RNA–Protein interactions for RNA: ENST00000585805.5

PSME3-206, Transcript of proteasome activator subunit 3, humanhuman

TSL 1 (best)

Gene PSME3, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-206ENST00000585805 NISCHQ9Y2I1 1504 aa47.72■■■■■ 5.23
PSME3-206ENST00000585805 CCDC180Q9P1Z9 1646 aa42.7■■■■■ 4.43
PSME3-206ENST00000585805 ABCC9O60706 1549 aa42.41■■■■■ 4.38
PSME3-206ENST00000585805 RB1CC1Q8TDY2 1594 aa40.5■■■■■ 4.07
PSME3-206ENST00000585805 NACADO15069 1562 aa40.32■■■■■ 4.04
PSME3-206ENST00000585805 DCAF8L2P0C7V8 631 aa40■■■■□ 3.99
PSME3-206ENST00000585805 MYO15BQ96JP2 1530 aa39.92■■■■□ 3.98
PSME3-206ENST00000585805 ZCCHC6Q5VYS8 1495 aaKnown RBP39.63■■■■□ 3.93
PSME3-206ENST00000585805 DNAJC5BQ9UF47 199 aa39.58■■■■□ 3.93
PSME3-206ENST00000585805 UNC13AQ9UPW8 1703 aa39.55■■■■□ 3.92
PSME3-206ENST00000585805 PABPN1Q86U42 306 aaKnown RBP eCLIP39.49■■■■□ 3.91
PSME3-206ENST00000585805 DCAF1Q9Y4B6 1507 aa39.48■■■■□ 3.91
PSME3-206ENST00000585805 BICRAQ9NZM4 1560 aa39.36■■■■□ 3.89
PSME3-206ENST00000585805 SHROOM4Q9ULL8 1493 aa38.9■■■■□ 3.82
PSME3-206ENST00000585805 SCRIBQ14160 1630 aa38.87■■■■□ 3.81
PSME3-206ENST00000585805 EIF4G1Q04637 1599 aaKnown RBP38.34■■■■□ 3.73
PSME3-206ENST00000585805 CC2D2AQ9P2K1 1620 aa38.33■■■■□ 3.73
PSME3-206ENST00000585805 CECR2Q9BXF3 1484 aa38.19■■■■□ 3.7
PSME3-206ENST00000585805 NCAPD3P42695 1498 aa37.24■■■■□ 3.55
PSME3-206ENST00000585805 SMARCA4P51532 1647 aa37.16■■■■□ 3.54
PSME3-206ENST00000585805 ATAD2BQ9ULI0 1458 aa37.14■■■■□ 3.54
PSME3-206ENST00000585805 SMARCA2P51531 1590 aa37.04■■■■□ 3.52
PSME3-206ENST00000585805 BAZ1AQ9NRL2 1556 aaPredicted RBP37.01■■■■□ 3.52
PSME3-206ENST00000585805 HMGXB3Q12766 1538 aa36.99■■■■□ 3.51
PSME3-206ENST00000585805 PEG3Q9GZU2 1588 aa36.85■■■■□ 3.49
PSME3-206ENST00000585805 BAZ1BQ9UIG0 1483 aaKnown RBP36.77■■■■□ 3.48
PSME3-206ENST00000585805 MROH2BQ7Z745 1585 aa36.76■■■■□ 3.48
PSME3-206ENST00000585805 ERCC6Q03468 1493 aa36.57■■■■□ 3.45
PSME3-206ENST00000585805 NESP48681 1621 aa36.52■■■■□ 3.44
PSME3-206ENST00000585805 CUX2O14529 1486 aa36.49■■■■□ 3.43
PSME3-206ENST00000585805 LAMC3Q9Y6N6 1575 aa36.33■■■■□ 3.41
PSME3-206ENST00000585805 WIZO95785 1651 aa36.29■■■■□ 3.4
PSME3-206ENST00000585805 DNAJC5Q9H3Z4 198 aa36.15■■■■□ 3.38
PSME3-206ENST00000585805 THOC2Q8NI27 1593 aaKnown RBP36.13■■■■□ 3.37
PSME3-206ENST00000585805 RSF1Q96T23 1441 aaPredicted RBP36.12■■■■□ 3.37
PSME3-206ENST00000585805 PDS5BQ9NTI5 1447 aa36.09■■■■□ 3.37
PSME3-206ENST00000585805 CADPSQ9ULU8 1353 aa36.09■■■■□ 3.37
PSME3-206ENST00000585805 KIF21AQ7Z4S6 1674 aa36.03■■■■□ 3.36
PSME3-206ENST00000585805 TOP2AP11388 1531 aaKnown RBP35.9■■■■□ 3.34
PSME3-206ENST00000585805 MRC2Q9UBG0 1479 aa35.78■■■■□ 3.32
PSME3-206ENST00000585805 CFTRP13569 1480 aa35.76■■■■□ 3.31
PSME3-206ENST00000585805 WDR62O43379 1518 aa35.71■■■■□ 3.31
PSME3-206ENST00000585805 CEP164Q9UPV0 1460 aa35.68■■■■□ 3.3
PSME3-206ENST00000585805 FANCD2Q9BXW9 1451 aa35.67■■■■□ 3.3
PSME3-206ENST00000585805 CCDC88BA6NC98 1476 aa35.48■■■■□ 3.27
PSME3-206ENST00000585805 URB2Q14146 1524 aaKnown RBP35.38■■■■□ 3.25
PSME3-206ENST00000585805 PRDM2Q13029 1718 aa35.35■■■■□ 3.25
PSME3-206ENST00000585805 TOPBP1Q92547 1522 aa35.03■■■■□ 3.2
PSME3-206ENST00000585805 ABCC8Q09428 1581 aa34.97■■■■□ 3.19
PSME3-206ENST00000585805 IFT140Q96RY7 1462 aa34.97■■■■□ 3.19
PSME3-206ENST00000585805 DNMBPQ6XZF7 1577 aa34.93■■■■□ 3.18
PSME3-206ENST00000585805 ZNF608Q9ULD9 1512 aaPredicted RBP34.89■■■■□ 3.18
PSME3-206ENST00000585805 OSCARQ8IYS5 282 aa34.81■■■■□ 3.16
PSME3-206ENST00000585805 TARBP1Q13395 1621 aaKnown RBP34.71■■■■□ 3.15
PSME3-206ENST00000585805 EIF4G3O43432 1585 aaKnown RBP34.7■■■■□ 3.15
PSME3-206ENST00000585805 POLA1P09884 1462 aaPredicted RBP34.7■■■■□ 3.15
PSME3-206ENST00000585805 AQRO60306 1485 aaKnown RBP eCLIP34.58■■■■□ 3.134e-7■■■■□ 21.8
PSME3-206ENST00000585805 SUPT5HO00267 1087 aaKnown RBP34.58■■■■□ 3.13
PSME3-206ENST00000585805 TRIM41Q8WV44 630 aa34.58■■■■□ 3.13
PSME3-206ENST00000585805 RAD54L2Q9Y4B4 1467 aa34.53■■■■□ 3.12
PSME3-206ENST00000585805 CUX1P39880 1505 aa34.53■■■■□ 3.12
PSME3-206ENST00000585805 SOGA1O94964 1423 aa34.51■■■■□ 3.12
PSME3-206ENST00000585805 FGD5Q6ZNL6 1462 aa34.5■■■■□ 3.11
PSME3-206ENST00000585805 TDRD9Q8NDG6 1382 aaKnown RBP34.4■■■■□ 3.1
PSME3-206ENST00000585805 WDR97A6NE52 1622 aa34.39■■■■□ 3.1
PSME3-206ENST00000585805 CHD1O14646 1710 aa34.34■■■■□ 3.09
PSME3-206ENST00000585805 RIMBP3CA6NJZ7 1639 aa34.34■■■■□ 3.09
PSME3-206ENST00000585805 RIMBP3BA6NNM3 1639 aa34.34■■■■□ 3.09
PSME3-206ENST00000585805 RIMBP3Q9UFD9 1639 aa34.34■■■■□ 3.09
PSME3-206ENST00000585805 ARHGEF11O15085 1522 aa34.29■■■■□ 3.08
PSME3-206ENST00000585805 SNAPC4Q5SXM2 1469 aa34.25■■■■□ 3.07
PSME3-206ENST00000585805 FBLN2P98095 1184 aa34.22■■■■□ 3.07
PSME3-206ENST00000585805 GRIN2BQ13224 1484 aa34.2■■■■□ 3.07
PSME3-206ENST00000585805 MAGI1Q96QZ7 1491 aaPredicted RBP34.19■■■■□ 3.06
PSME3-206ENST00000585805 ABCA10Q8WWZ4 1543 aa34.16■■■■□ 3.06
PSME3-206ENST00000585805 GAPVD1Q14C86 1478 aa34.11■■■■□ 3.05
PSME3-206ENST00000585805 SYNJ2O15056 1496 aa34.07■■■■□ 3.05
PSME3-206ENST00000585805 ABCA5Q8WWZ7 1642 aa34.07■■■■□ 3.04
PSME3-206ENST00000585805 CHMP7Q8WUX9 453 aaPredicted RBP34.05■■■■□ 3.04
PSME3-206ENST00000585805 PBRM1Q86U86 1689 aa34.04■■■■□ 3.04
PSME3-206ENST00000585805 TOP2BQ02880 1626 aa34.04■■■■□ 3.04
PSME3-206ENST00000585805 CLASP1Q7Z460 1538 aa34.04■■■■□ 3.04
PSME3-206ENST00000585805 BIVM-ERCC5R4GMW8 1640 aa34.03■■■■□ 3.04
PSME3-206ENST00000585805 WRNQ14191 1432 aaPredicted RBP eCLIP34.03■■■■□ 3.04
PSME3-206ENST00000585805 SYNJ1O43426 1573 aa34■■■■□ 3.03
PSME3-206ENST00000585805 ARAP1Q96P48 1450 aa33.99■■■■□ 3.03
PSME3-206ENST00000585805 CYB5RLQ6IPT4 315 aa33.96■■■■□ 3.03
PSME3-206ENST00000585805 ADAMTS12P58397 1594 aa33.79■■■■□ 3
PSME3-206ENST00000585805 GRIN2AQ12879 1464 aa33.77■■■■□ 3
PSME3-206ENST00000585805 ERICH3Q5RHP9 1530 aa33.72■■■□□ 2.99
PSME3-206ENST00000585805 FHAD1B1AJZ9 1412 aa33.7■■■□□ 2.99
PSME3-206ENST00000585805 NUP160Q12769 1436 aa33.68■■■□□ 2.98
PSME3-206ENST00000585805 CEP170Q5SW79 1584 aa33.63■■■□□ 2.97
PSME3-206ENST00000585805 ERCC6L2Q5T890 1561 aa33.49■■■□□ 2.95
PSME3-206ENST00000585805 SHROOM2Q13796 1616 aa33.48■■■□□ 2.95
PSME3-206ENST00000585805 TRHP20396 242 aaPredicted RBP33.45■■■□□ 2.94
PSME3-206ENST00000585805 KIF27Q86VH2 1401 aa33.36■■■□□ 2.93
PSME3-206ENST00000585805 IGF1RP08069 1367 aa33.34■■■□□ 2.93
PSME3-206ENST00000585805 RUSC2Q8N2Y8 1516 aa33.31■■■□□ 2.92
PSME3-206ENST00000585805 PRG4Q92954 1404 aaPredicted RBP33.28■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms