RNA–Protein interactions for RNA: ENST00000585869.1

CNN1-203, Transcript of calponin 1, humanhuman

TSL 4

Gene CNN1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-203ENST00000585869 NISCHQ9Y2I1 1504 aa31.48■■■□□ 2.63
CNN1-203ENST00000585869 CCDC180Q9P1Z9 1646 aa28.42■■■□□ 2.14
CNN1-203ENST00000585869 ABCC9O60706 1549 aa28.18■■■□□ 2.1
CNN1-203ENST00000585869 RB1CC1Q8TDY2 1594 aa26.92■■□□□ 1.9
CNN1-203ENST00000585869 NACADO15069 1562 aa26.74■■□□□ 1.87
CNN1-203ENST00000585869 UNC13AQ9UPW8 1703 aa26.55■■□□□ 1.84
CNN1-203ENST00000585869 MYO15BQ96JP2 1530 aa26.4■■□□□ 1.82
CNN1-203ENST00000585869 DNAJC5BQ9UF47 199 aa26.36■■□□□ 1.81
CNN1-203ENST00000585869 DCAF8L2P0C7V8 631 aa26.25■■□□□ 1.79
CNN1-203ENST00000585869 BICRAQ9NZM4 1560 aa26.19■■□□□ 1.78
CNN1-203ENST00000585869 ZCCHC6Q5VYS8 1495 aaKnown RBP26.12■■□□□ 1.77
CNN1-203ENST00000585869 PABPN1Q86U42 306 aaKnown RBP eCLIP26.1■■□□□ 1.77
CNN1-203ENST00000585869 DCAF1Q9Y4B6 1507 aa26.07■■□□□ 1.76
CNN1-203ENST00000585869 SHROOM4Q9ULL8 1493 aa25.83■■□□□ 1.73
CNN1-203ENST00000585869 SCRIBQ14160 1630 aa25.76■■□□□ 1.71
CNN1-203ENST00000585869 CC2D2AQ9P2K1 1620 aa25.56■■□□□ 1.68
CNN1-203ENST00000585869 EIF4G1Q04637 1599 aaKnown RBP25.51■■□□□ 1.67
CNN1-203ENST00000585869 CECR2Q9BXF3 1484 aa25.39■■□□□ 1.65
CNN1-203ENST00000585869 SMARCA4P51532 1647 aa24.63■■□□□ 1.53
CNN1-203ENST00000585869 NCAPD3P42695 1498 aa24.62■■□□□ 1.53
CNN1-203ENST00000585869 ATAD2BQ9ULI0 1458 aa24.55■■□□□ 1.52
CNN1-203ENST00000585869 HMGXB3Q12766 1538 aa24.54■■□□□ 1.52
CNN1-203ENST00000585869 SMARCA2P51531 1590 aa24.53■■□□□ 1.52
CNN1-203ENST00000585869 BAZ1AQ9NRL2 1556 aaPredicted RBP24.45■■□□□ 1.5
CNN1-203ENST00000585869 PEG3Q9GZU2 1588 aa24.42■■□□□ 1.5
CNN1-203ENST00000585869 CUX2O14529 1486 aa24.35■■□□□ 1.49
CNN1-203ENST00000585869 ERCC6Q03468 1493 aa24.31■■□□□ 1.48
CNN1-203ENST00000585869 BAZ1BQ9UIG0 1483 aaKnown RBP24.3■■□□□ 1.48
CNN1-203ENST00000585869 MROH2BQ7Z745 1585 aa24.24■■□□□ 1.47
CNN1-203ENST00000585869 NESP48681 1621 aa24.24■■□□□ 1.47
CNN1-203ENST00000585869 DNAJC5Q9H3Z4 198 aa24.19■■□□□ 1.46
CNN1-203ENST00000585869 LAMC3Q9Y6N6 1575 aa24.16■■□□□ 1.46
CNN1-203ENST00000585869 THOC2Q8NI27 1593 aaKnown RBP24.14■■□□□ 1.45
CNN1-203ENST00000585869 KIF21AQ7Z4S6 1674 aa24.11■■□□□ 1.45
CNN1-203ENST00000585869 WIZO95785 1651 aa24.02■■□□□ 1.44
CNN1-203ENST00000585869 PDS5BQ9NTI5 1447 aa23.87■■□□□ 1.41
CNN1-203ENST00000585869 CADPSQ9ULU8 1353 aa23.81■■□□□ 1.4
CNN1-203ENST00000585869 WDR62O43379 1518 aa23.74■■□□□ 1.39
CNN1-203ENST00000585869 MRC2Q9UBG0 1479 aa23.73■■□□□ 1.39
CNN1-203ENST00000585869 TOP2AP11388 1531 aaKnown RBP23.69■■□□□ 1.38
CNN1-203ENST00000585869 RSF1Q96T23 1441 aaPredicted RBP23.68■■□□□ 1.38
CNN1-203ENST00000585869 PRDM2Q13029 1718 aa23.67■■□□□ 1.38
CNN1-203ENST00000585869 CEP164Q9UPV0 1460 aa23.63■■□□□ 1.37
CNN1-203ENST00000585869 CFTRP13569 1480 aa23.61■■□□□ 1.37
CNN1-203ENST00000585869 FANCD2Q9BXW9 1451 aa23.59■■□□□ 1.37
CNN1-203ENST00000585869 URB2Q14146 1524 aaKnown RBP23.43■■□□□ 1.34
CNN1-203ENST00000585869 CCDC88BA6NC98 1476 aa23.34■■□□□ 1.33
CNN1-203ENST00000585869 TOPBP1Q92547 1522 aa23.18■■□□□ 1.3
CNN1-203ENST00000585869 IFT140Q96RY7 1462 aa23.15■■□□□ 1.3
CNN1-203ENST00000585869 DNMBPQ6XZF7 1577 aa23.14■■□□□ 1.3
CNN1-203ENST00000585869 ZNF608Q9ULD9 1512 aaPredicted RBP23.11■■□□□ 1.29
CNN1-203ENST00000585869 EIF4G3O43432 1585 aaKnown RBP23.1■■□□□ 1.29
CNN1-203ENST00000585869 ABCC8Q09428 1581 aa23.1■■□□□ 1.29
CNN1-203ENST00000585869 TARBP1Q13395 1621 aaKnown RBP23.06■■□□□ 1.28
CNN1-203ENST00000585869 OSCARQ8IYS5 282 aa23.05■■□□□ 1.28
CNN1-203ENST00000585869 TRIM41Q8WV44 630 aa23.05■■□□□ 1.28
CNN1-203ENST00000585869 CHD1O14646 1710 aa23■■□□□ 1.27
CNN1-203ENST00000585869 RIMBP3CA6NJZ7 1639 aa23■■□□□ 1.27
CNN1-203ENST00000585869 RIMBP3BA6NNM3 1639 aa23■■□□□ 1.27
CNN1-203ENST00000585869 RIMBP3Q9UFD9 1639 aa23■■□□□ 1.27
CNN1-203ENST00000585869 POLA1P09884 1462 aaPredicted RBP22.93■■□□□ 1.26
CNN1-203ENST00000585869 ARHGEF11O15085 1522 aa22.87■■□□□ 1.25
CNN1-203ENST00000585869 WDR97A6NE52 1622 aa22.86■■□□□ 1.25
CNN1-203ENST00000585869 AQRO60306 1485 aaKnown RBP eCLIP22.85■■□□□ 1.25
CNN1-203ENST00000585869 RAD54L2Q9Y4B4 1467 aa22.8■■□□□ 1.24
CNN1-203ENST00000585869 CUX1P39880 1505 aa22.79■■□□□ 1.24
CNN1-203ENST00000585869 FGD5Q6ZNL6 1462 aa22.78■■□□□ 1.24
CNN1-203ENST00000585869 SOGA1O94964 1423 aa22.74■■□□□ 1.23
CNN1-203ENST00000585869 PBRM1Q86U86 1689 aa22.72■■□□□ 1.23
CNN1-203ENST00000585869 SNAPC4Q5SXM2 1469 aa22.67■■□□□ 1.22
CNN1-203ENST00000585869 TDRD9Q8NDG6 1382 aaKnown RBP22.66■■□□□ 1.22
CNN1-203ENST00000585869 CLASP1Q7Z460 1538 aa22.66■■□□□ 1.22
CNN1-203ENST00000585869 MAGI1Q96QZ7 1491 aaPredicted RBP22.64■■□□□ 1.21
CNN1-203ENST00000585869 ARAP1Q96P48 1450 aa22.63■■□□□ 1.21
CNN1-203ENST00000585869 ABCA5Q8WWZ7 1642 aa22.61■■□□□ 1.21
CNN1-203ENST00000585869 SYNJ1O43426 1573 aa22.6■■□□□ 1.21
CNN1-203ENST00000585869 GRIN2BQ13224 1484 aa22.6■■□□□ 1.21
CNN1-203ENST00000585869 FBLN2P98095 1184 aa22.56■■□□□ 1.2
CNN1-203ENST00000585869 ABCA10Q8WWZ4 1543 aa22.55■■□□□ 1.2
CNN1-203ENST00000585869 SYNJ2O15056 1496 aa22.54■■□□□ 1.2
CNN1-203ENST00000585869 BIVM-ERCC5R4GMW8 1640 aa22.54■■□□□ 1.2
CNN1-203ENST00000585869 GAPVD1Q14C86 1478 aa22.51■■□□□ 1.19
CNN1-203ENST00000585869 CYB5RLQ6IPT4 315 aa22.5■■□□□ 1.19
CNN1-203ENST00000585869 TOP2BQ02880 1626 aa22.48■■□□□ 1.19
CNN1-203ENST00000585869 SUPT5HO00267 1087 aaKnown RBP22.44■■□□□ 1.18
CNN1-203ENST00000585869 CHMP7Q8WUX9 453 aaPredicted RBP22.43■■□□□ 1.18
CNN1-203ENST00000585869 ADAMTS12P58397 1594 aa22.42■■□□□ 1.18
CNN1-203ENST00000585869 WRNQ14191 1432 aaPredicted RBP eCLIP22.36■■□□□ 1.17
CNN1-203ENST00000585869 GRIN2AQ12879 1464 aa22.34■■□□□ 1.17
CNN1-203ENST00000585869 CEP170Q5SW79 1584 aa22.32■■□□□ 1.16
CNN1-203ENST00000585869 SHROOM2Q13796 1616 aa22.29■■□□□ 1.16
CNN1-203ENST00000585869 ERICH3Q5RHP9 1530 aa22.28■■□□□ 1.16
CNN1-203ENST00000585869 NUP160Q12769 1436 aa22.27■■□□□ 1.16
CNN1-203ENST00000585869 ERCC6L2Q5T890 1561 aa22.26■■□□□ 1.15
CNN1-203ENST00000585869 TRHP20396 242 aaPredicted RBP22.22■■□□□ 1.15
CNN1-203ENST00000585869 FHAD1B1AJZ9 1412 aa22.22■■□□□ 1.15
CNN1-203ENST00000585869 RUSC2Q8N2Y8 1516 aa22.11■■□□□ 1.13
CNN1-203ENST00000585869 KIF13AQ9H1H9 1805 aa22.06■■□□□ 1.12
CNN1-203ENST00000585869 CUL7Q14999 1698 aa22.03■■□□□ 1.12
CNN1-203ENST00000585869 PRG4Q92954 1404 aaPredicted RBP21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms