ROGDI-203ENST00000585871 BAZ1AQ9NRL2 1556 aaPredicted RBP40.23■■■■■ 4.03
ROGDI-203ENST00000585871 SMARCA4P51532 1647 aa40.18■■■■■ 4.02
ROGDI-203ENST00000585871 MROH2BQ7Z745 1585 aa40.05■■■■■ 4
ROGDI-203ENST00000585871 ATAD2BQ9ULI0 1458 aa40.02■■■■■ 4
ROGDI-203ENST00000585871 HMGXB3Q12766 1538 aa39.89■■■■□ 3.98
ROGDI-203ENST00000585871 NESP48681 1621 aa39.85■■■■□ 3.97
ROGDI-203ENST00000585871 SMARCA2P51531 1590 aa39.84■■■■□ 3.97
ROGDI-203ENST00000585871 RSF1Q96T23 1441 aaPredicted RBP39.82■■■■□ 3.97
ROGDI-203ENST00000585871 PEG3Q9GZU2 1588 aa39.8■■■■□ 3.96
ROGDI-203ENST00000585871 WIZO95785 1651 aa39.63■■■■□ 3.93
ROGDI-203ENST00000585871 THOC2Q8NI27 1593 aaKnown RBP39.62■■■■□ 3.93
ROGDI-203ENST00000585871 BAZ1BQ9UIG0 1483 aaKnown RBP39.57■■■■□ 3.93
ROGDI-203ENST00000585871 LAMC3Q9Y6N6 1575 aa39.44■■■■□ 3.9
ROGDI-203ENST00000585871 TOP2AP11388 1531 aaKnown RBP39.3■■■■□ 3.88
ROGDI-203ENST00000585871 KIF21AQ7Z4S6 1674 aa39.29■■■■□ 3.88
ROGDI-203ENST00000585871 PDS5BQ9NTI5 1447 aa39.23■■■■□ 3.87
ROGDI-203ENST00000585871 SUPT5HO00267 1087 aaKnown RBP39.21■■■■□ 3.87
ROGDI-203ENST00000585871 TRIM41Q8WV44 630 aa39.14■■■■□ 3.86
ROGDI-203ENST00000585871 CADPSQ9ULU8 1353 aa38.96■■■■□ 3.83
ROGDI-203ENST00000585871 MRC2Q9UBG0 1479 aa38.95■■■■□ 3.83
ROGDI-203ENST00000585871 WDR62O43379 1518 aa38.9■■■■□ 3.82
ROGDI-203ENST00000585871 CCDC88BA6NC98 1476 aa38.79■■■■□ 3.8
ROGDI-203ENST00000585871 CEP164Q9UPV0 1460 aa38.64■■■■□ 3.78
ROGDI-203ENST00000585871 FANCD2Q9BXW9 1451 aa38.54■■■■□ 3.76
ROGDI-203ENST00000585871 OSCARQ8IYS5 282 aa38.46■■■■□ 3.75
ROGDI-203ENST00000585871 CFTRP13569 1480 aa38.45■■■■□ 3.75
ROGDI-203ENST00000585871 URB2Q14146 1524 aaKnown RBP38.29■■■■□ 3.72
ROGDI-203ENST00000585871 PRDM2Q13029 1718 aa38.24■■■■□ 3.71
ROGDI-203ENST00000585871 RIMBP3CA6NJZ7 1639 aa38.1■■■■□ 3.69
ROGDI-203ENST00000585871 RIMBP3BA6NNM3 1639 aa38.1■■■■□ 3.69
ROGDI-203ENST00000585871 RIMBP3Q9UFD9 1639 aa38.1■■■■□ 3.69
ROGDI-203ENST00000585871 ZNF608Q9ULD9 1512 aaPredicted RBP37.93■■■■□ 3.66
ROGDI-203ENST00000585871 ARHGEF11O15085 1522 aa37.92■■■■□ 3.66
ROGDI-203ENST00000585871 IFT140Q96RY7 1462 aa37.9■■■■□ 3.66
ROGDI-203ENST00000585871 TOPBP1Q92547 1522 aa37.73■■■■□ 3.63
ROGDI-203ENST00000585871 EIF4G3O43432 1585 aaKnown RBP37.68■■■■□ 3.62
ROGDI-203ENST00000585871 CYB5RLQ6IPT4 315 aa37.61■■■■□ 3.61
ROGDI-203ENST00000585871 DNMBPQ6XZF7 1577 aa37.59■■■■□ 3.61
ROGDI-203ENST00000585871 ABCC8Q09428 1581 aa37.59■■■■□ 3.61
ROGDI-203ENST00000585871 CUX1P39880 1505 aa37.53■■■■□ 3.6
ROGDI-203ENST00000585871 WRNQ14191 1432 aaPredicted RBP eCLIP37.53■■■■□ 3.6
ROGDI-203ENST00000585871 CHD1O14646 1710 aa37.52■■■■□ 3.6
ROGDI-203ENST00000585871 ARAP1Q96P48 1450 aa37.51■■■■□ 3.59
ROGDI-203ENST00000585871 AQRO60306 1485 aaKnown RBP eCLIP37.47■■■■□ 3.592e-6■■■■■ 30.4
ROGDI-203ENST00000585871 TARBP1Q13395 1621 aaKnown RBP37.47■■■■□ 3.59
ROGDI-203ENST00000585871 SYNJ1O43426 1573 aa37.42■■■■□ 3.58
ROGDI-203ENST00000585871 TRHP20396 242 aaPredicted RBP37.42■■■■□ 3.58
ROGDI-203ENST00000585871 BIVM-ERCC5R4GMW8 1640 aa37.41■■■■□ 3.58
ROGDI-203ENST00000585871 TOP2BQ02880 1626 aa37.4■■■■□ 3.58
ROGDI-203ENST00000585871 FBLN2P98095 1184 aa37.31■■■■□ 3.56
ROGDI-203ENST00000585871 POLA1P09884 1462 aaPredicted RBP37.31■■■■□ 3.56
ROGDI-203ENST00000585871 FGD5Q6ZNL6 1462 aa37.29■■■■□ 3.56
ROGDI-203ENST00000585871 RAD54L2Q9Y4B4 1467 aa37.17■■■■□ 3.54
ROGDI-203ENST00000585871 CLASP1Q7Z460 1538 aa37.11■■■■□ 3.53
ROGDI-203ENST00000585871 TDRD9Q8NDG6 1382 aaKnown RBP37.11■■■■□ 3.53
ROGDI-203ENST00000585871 SOGA1O94964 1423 aa37.1■■■■□ 3.53
ROGDI-203ENST00000585871 SNAPC4Q5SXM2 1469 aa37.09■■■■□ 3.53
ROGDI-203ENST00000585871 CHIC1Q5VXU3 224 aa37.04■■■■□ 3.52
ROGDI-203ENST00000585871 WDR97A6NE52 1622 aa37.02■■■■□ 3.52
ROGDI-203ENST00000585871 ABCA10Q8WWZ4 1543 aa36.98■■■■□ 3.51
ROGDI-203ENST00000585871 MAGI1Q96QZ7 1491 aaPredicted RBP36.94■■■■□ 3.5
ROGDI-203ENST00000585871 CHMP7Q8WUX9 453 aaPredicted RBP36.93■■■■□ 3.5
ROGDI-203ENST00000585871 GRIN2BQ13224 1484 aa36.87■■■■□ 3.49
ROGDI-203ENST00000585871 AEBP2Q6ZN18 517 aaPredicted RBP36.85■■■■□ 3.49
ROGDI-203ENST00000585871 SYNJ2O15056 1496 aa36.83■■■■□ 3.49
ROGDI-203ENST00000585871 ABCA5Q8WWZ7 1642 aa36.8■■■■□ 3.48
ROGDI-203ENST00000585871 GAPVD1Q14C86 1478 aa36.73■■■■□ 3.47
ROGDI-203ENST00000585871 KIF27Q86VH2 1401 aa36.68■■■■□ 3.46
ROGDI-203ENST00000585871 PBRM1Q86U86 1689 aa36.67■■■■□ 3.46
ROGDI-203ENST00000585871 ERICH3Q5RHP9 1530 aa36.55■■■■□ 3.44
ROGDI-203ENST00000585871 RUSC2Q8N2Y8 1516 aa36.54■■■■□ 3.44
ROGDI-203ENST00000585871 ERCC6L2Q5T890 1561 aa36.48■■■■□ 3.43
ROGDI-203ENST00000585871 EEA1Q15075 1411 aa36.47■■■■□ 3.43
ROGDI-203ENST00000585871 IGF1RP08069 1367 aa36.43■■■■□ 3.42
ROGDI-203ENST00000585871 ADAMTS12P58397 1594 aa36.4■■■■□ 3.42
ROGDI-203ENST00000585871 GRIN2AQ12879 1464 aa36.4■■■■□ 3.42
ROGDI-203ENST00000585871 CUL7Q14999 1698 aa36.36■■■■□ 3.41
ROGDI-203ENST00000585871 CEP170Q5SW79 1584 aa36.35■■■■□ 3.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms