RNA–Protein interactions for RNA: ENST00000585503.1

JRK-204, Transcript of Jrk helix-turn-helix protein, humanhuman

TSL 2

Gene JRK, Length 1,175 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
JRK-204ENST00000585503 NISCHQ9Y2I1 1504 aa36.12■■■■□ 3.37
JRK-204ENST00000585503 CCDC180Q9P1Z9 1646 aa32.41■■■□□ 2.78
JRK-204ENST00000585503 ABCC9O60706 1549 aa32.31■■■□□ 2.76
JRK-204ENST00000585503 RB1CC1Q8TDY2 1594 aa30.82■■■□□ 2.52
JRK-204ENST00000585503 NACADO15069 1562 aa30.62■■■□□ 2.49
JRK-204ENST00000585503 DCAF8L2P0C7V8 631 aa30.45■■■□□ 2.47
JRK-204ENST00000585503 DNAJC5BQ9UF47 199 aa30.24■■■□□ 2.43
JRK-204ENST00000585503 MYO15BQ96JP2 1530 aa30.22■■■□□ 2.43
JRK-204ENST00000585503 UNC13AQ9UPW8 1703 aa30.1■■■□□ 2.41
JRK-204ENST00000585503 PABPN1Q86U42 306 aaKnown RBP eCLIP30.09■■■□□ 2.41
JRK-204ENST00000585503 ZCCHC6Q5VYS8 1495 aaKnown RBP29.94■■■□□ 2.38
JRK-204ENST00000585503 BICRAQ9NZM4 1560 aa29.89■■■□□ 2.38
JRK-204ENST00000585503 DCAF1Q9Y4B6 1507 aa29.86■■■□□ 2.37
JRK-204ENST00000585503 SHROOM4Q9ULL8 1493 aa29.55■■■□□ 2.32
JRK-204ENST00000585503 SCRIBQ14160 1630 aa29.5■■■□□ 2.31
JRK-204ENST00000585503 CC2D2AQ9P2K1 1620 aa29.2■■■□□ 2.27
JRK-204ENST00000585503 EIF4G1Q04637 1599 aaKnown RBP29.16■■■□□ 2.26
JRK-204ENST00000585503 CECR2Q9BXF3 1484 aa29.12■■■□□ 2.25
JRK-204ENST00000585503 NCAPD3P42695 1498 aa28.26■■■□□ 2.11
JRK-204ENST00000585503 ATAD2BQ9ULI0 1458 aa28.17■■■□□ 2.1
JRK-204ENST00000585503 SMARCA4P51532 1647 aa28.17■■■□□ 2.1
JRK-204ENST00000585503 SMARCA2P51531 1590 aa28.12■■■□□ 2.09
JRK-204ENST00000585503 HMGXB3Q12766 1538 aa28.06■■■□□ 2.08
JRK-204ENST00000585503 BAZ1AQ9NRL2 1556 aaPredicted RBP28.05■■■□□ 2.08
JRK-204ENST00000585503 ERCC6Q03468 1493 aa27.92■■■□□ 2.06
JRK-204ENST00000585503 BAZ1BQ9UIG0 1483 aaKnown RBP27.91■■■□□ 2.06
JRK-204ENST00000585503 PEG3Q9GZU2 1588 aa27.9■■■□□ 2.06
JRK-204ENST00000585503 CUX2O14529 1486 aa27.86■■■□□ 2.05
JRK-204ENST00000585503 MROH2BQ7Z745 1585 aa27.82■■■□□ 2.04
JRK-204ENST00000585503 DNAJC5Q9H3Z4 198 aa27.81■■■□□ 2.04
JRK-204ENST00000585503 NESP48681 1621 aa27.77■■■□□ 2.04
JRK-204ENST00000585503 LAMC3Q9Y6N6 1575 aa27.63■■■□□ 2.01
JRK-204ENST00000585503 THOC2Q8NI27 1593 aaKnown RBP27.49■■□□□ 1.99
JRK-204ENST00000585503 WIZO95785 1651 aa27.49■■□□□ 1.99
JRK-204ENST00000585503 PDS5BQ9NTI5 1447 aa27.47■■□□□ 1.99
JRK-204ENST00000585503 KIF21AQ7Z4S6 1674 aa27.43■■□□□ 1.98
JRK-204ENST00000585503 CADPSQ9ULU8 1353 aa27.4■■□□□ 1.98
JRK-204ENST00000585503 RSF1Q96T23 1441 aaPredicted RBP27.26■■□□□ 1.95
JRK-204ENST00000585503 MRC2Q9UBG0 1479 aa27.22■■□□□ 1.95
JRK-204ENST00000585503 TOP2AP11388 1531 aaKnown RBP27.16■■□□□ 1.94
JRK-204ENST00000585503 WDR62O43379 1518 aa27.14■■□□□ 1.94
JRK-204ENST00000585503 CEP164Q9UPV0 1460 aa27.13■■□□□ 1.93
JRK-204ENST00000585503 CFTRP13569 1480 aa27.1■■□□□ 1.93
JRK-204ENST00000585503 FANCD2Q9BXW9 1451 aa27.09■■□□□ 1.93
JRK-204ENST00000585503 PRDM2Q13029 1718 aa26.86■■□□□ 1.89
JRK-204ENST00000585503 URB2Q14146 1524 aaKnown RBP26.85■■□□□ 1.89
JRK-204ENST00000585503 CCDC88BA6NC98 1476 aa26.84■■□□□ 1.89
JRK-204ENST00000585503 OSCARQ8IYS5 282 aa26.6■■□□□ 1.85
JRK-204ENST00000585503 IFT140Q96RY7 1462 aa26.58■■□□□ 1.85
JRK-204ENST00000585503 TOPBP1Q92547 1522 aa26.58■■□□□ 1.85
JRK-204ENST00000585503 ABCC8Q09428 1581 aa26.56■■□□□ 1.84
JRK-204ENST00000585503 TRIM41Q8WV44 630 aa26.56■■□□□ 1.84
JRK-204ENST00000585503 ZNF608Q9ULD9 1512 aaPredicted RBP26.5■■□□□ 1.83
JRK-204ENST00000585503 DNMBPQ6XZF7 1577 aa26.5■■□□□ 1.83
JRK-204ENST00000585503 EIF4G3O43432 1585 aaKnown RBP26.37■■□□□ 1.81
JRK-204ENST00000585503 TARBP1Q13395 1621 aaKnown RBP26.34■■□□□ 1.81
JRK-204ENST00000585503 POLA1P09884 1462 aaPredicted RBP26.31■■□□□ 1.8
JRK-204ENST00000585503 AQRO60306 1485 aaKnown RBP eCLIP26.28■■□□□ 1.8
JRK-204ENST00000585503 RIMBP3CA6NJZ7 1639 aa26.23■■□□□ 1.79
JRK-204ENST00000585503 RIMBP3BA6NNM3 1639 aa26.23■■□□□ 1.79
JRK-204ENST00000585503 RIMBP3Q9UFD9 1639 aa26.23■■□□□ 1.79
JRK-204ENST00000585503 RAD54L2Q9Y4B4 1467 aa26.2■■□□□ 1.78
JRK-204ENST00000585503 SOGA1O94964 1423 aa26.2■■□□□ 1.78
JRK-204ENST00000585503 CHD1O14646 1710 aa26.17■■□□□ 1.78
JRK-204ENST00000585503 FGD5Q6ZNL6 1462 aa26.16■■□□□ 1.78
JRK-204ENST00000585503 ARHGEF11O15085 1522 aa26.15■■□□□ 1.78
JRK-204ENST00000585503 CUX1P39880 1505 aa26.14■■□□□ 1.77
JRK-204ENST00000585503 TDRD9Q8NDG6 1382 aaKnown RBP26.12■■□□□ 1.77
JRK-204ENST00000585503 WDR97A6NE52 1622 aa26.11■■□□□ 1.77
JRK-204ENST00000585503 SUPT5HO00267 1087 aaKnown RBP26.1■■□□□ 1.77
JRK-204ENST00000585503 FBLN2P98095 1184 aa26.1■■□□□ 1.77
JRK-204ENST00000585503 SNAPC4Q5SXM2 1469 aa26.02■■□□□ 1.76
JRK-204ENST00000585503 GRIN2BQ13224 1484 aa25.98■■□□□ 1.75
JRK-204ENST00000585503 MAGI1Q96QZ7 1491 aaPredicted RBP25.98■■□□□ 1.75
JRK-204ENST00000585503 CYB5RLQ6IPT4 315 aa25.96■■□□□ 1.75
JRK-204ENST00000585503 CHMP7Q8WUX9 453 aaPredicted RBP25.94■■□□□ 1.74
JRK-204ENST00000585503 ARAP1Q96P48 1450 aa25.9■■□□□ 1.74
JRK-204ENST00000585503 GAPVD1Q14C86 1478 aa25.89■■□□□ 1.73
JRK-204ENST00000585503 SYNJ1O43426 1573 aa25.89■■□□□ 1.73
JRK-204ENST00000585503 SYNJ2O15056 1496 aa25.88■■□□□ 1.73
JRK-204ENST00000585503 CLASP1Q7Z460 1538 aa25.88■■□□□ 1.73
JRK-204ENST00000585503 PBRM1Q86U86 1689 aa25.87■■□□□ 1.73
JRK-204ENST00000585503 ABCA10Q8WWZ4 1543 aa25.87■■□□□ 1.73
JRK-204ENST00000585503 ABCA5Q8WWZ7 1642 aa25.82■■□□□ 1.72
JRK-204ENST00000585503 WRNQ14191 1432 aaPredicted RBP eCLIP25.79■■□□□ 1.72
JRK-204ENST00000585503 BIVM-ERCC5R4GMW8 1640 aa25.75■■□□□ 1.71
JRK-204ENST00000585503 TOP2BQ02880 1626 aa25.74■■□□□ 1.71
JRK-204ENST00000585503 TRHP20396 242 aaPredicted RBP25.66■■□□□ 1.7
JRK-204ENST00000585503 GRIN2AQ12879 1464 aa25.63■■□□□ 1.69
JRK-204ENST00000585503 ADAMTS12P58397 1594 aa25.62■■□□□ 1.69
JRK-204ENST00000585503 FHAD1B1AJZ9 1412 aa25.57■■□□□ 1.68
JRK-204ENST00000585503 ERICH3Q5RHP9 1530 aa25.56■■□□□ 1.68
JRK-204ENST00000585503 NUP160Q12769 1436 aa25.54■■□□□ 1.68
JRK-204ENST00000585503 CEP170Q5SW79 1584 aa25.52■■□□□ 1.68
JRK-204ENST00000585503 ERCC6L2Q5T890 1561 aa25.45■■□□□ 1.66
JRK-204ENST00000585503 SHROOM2Q13796 1616 aa25.42■■□□□ 1.66
JRK-204ENST00000585503 PRG4Q92954 1404 aaPredicted RBP25.29■■□□□ 1.64
JRK-204ENST00000585503 JPH4Q96JJ6 628 aa25.29■■□□□ 1.64
JRK-204ENST00000585503 KIF27Q86VH2 1401 aa25.26■■□□□ 1.63
JRK-204ENST00000585503 RUSC2Q8N2Y8 1516 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms