RNA–Protein interactions for RNA: ENST00000585600.5

LAMA3-204, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 1,815 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-204ENST00000585600 NISCHQ9Y2I1 1504 aa52.45■■■■■ 5.99
LAMA3-204ENST00000585600 CCDC180Q9P1Z9 1646 aa45.99■■■■■ 4.95
LAMA3-204ENST00000585600 ABCC9O60706 1549 aa44.25■■■■■ 4.67
LAMA3-204ENST00000585600 ZCCHC6Q5VYS8 1495 aaKnown RBP43.91■■■■■ 4.62
LAMA3-204ENST00000585600 DCAF8L2P0C7V8 631 aa43.56■■■■■ 4.56
LAMA3-204ENST00000585600 DCAF1Q9Y4B6 1507 aa43.38■■■■■ 4.53
LAMA3-204ENST00000585600 MYO15BQ96JP2 1530 aa43.16■■■■■ 4.5
LAMA3-204ENST00000585600 NACADO15069 1562 aa43.08■■■■■ 4.49
LAMA3-204ENST00000585600 RB1CC1Q8TDY2 1594 aa42.86■■■■■ 4.45
LAMA3-204ENST00000585600 SHROOM4Q9ULL8 1493 aa42.23■■■■■ 4.35
LAMA3-204ENST00000585600 SCRIBQ14160 1630 aa42.21■■■■■ 4.35
LAMA3-204ENST00000585600 UNC13AQ9UPW8 1703 aa41.88■■■■■ 4.29
LAMA3-204ENST00000585600 BICRAQ9NZM4 1560 aa41.64■■■■■ 4.26
LAMA3-204ENST00000585600 PABPN1Q86U42 306 aaKnown RBP eCLIP41.63■■■■■ 4.26
LAMA3-204ENST00000585600 CECR2Q9BXF3 1484 aa40.85■■■■■ 4.13
LAMA3-204ENST00000585600 BAZ1AQ9NRL2 1556 aaPredicted RBP40.53■■■■■ 4.08
LAMA3-204ENST00000585600 MROH2BQ7Z745 1585 aa40.5■■■■■ 4.07
LAMA3-204ENST00000585600 SMARCA4P51532 1647 aa40.43■■■■■ 4.06
LAMA3-204ENST00000585600 RSF1Q96T23 1441 aaPredicted RBP40.43■■■■■ 4.06
LAMA3-204ENST00000585600 EIF4G1Q04637 1599 aaKnown RBP40.43■■■■■ 4.06
LAMA3-204ENST00000585600 SUPT5HO00267 1087 aaKnown RBP40.27■■■■■ 4.04
LAMA3-204ENST00000585600 WIZO95785 1651 aa40.07■■■■■ 4
LAMA3-204ENST00000585600 ATAD2BQ9ULI0 1458 aa40.03■■■■■ 4
LAMA3-204ENST00000585600 PEG3Q9GZU2 1588 aa40.01■■■■■ 4
LAMA3-204ENST00000585600 CC2D2AQ9P2K1 1620 aa40■■■■□ 3.99
LAMA3-204ENST00000585600 SMARCA2P51531 1590 aa39.92■■■■□ 3.98
LAMA3-204ENST00000585600 NCAPD3P42695 1498 aa39.83■■■■□ 3.97
LAMA3-204ENST00000585600 DNAJC5BQ9UF47 199 aa39.83■■■■□ 3.97
LAMA3-204ENST00000585600 BAZ1BQ9UIG0 1483 aaKnown RBP39.71■■■■□ 3.95
LAMA3-204ENST00000585600 TOP2AP11388 1531 aaKnown RBP39.65■■■■□ 3.94
LAMA3-204ENST00000585600 HMGXB3Q12766 1538 aa39.64■■■■□ 3.94
LAMA3-204ENST00000585600 CCDC88BA6NC98 1476 aa39.28■■■■□ 3.88
LAMA3-204ENST00000585600 CADPSQ9ULU8 1353 aa38.75■■■■□ 3.79
LAMA3-204ENST00000585600 CFTRP13569 1480 aa38.72■■■■□ 3.79
LAMA3-204ENST00000585600 NESP48681 1621 aa38.63■■■■□ 3.77
LAMA3-204ENST00000585600 LAMC3Q9Y6N6 1575 aa38.53■■■■□ 3.76
LAMA3-204ENST00000585600 PDS5BQ9NTI5 1447 aa38.29■■■■□ 3.72
LAMA3-204ENST00000585600 FANCD2Q9BXW9 1451 aa38.28■■■■□ 3.72
LAMA3-204ENST00000585600 PRDM2Q13029 1718 aa38.27■■■■□ 3.72
LAMA3-204ENST00000585600 CHIC1Q5VXU3 224 aa38.19■■■■□ 3.7
LAMA3-204ENST00000585600 ABCC8Q09428 1581 aa38.16■■■■□ 3.7
LAMA3-204ENST00000585600 CEP164Q9UPV0 1460 aa38.09■■■■□ 3.69
LAMA3-204ENST00000585600 WRNQ14191 1432 aaPredicted RBP eCLIP38.05■■■■□ 3.68
LAMA3-204ENST00000585600 KIF21AQ7Z4S6 1674 aa38.04■■■■□ 3.68
LAMA3-204ENST00000585600 ERCC6Q03468 1493 aa37.99■■■■□ 3.67
LAMA3-204ENST00000585600 TRIM41Q8WV44 630 aa37.93■■■■□ 3.66
LAMA3-204ENST00000585600 CUX1P39880 1505 aa37.91■■■■□ 3.66
LAMA3-204ENST00000585600 SYNJ1O43426 1573 aa37.89■■■■□ 3.66
LAMA3-204ENST00000585600 URB2Q14146 1524 aaKnown RBP37.86■■■■□ 3.65
LAMA3-204ENST00000585600 MRC2Q9UBG0 1479 aa37.82■■■■□ 3.65
LAMA3-204ENST00000585600 TOP2BQ02880 1626 aa37.78■■■■□ 3.64
LAMA3-204ENST00000585600 TOPBP1Q92547 1522 aa37.78■■■■□ 3.64
LAMA3-204ENST00000585600 DNMBPQ6XZF7 1577 aa37.76■■■■□ 3.64
LAMA3-204ENST00000585600 BIVM-ERCC5R4GMW8 1640 aa37.73■■■■□ 3.63
LAMA3-204ENST00000585600 THOC2Q8NI27 1593 aaKnown RBP37.69■■■■□ 3.62
LAMA3-204ENST00000585600 WDR62O43379 1518 aa37.65■■■■□ 3.62
LAMA3-204ENST00000585600 FGD5Q6ZNL6 1462 aa37.6■■■■□ 3.61
LAMA3-204ENST00000585600 POLA1P09884 1462 aaPredicted RBP37.55■■■■□ 3.6
LAMA3-204ENST00000585600 RAD54L2Q9Y4B4 1467 aa37.44■■■■□ 3.58
LAMA3-204ENST00000585600 SOGA1O94964 1423 aa37.43■■■■□ 3.58
LAMA3-204ENST00000585600 CUX2O14529 1486 aa37.41■■■■□ 3.58
LAMA3-204ENST00000585600 ABCA10Q8WWZ4 1543 aa37.27■■■■□ 3.56
LAMA3-204ENST00000585600 RUSC2Q8N2Y8 1516 aa37.26■■■■□ 3.56
LAMA3-204ENST00000585600 TARBP1Q13395 1621 aaKnown RBP37.26■■■■□ 3.55
LAMA3-204ENST00000585600 IFT140Q96RY7 1462 aa37.25■■■■□ 3.55
LAMA3-204ENST00000585600 FAM9AQ8IZU1 332 aaPredicted RBP37.2■■■■□ 3.55
LAMA3-204ENST00000585600 TDRD9Q8NDG6 1382 aaKnown RBP37.15■■■■□ 3.54
LAMA3-204ENST00000585600 KIF27Q86VH2 1401 aa37.14■■■■□ 3.54
LAMA3-204ENST00000585600 WDR97A6NE52 1622 aa37.13■■■■□ 3.53
LAMA3-204ENST00000585600 ZNF608Q9ULD9 1512 aaPredicted RBP37.1■■■■□ 3.53
LAMA3-204ENST00000585600 EEA1Q15075 1411 aa37.07■■■■□ 3.53
LAMA3-204ENST00000585600 AQRO60306 1485 aaKnown RBP eCLIP37.04■■■■□ 3.52
LAMA3-204ENST00000585600 CSRNP3Q8WYN3 585 aa37.01■■■■□ 3.51
LAMA3-204ENST00000585600 GAPVD1Q14C86 1478 aa36.99■■■■□ 3.51
LAMA3-204ENST00000585600 ABCA5Q8WWZ7 1642 aa36.98■■■■□ 3.51
LAMA3-204ENST00000585600 IGF1RP08069 1367 aa36.96■■■■□ 3.51
LAMA3-204ENST00000585600 EIF4G3O43432 1585 aaKnown RBP36.88■■■■□ 3.49
LAMA3-204ENST00000585600 GRIN2BQ13224 1484 aa36.81■■■■□ 3.48
LAMA3-204ENST00000585600 ERICH3Q5RHP9 1530 aa36.8■■■■□ 3.48
LAMA3-204ENST00000585600 PRXQ9BXM0 1461 aa36.74■■■■□ 3.47
LAMA3-204ENST00000585600 CARMIL1Q5VZK9 1371 aa36.73■■■■□ 3.47
LAMA3-204ENST00000585600 PBRM1Q86U86 1689 aa36.71■■■■□ 3.47
LAMA3-204ENST00000585600 LOC105371045A0A1W2PR82 267 aa36.71■■■■□ 3.47
LAMA3-204ENST00000585600 EHMT2Q96KQ7 1210 aa36.69■■■■□ 3.46
LAMA3-204ENST00000585600 SNAPC4Q5SXM2 1469 aa36.66■■■■□ 3.46
LAMA3-204ENST00000585600 RAPGEF2Q9Y4G8 1499 aa36.61■■■■□ 3.45
LAMA3-204ENST00000585600 KIF21BO75037 1637 aa36.59■■■■□ 3.45
LAMA3-204ENST00000585600 CUL7Q14999 1698 aa36.59■■■■□ 3.45
LAMA3-204ENST00000585600 FHAD1B1AJZ9 1412 aa36.59■■■■□ 3.45
LAMA3-204ENST00000585600 MAGI1Q96QZ7 1491 aaPredicted RBP36.58■■■■□ 3.45
LAMA3-204ENST00000585600 ADAMTS12P58397 1594 aa36.55■■■■□ 3.44
LAMA3-204ENST00000585600 GOLGA3Q08378 1498 aa36.52■■■■□ 3.44
LAMA3-204ENST00000585600 SYNJ2O15056 1496 aa36.45■■■■□ 3.43
LAMA3-204ENST00000585600 CHMP7Q8WUX9 453 aaPredicted RBP36.43■■■■□ 3.42
LAMA3-204ENST00000585600 UBTFP17480 764 aaKnown RBP36.42■■■■□ 3.42
LAMA3-204ENST00000585600 FBLN2P98095 1184 aa36.4■■■■□ 3.42
LAMA3-204ENST00000585600 GRIN2AQ12879 1464 aa36.35■■■■□ 3.41
LAMA3-204ENST00000585600 TNIKQ9UKE5 1360 aa36.3■■■■□ 3.4
LAMA3-204ENST00000585600 NUP160Q12769 1436 aa36.17■■■■□ 3.38
LAMA3-204ENST00000585600 CHD1O14646 1710 aa36.17■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms