RNA–Protein interactions for RNA: ENST00000585728.5

GFAP-206, Transcript of glial fibrillary acidic protein, humanhuman

TSL 3

Gene GFAP, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-206ENST00000585728 NISCHQ9Y2I1 1504 aa32.07■■■□□ 2.72
GFAP-206ENST00000585728 CCDC180Q9P1Z9 1646 aa28.83■■■□□ 2.21
GFAP-206ENST00000585728 ABCC9O60706 1549 aa28.68■■■□□ 2.18
GFAP-206ENST00000585728 RB1CC1Q8TDY2 1594 aa27.38■■□□□ 1.97
GFAP-206ENST00000585728 NACADO15069 1562 aa27.21■■□□□ 1.95
GFAP-206ENST00000585728 DCAF8L2P0C7V8 631 aa26.95■■□□□ 1.9
GFAP-206ENST00000585728 MYO15BQ96JP2 1530 aa26.85■■□□□ 1.89
GFAP-206ENST00000585728 UNC13AQ9UPW8 1703 aa26.85■■□□□ 1.89
GFAP-206ENST00000585728 DNAJC5BQ9UF47 199 aa26.84■■□□□ 1.89
GFAP-206ENST00000585728 PABPN1Q86U42 306 aaKnown RBP eCLIP26.66■■□□□ 1.86
GFAP-206ENST00000585728 ZCCHC6Q5VYS8 1495 aaKnown RBP26.59■■□□□ 1.85
GFAP-206ENST00000585728 BICRAQ9NZM4 1560 aa26.58■■□□□ 1.85
GFAP-206ENST00000585728 DCAF1Q9Y4B6 1507 aa26.53■■□□□ 1.84
GFAP-206ENST00000585728 SHROOM4Q9ULL8 1493 aa26.23■■□□□ 1.79
GFAP-206ENST00000585728 SCRIBQ14160 1630 aa26.2■■□□□ 1.78
GFAP-206ENST00000585728 CC2D2AQ9P2K1 1620 aa25.97■■□□□ 1.75
GFAP-206ENST00000585728 EIF4G1Q04637 1599 aaKnown RBP25.91■■□□□ 1.74
GFAP-206ENST00000585728 CECR2Q9BXF3 1484 aa25.84■■□□□ 1.73
GFAP-206ENST00000585728 NCAPD3P42695 1498 aa25.09■■□□□ 1.61
GFAP-206ENST00000585728 SMARCA4P51532 1647 aa25.03■■□□□ 1.6
GFAP-206ENST00000585728 ATAD2BQ9ULI0 1458 aa25.01■■□□□ 1.59
GFAP-206ENST00000585728 SMARCA2P51531 1590 aa24.97■■□□□ 1.59
GFAP-206ENST00000585728 HMGXB3Q12766 1538 aa24.93■■□□□ 1.58
GFAP-206ENST00000585728 BAZ1AQ9NRL2 1556 aaPredicted RBP24.9■■□□□ 1.58
GFAP-206ENST00000585728 PEG3Q9GZU2 1588 aa24.8■■□□□ 1.56
GFAP-206ENST00000585728 BAZ1BQ9UIG0 1483 aaKnown RBP24.77■■□□□ 1.56
GFAP-206ENST00000585728 ERCC6Q03468 1493 aa24.76■■□□□ 1.55
GFAP-206ENST00000585728 CUX2O14529 1486 aa24.74■■□□□ 1.55
GFAP-206ENST00000585728 MROH2BQ7Z745 1585 aa24.7■■□□□ 1.54
GFAP-206ENST00000585728 NESP48681 1621 aa24.65■■□□□ 1.54
GFAP-206ENST00000585728 DNAJC5Q9H3Z4 198 aa24.64■■□□□ 1.54
GFAP-206ENST00000585728 LAMC3Q9Y6N6 1575 aa24.54■■□□□ 1.52
GFAP-206ENST00000585728 THOC2Q8NI27 1593 aaKnown RBP24.46■■□□□ 1.51
GFAP-206ENST00000585728 WIZO95785 1651 aa24.44■■□□□ 1.5
GFAP-206ENST00000585728 KIF21AQ7Z4S6 1674 aa24.43■■□□□ 1.5
GFAP-206ENST00000585728 PDS5BQ9NTI5 1447 aa24.35■■□□□ 1.49
GFAP-206ENST00000585728 CADPSQ9ULU8 1353 aa24.3■■□□□ 1.48
GFAP-206ENST00000585728 RSF1Q96T23 1441 aaPredicted RBP24.18■■□□□ 1.46
GFAP-206ENST00000585728 MRC2Q9UBG0 1479 aa24.15■■□□□ 1.46
GFAP-206ENST00000585728 WDR62O43379 1518 aa24.12■■□□□ 1.45
GFAP-206ENST00000585728 TOP2AP11388 1531 aaKnown RBP24.12■■□□□ 1.45
GFAP-206ENST00000585728 CEP164Q9UPV0 1460 aa24.07■■□□□ 1.44
GFAP-206ENST00000585728 CFTRP13569 1480 aa24.06■■□□□ 1.44
GFAP-206ENST00000585728 FANCD2Q9BXW9 1451 aa24.03■■□□□ 1.44
GFAP-206ENST00000585728 PRDM2Q13029 1718 aa23.96■■□□□ 1.43
GFAP-206ENST00000585728 URB2Q14146 1524 aaKnown RBP23.84■■□□□ 1.41
GFAP-206ENST00000585728 CCDC88BA6NC98 1476 aa23.82■■□□□ 1.4
GFAP-206ENST00000585728 TOPBP1Q92547 1522 aa23.6■■□□□ 1.37
GFAP-206ENST00000585728 IFT140Q96RY7 1462 aa23.59■■□□□ 1.37
GFAP-206ENST00000585728 ABCC8Q09428 1581 aa23.57■■□□□ 1.36
GFAP-206ENST00000585728 OSCARQ8IYS5 282 aa23.57■■□□□ 1.36
GFAP-206ENST00000585728 DNMBPQ6XZF7 1577 aa23.54■■□□□ 1.36
GFAP-206ENST00000585728 TRIM41Q8WV44 630 aa23.53■■□□□ 1.36
GFAP-206ENST00000585728 ZNF608Q9ULD9 1512 aaPredicted RBP23.53■■□□□ 1.36
GFAP-206ENST00000585728 EIF4G3O43432 1585 aaKnown RBP23.44■■□□□ 1.34
GFAP-206ENST00000585728 TARBP1Q13395 1621 aaKnown RBP23.42■■□□□ 1.34
GFAP-206ENST00000585728 POLA1P09884 1462 aaPredicted RBP23.36■■□□□ 1.33
GFAP-206ENST00000585728 RIMBP3CA6NJZ7 1639 aa23.33■■□□□ 1.32
GFAP-206ENST00000585728 RIMBP3BA6NNM3 1639 aa23.33■■□□□ 1.32
GFAP-206ENST00000585728 RIMBP3Q9UFD9 1639 aa23.33■■□□□ 1.32
GFAP-206ENST00000585728 AQRO60306 1485 aaKnown RBP eCLIP23.31■■□□□ 1.32
GFAP-206ENST00000585728 CHD1O14646 1710 aa23.3■■□□□ 1.32
GFAP-206ENST00000585728 RAD54L2Q9Y4B4 1467 aa23.24■■□□□ 1.31
GFAP-206ENST00000585728 SOGA1O94964 1423 aa23.23■■□□□ 1.31
GFAP-206ENST00000585728 ARHGEF11O15085 1522 aa23.23■■□□□ 1.31
GFAP-206ENST00000585728 WDR97A6NE52 1622 aa23.22■■□□□ 1.31
GFAP-206ENST00000585728 FGD5Q6ZNL6 1462 aa23.21■■□□□ 1.31
GFAP-206ENST00000585728 CUX1P39880 1505 aa23.2■■□□□ 1.3
GFAP-206ENST00000585728 TDRD9Q8NDG6 1382 aaKnown RBP23.15■■□□□ 1.3
GFAP-206ENST00000585728 FBLN2P98095 1184 aa23.1■■□□□ 1.29
GFAP-206ENST00000585728 SNAPC4Q5SXM2 1469 aa23.09■■□□□ 1.29
GFAP-206ENST00000585728 SUPT5HO00267 1087 aaKnown RBP23.08■■□□□ 1.29
GFAP-206ENST00000585728 MAGI1Q96QZ7 1491 aaPredicted RBP23.05■■□□□ 1.28
GFAP-206ENST00000585728 GRIN2BQ13224 1484 aa23.04■■□□□ 1.28
GFAP-206ENST00000585728 PBRM1Q86U86 1689 aa23.03■■□□□ 1.28
GFAP-206ENST00000585728 CYB5RLQ6IPT4 315 aa23■■□□□ 1.27
GFAP-206ENST00000585728 ARAP1Q96P48 1450 aa22.99■■□□□ 1.27
GFAP-206ENST00000585728 CLASP1Q7Z460 1538 aa22.99■■□□□ 1.27
GFAP-206ENST00000585728 SYNJ1O43426 1573 aa22.99■■□□□ 1.27
GFAP-206ENST00000585728 CHMP7Q8WUX9 453 aaPredicted RBP22.97■■□□□ 1.27
GFAP-206ENST00000585728 ABCA10Q8WWZ4 1543 aa22.97■■□□□ 1.27
GFAP-206ENST00000585728 SYNJ2O15056 1496 aa22.96■■□□□ 1.27
GFAP-206ENST00000585728 GAPVD1Q14C86 1478 aa22.96■■□□□ 1.27
GFAP-206ENST00000585728 ABCA5Q8WWZ7 1642 aa22.96■■□□□ 1.27
GFAP-206ENST00000585728 BIVM-ERCC5R4GMW8 1640 aa22.9■■□□□ 1.26
GFAP-206ENST00000585728 TOP2BQ02880 1626 aa22.87■■□□□ 1.25
GFAP-206ENST00000585728 WRNQ14191 1432 aaPredicted RBP eCLIP22.84■■□□□ 1.25
GFAP-206ENST00000585728 ADAMTS12P58397 1594 aa22.76■■□□□ 1.23
GFAP-206ENST00000585728 GRIN2AQ12879 1464 aa22.75■■□□□ 1.23
GFAP-206ENST00000585728 TRHP20396 242 aaPredicted RBP22.72■■□□□ 1.23
GFAP-206ENST00000585728 ERICH3Q5RHP9 1530 aa22.69■■□□□ 1.22
GFAP-206ENST00000585728 CEP170Q5SW79 1584 aa22.68■■□□□ 1.22
GFAP-206ENST00000585728 FHAD1B1AJZ9 1412 aa22.67■■□□□ 1.22
GFAP-206ENST00000585728 NUP160Q12769 1436 aa22.67■■□□□ 1.22
GFAP-206ENST00000585728 SHROOM2Q13796 1616 aa22.62■■□□□ 1.21
GFAP-206ENST00000585728 ERCC6L2Q5T890 1561 aa22.62■■□□□ 1.21
GFAP-206ENST00000585728 RUSC2Q8N2Y8 1516 aa22.45■■□□□ 1.18
GFAP-206ENST00000585728 PRG4Q92954 1404 aaPredicted RBP22.42■■□□□ 1.18
GFAP-206ENST00000585728 JPH4Q96JJ6 628 aa22.41■■□□□ 1.18
GFAP-206ENST00000585728 CUL7Q14999 1698 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms