RNA–Protein interactions for RNA: ENST00000585534.1

CNTNAP1-202, Transcript of contactin associated protein 1, humanhuman

TSL 3

Gene CNTNAP1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1-202ENST00000585534 NISCHQ9Y2I1 1504 aa28.93■■■□□ 2.22
CNTNAP1-202ENST00000585534 CCDC180Q9P1Z9 1646 aa25.84■■□□□ 1.73
CNTNAP1-202ENST00000585534 ABCC9O60706 1549 aa25.82■■□□□ 1.72
CNTNAP1-202ENST00000585534 RB1CC1Q8TDY2 1594 aa24.59■■□□□ 1.53
CNTNAP1-202ENST00000585534 DCAF8L2P0C7V8 631 aa24.54■■□□□ 1.52
CNTNAP1-202ENST00000585534 NACADO15069 1562 aa24.44■■□□□ 1.5
CNTNAP1-202ENST00000585534 DNAJC5BQ9UF47 199 aa24.13■■□□□ 1.45
CNTNAP1-202ENST00000585534 MYO15BQ96JP2 1530 aa24.12■■□□□ 1.45
CNTNAP1-202ENST00000585534 PABPN1Q86U42 306 aaKnown RBP eCLIP24.12■■□□□ 1.45
CNTNAP1-202ENST00000585534 UNC13AQ9UPW8 1703 aa23.98■■□□□ 1.43
CNTNAP1-202ENST00000585534 ZCCHC6Q5VYS8 1495 aaKnown RBP23.98■■□□□ 1.43
CNTNAP1-202ENST00000585534 DCAF1Q9Y4B6 1507 aa23.86■■□□□ 1.41
CNTNAP1-202ENST00000585534 BICRAQ9NZM4 1560 aa23.84■■□□□ 1.41
CNTNAP1-202ENST00000585534 SCRIBQ14160 1630 aa23.61■■□□□ 1.37
CNTNAP1-202ENST00000585534 SHROOM4Q9ULL8 1493 aa23.5■■□□□ 1.35
CNTNAP1-202ENST00000585534 CC2D2AQ9P2K1 1620 aa23.29■■□□□ 1.32
CNTNAP1-202ENST00000585534 EIF4G1Q04637 1599 aaKnown RBP23.26■■□□□ 1.31
CNTNAP1-202ENST00000585534 CECR2Q9BXF3 1484 aa23.23■■□□□ 1.31
CNTNAP1-202ENST00000585534 NCAPD3P42695 1498 aa22.59■■□□□ 1.21
CNTNAP1-202ENST00000585534 ATAD2BQ9ULI0 1458 aa22.54■■□□□ 1.2
CNTNAP1-202ENST00000585534 SMARCA4P51532 1647 aa22.52■■□□□ 1.2
CNTNAP1-202ENST00000585534 SMARCA2P51531 1590 aa22.47■■□□□ 1.19
CNTNAP1-202ENST00000585534 BAZ1AQ9NRL2 1556 aaPredicted RBP22.44■■□□□ 1.18
CNTNAP1-202ENST00000585534 HMGXB3Q12766 1538 aa22.38■■□□□ 1.17
CNTNAP1-202ENST00000585534 BAZ1BQ9UIG0 1483 aaKnown RBP22.33■■□□□ 1.16
CNTNAP1-202ENST00000585534 MROH2BQ7Z745 1585 aa22.3■■□□□ 1.16
CNTNAP1-202ENST00000585534 ERCC6Q03468 1493 aa22.29■■□□□ 1.16
CNTNAP1-202ENST00000585534 PEG3Q9GZU2 1588 aa22.27■■□□□ 1.16
CNTNAP1-202ENST00000585534 NESP48681 1621 aa22.2■■□□□ 1.14
CNTNAP1-202ENST00000585534 CUX2O14529 1486 aa22.15■■□□□ 1.14
CNTNAP1-202ENST00000585534 DNAJC5Q9H3Z4 198 aa22.06■■□□□ 1.12
CNTNAP1-202ENST00000585534 WIZO95785 1651 aa22.04■■□□□ 1.12
CNTNAP1-202ENST00000585534 LAMC3Q9Y6N6 1575 aa22.03■■□□□ 1.12
CNTNAP1-202ENST00000585534 PDS5BQ9NTI5 1447 aa21.96■■□□□ 1.11
CNTNAP1-202ENST00000585534 CADPSQ9ULU8 1353 aa21.93■■□□□ 1.1
CNTNAP1-202ENST00000585534 RSF1Q96T23 1441 aaPredicted RBP21.9■■□□□ 1.1
CNTNAP1-202ENST00000585534 KIF21AQ7Z4S6 1674 aa21.88■■□□□ 1.09
CNTNAP1-202ENST00000585534 THOC2Q8NI27 1593 aaKnown RBP21.87■■□□□ 1.09
CNTNAP1-202ENST00000585534 TOP2AP11388 1531 aaKnown RBP21.75■■□□□ 1.07
CNTNAP1-202ENST00000585534 MRC2Q9UBG0 1479 aa21.72■■□□□ 1.07
CNTNAP1-202ENST00000585534 CFTRP13569 1480 aa21.68■■□□□ 1.06
CNTNAP1-202ENST00000585534 FANCD2Q9BXW9 1451 aa21.67■■□□□ 1.06
CNTNAP1-202ENST00000585534 CEP164Q9UPV0 1460 aa21.67■■□□□ 1.06
CNTNAP1-202ENST00000585534 WDR62O43379 1518 aa21.63■■□□□ 1.05
CNTNAP1-202ENST00000585534 CCDC88BA6NC98 1476 aa21.54■■□□□ 1.04
CNTNAP1-202ENST00000585534 URB2Q14146 1524 aaKnown RBP21.46■■□□□ 1.03
CNTNAP1-202ENST00000585534 PRDM2Q13029 1718 aa21.41■■□□□ 1.02
CNTNAP1-202ENST00000585534 OSCARQ8IYS5 282 aa21.27■■□□□ 1
CNTNAP1-202ENST00000585534 TOPBP1Q92547 1522 aa21.26■□□□□ 0.99
CNTNAP1-202ENST00000585534 ABCC8Q09428 1581 aa21.24■□□□□ 0.99
CNTNAP1-202ENST00000585534 IFT140Q96RY7 1462 aa21.24■□□□□ 0.99
CNTNAP1-202ENST00000585534 TRIM41Q8WV44 630 aa21.2■□□□□ 0.98
CNTNAP1-202ENST00000585534 ZNF608Q9ULD9 1512 aaPredicted RBP21.19■□□□□ 0.98
CNTNAP1-202ENST00000585534 DNMBPQ6XZF7 1577 aa21.18■□□□□ 0.98
CNTNAP1-202ENST00000585534 SUPT5HO00267 1087 aaKnown RBP21.16■□□□□ 0.98
CNTNAP1-202ENST00000585534 AQRO60306 1485 aaKnown RBP eCLIP21.05■□□□□ 0.96
CNTNAP1-202ENST00000585534 POLA1P09884 1462 aaPredicted RBP21.05■□□□□ 0.96
CNTNAP1-202ENST00000585534 EIF4G3O43432 1585 aaKnown RBP21.04■□□□□ 0.96
CNTNAP1-202ENST00000585534 TARBP1Q13395 1621 aaKnown RBP21.03■□□□□ 0.96
CNTNAP1-202ENST00000585534 SOGA1O94964 1423 aa21.01■□□□□ 0.95
CNTNAP1-202ENST00000585534 RAD54L2Q9Y4B4 1467 aa21.01■□□□□ 0.95
CNTNAP1-202ENST00000585534 FBLN2P98095 1184 aa20.97■□□□□ 0.95
CNTNAP1-202ENST00000585534 TDRD9Q8NDG6 1382 aaKnown RBP20.96■□□□□ 0.95
CNTNAP1-202ENST00000585534 FGD5Q6ZNL6 1462 aa20.94■□□□□ 0.94
CNTNAP1-202ENST00000585534 CUX1P39880 1505 aa20.94■□□□□ 0.94
CNTNAP1-202ENST00000585534 RIMBP3CA6NJZ7 1639 aa20.87■□□□□ 0.93
CNTNAP1-202ENST00000585534 RIMBP3BA6NNM3 1639 aa20.87■□□□□ 0.93
CNTNAP1-202ENST00000585534 RIMBP3Q9UFD9 1639 aa20.87■□□□□ 0.93
CNTNAP1-202ENST00000585534 CHD1O14646 1710 aa20.87■□□□□ 0.93
CNTNAP1-202ENST00000585534 ARHGEF11O15085 1522 aa20.83■□□□□ 0.93
CNTNAP1-202ENST00000585534 CHMP7Q8WUX9 453 aaPredicted RBP20.81■□□□□ 0.92
CNTNAP1-202ENST00000585534 SNAPC4Q5SXM2 1469 aa20.81■□□□□ 0.92
CNTNAP1-202ENST00000585534 WDR97A6NE52 1622 aa20.8■□□□□ 0.92
CNTNAP1-202ENST00000585534 GRIN2BQ13224 1484 aa20.78■□□□□ 0.92
CNTNAP1-202ENST00000585534 CYB5RLQ6IPT4 315 aa20.78■□□□□ 0.92
CNTNAP1-202ENST00000585534 MAGI1Q96QZ7 1491 aaPredicted RBP20.75■□□□□ 0.91
CNTNAP1-202ENST00000585534 GAPVD1Q14C86 1478 aa20.73■□□□□ 0.91
CNTNAP1-202ENST00000585534 ABCA10Q8WWZ4 1543 aa20.7■□□□□ 0.9
CNTNAP1-202ENST00000585534 WRNQ14191 1432 aaPredicted RBP eCLIP20.69■□□□□ 0.9
CNTNAP1-202ENST00000585534 SYNJ2O15056 1496 aa20.69■□□□□ 0.9
CNTNAP1-202ENST00000585534 PBRM1Q86U86 1689 aa20.65■□□□□ 0.9
CNTNAP1-202ENST00000585534 SYNJ1O43426 1573 aa20.65■□□□□ 0.9
CNTNAP1-202ENST00000585534 TOP2BQ02880 1626 aa20.63■□□□□ 0.89
CNTNAP1-202ENST00000585534 ARAP1Q96P48 1450 aa20.62■□□□□ 0.89
CNTNAP1-202ENST00000585534 ABCA5Q8WWZ7 1642 aa20.62■□□□□ 0.89
CNTNAP1-202ENST00000585534 CLASP1Q7Z460 1538 aa20.61■□□□□ 0.89
CNTNAP1-202ENST00000585534 BIVM-ERCC5R4GMW8 1640 aa20.6■□□□□ 0.89
CNTNAP1-202ENST00000585534 TRHP20396 242 aaPredicted RBP20.53■□□□□ 0.88
CNTNAP1-202ENST00000585534 GRIN2AQ12879 1464 aa20.5■□□□□ 0.87
CNTNAP1-202ENST00000585534 FHAD1B1AJZ9 1412 aa20.47■□□□□ 0.87
CNTNAP1-202ENST00000585534 ADAMTS12P58397 1594 aa20.46■□□□□ 0.87
CNTNAP1-202ENST00000585534 ERICH3Q5RHP9 1530 aa20.44■□□□□ 0.86
CNTNAP1-202ENST00000585534 NUP160Q12769 1436 aa20.41■□□□□ 0.86
CNTNAP1-202ENST00000585534 CEP170Q5SW79 1584 aa20.4■□□□□ 0.86
CNTNAP1-202ENST00000585534 ERCC6L2Q5T890 1561 aa20.34■□□□□ 0.85
CNTNAP1-202ENST00000585534 JPH4Q96JJ6 628 aa20.3■□□□□ 0.84
CNTNAP1-202ENST00000585534 KIF27Q86VH2 1401 aa20.28■□□□□ 0.84
CNTNAP1-202ENST00000585534 SHROOM2Q13796 1616 aa20.27■□□□□ 0.84
CNTNAP1-202ENST00000585534 IGF1RP08069 1367 aa20.27■□□□□ 0.84
CNTNAP1-202ENST00000585534 PRG4Q92954 1404 aaPredicted RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms