RNA–Protein interactions for RNA: ENST00000585456.1

KDSR-203, Transcript of 3-ketodihydrosphingosine reductase, humanhuman

TSL 3

Gene KDSR, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDSR-203ENST00000585456 NISCHQ9Y2I1 1504 aa30.75■■■□□ 2.51
KDSR-203ENST00000585456 ABCC9O60706 1549 aa28.07■■■□□ 2.08
KDSR-203ENST00000585456 CCDC180Q9P1Z9 1646 aa27.66■■■□□ 2.02
KDSR-203ENST00000585456 DNAJC5BQ9UF47 199 aa26.72■■□□□ 1.87
KDSR-203ENST00000585456 RB1CC1Q8TDY2 1594 aa26.49■■□□□ 1.83
KDSR-203ENST00000585456 NACADO15069 1562 aa26.24■■□□□ 1.79
KDSR-203ENST00000585456 DCAF8L2P0C7V8 631 aa26.17■■□□□ 1.78
KDSR-203ENST00000585456 PABPN1Q86U42 306 aaKnown RBP eCLIP26.14■■□□□ 1.78
KDSR-203ENST00000585456 UNC13AQ9UPW8 1703 aa26■■□□□ 1.75
KDSR-203ENST00000585456 BICRAQ9NZM4 1560 aa25.82■■□□□ 1.72
KDSR-203ENST00000585456 MYO15BQ96JP2 1530 aa25.74■■□□□ 1.71
KDSR-203ENST00000585456 ZCCHC6Q5VYS8 1495 aaKnown RBP25.4■■□□□ 1.66
KDSR-203ENST00000585456 CC2D2AQ9P2K1 1620 aa25.32■■□□□ 1.64
KDSR-203ENST00000585456 DCAF1Q9Y4B6 1507 aa25.32■■□□□ 1.64
KDSR-203ENST00000585456 CECR2Q9BXF3 1484 aa25.28■■□□□ 1.64
KDSR-203ENST00000585456 SHROOM4Q9ULL8 1493 aa25.27■■□□□ 1.64
KDSR-203ENST00000585456 SCRIBQ14160 1630 aa25.26■■□□□ 1.63
KDSR-203ENST00000585456 EIF4G1Q04637 1599 aaKnown RBP25.17■■□□□ 1.62
KDSR-203ENST00000585456 DNAJC5Q9H3Z4 198 aa24.67■■□□□ 1.54
KDSR-203ENST00000585456 NCAPD3P42695 1498 aa24.26■■□□□ 1.47
KDSR-203ENST00000585456 CUX2O14529 1486 aa24.22■■□□□ 1.47
KDSR-203ENST00000585456 ERCC6Q03468 1493 aa24.18■■□□□ 1.46
KDSR-203ENST00000585456 ATAD2BQ9ULI0 1458 aa24.16■■□□□ 1.46
KDSR-203ENST00000585456 NESP48681 1621 aa24.06■■□□□ 1.44
KDSR-203ENST00000585456 SMARCA4P51532 1647 aa24.05■■□□□ 1.44
KDSR-203ENST00000585456 SMARCA2P51531 1590 aa24.01■■□□□ 1.43
KDSR-203ENST00000585456 HMGXB3Q12766 1538 aa24■■□□□ 1.43
KDSR-203ENST00000585456 BAZ1BQ9UIG0 1483 aaKnown RBP23.87■■□□□ 1.41
KDSR-203ENST00000585456 BAZ1AQ9NRL2 1556 aaPredicted RBP23.84■■□□□ 1.41
KDSR-203ENST00000585456 THOC2Q8NI27 1593 aaKnown RBP23.8■■□□□ 1.4
KDSR-203ENST00000585456 PEG3Q9GZU2 1588 aa23.79■■□□□ 1.4
KDSR-203ENST00000585456 MROH2BQ7Z745 1585 aa23.74■■□□□ 1.39
KDSR-203ENST00000585456 LAMC3Q9Y6N6 1575 aa23.73■■□□□ 1.39
KDSR-203ENST00000585456 KIF21AQ7Z4S6 1674 aa23.7■■□□□ 1.39
KDSR-203ENST00000585456 PDS5BQ9NTI5 1447 aa23.6■■□□□ 1.37
KDSR-203ENST00000585456 CADPSQ9ULU8 1353 aa23.52■■□□□ 1.36
KDSR-203ENST00000585456 TRIM41Q8WV44 630 aa23.47■■□□□ 1.35
KDSR-203ENST00000585456 WIZO95785 1651 aa23.44■■□□□ 1.34
KDSR-203ENST00000585456 MRC2Q9UBG0 1479 aa23.43■■□□□ 1.34
KDSR-203ENST00000585456 WDR62O43379 1518 aa23.38■■□□□ 1.33
KDSR-203ENST00000585456 CEP164Q9UPV0 1460 aa23.26■■□□□ 1.31
KDSR-203ENST00000585456 FANCD2Q9BXW9 1451 aa23.24■■□□□ 1.31
KDSR-203ENST00000585456 CFTRP13569 1480 aa23.17■■□□□ 1.3
KDSR-203ENST00000585456 OSCARQ8IYS5 282 aa23.13■■□□□ 1.29
KDSR-203ENST00000585456 RSF1Q96T23 1441 aaPredicted RBP23.12■■□□□ 1.29
KDSR-203ENST00000585456 URB2Q14146 1524 aaKnown RBP23.11■■□□□ 1.29
KDSR-203ENST00000585456 TOP2AP11388 1531 aaKnown RBP23.04■■□□□ 1.28
KDSR-203ENST00000585456 PRDM2Q13029 1718 aa22.9■■□□□ 1.26
KDSR-203ENST00000585456 ZNF608Q9ULD9 1512 aaPredicted RBP22.89■■□□□ 1.26
KDSR-203ENST00000585456 RIMBP3CA6NJZ7 1639 aa22.87■■□□□ 1.25
KDSR-203ENST00000585456 RIMBP3BA6NNM3 1639 aa22.87■■□□□ 1.25
KDSR-203ENST00000585456 RIMBP3Q9UFD9 1639 aa22.87■■□□□ 1.25
KDSR-203ENST00000585456 CCDC88BA6NC98 1476 aa22.85■■□□□ 1.25
KDSR-203ENST00000585456 IFT140Q96RY7 1462 aa22.81■■□□□ 1.24
KDSR-203ENST00000585456 TOPBP1Q92547 1522 aa22.78■■□□□ 1.24
KDSR-203ENST00000585456 ARHGEF11O15085 1522 aa22.75■■□□□ 1.23
KDSR-203ENST00000585456 EIF4G3O43432 1585 aaKnown RBP22.68■■□□□ 1.22
KDSR-203ENST00000585456 CYB5RLQ6IPT4 315 aa22.67■■□□□ 1.22
KDSR-203ENST00000585456 AQRO60306 1485 aaKnown RBP eCLIP22.65■■□□□ 1.22
KDSR-203ENST00000585456 ABCC8Q09428 1581 aa22.64■■□□□ 1.22
KDSR-203ENST00000585456 DNMBPQ6XZF7 1577 aa22.63■■□□□ 1.21
KDSR-203ENST00000585456 CHD1O14646 1710 aa22.62■■□□□ 1.21
KDSR-203ENST00000585456 TARBP1Q13395 1621 aaKnown RBP22.61■■□□□ 1.21
KDSR-203ENST00000585456 FBLN2P98095 1184 aa22.55■■□□□ 1.2
KDSR-203ENST00000585456 POLA1P09884 1462 aaPredicted RBP22.53■■□□□ 1.2
KDSR-203ENST00000585456 ARAP1Q96P48 1450 aa22.52■■□□□ 1.2
KDSR-203ENST00000585456 RAD54L2Q9Y4B4 1467 aa22.51■■□□□ 1.19
KDSR-203ENST00000585456 TRHP20396 242 aaPredicted RBP22.48■■□□□ 1.19
KDSR-203ENST00000585456 TDRD9Q8NDG6 1382 aaKnown RBP22.47■■□□□ 1.19
KDSR-203ENST00000585456 SOGA1O94964 1423 aa22.43■■□□□ 1.18
KDSR-203ENST00000585456 SNAPC4Q5SXM2 1469 aa22.35■■□□□ 1.17
KDSR-203ENST00000585456 FGD5Q6ZNL6 1462 aa22.34■■□□□ 1.17
KDSR-203ENST00000585456 CLASP1Q7Z460 1538 aa22.32■■□□□ 1.16
KDSR-203ENST00000585456 CHMP7Q8WUX9 453 aaPredicted RBP22.31■■□□□ 1.16
KDSR-203ENST00000585456 CUX1P39880 1505 aa22.3■■□□□ 1.16
KDSR-203ENST00000585456 WDR97A6NE52 1622 aa22.24■■□□□ 1.15
KDSR-203ENST00000585456 MAGI1Q96QZ7 1491 aaPredicted RBP22.24■■□□□ 1.15
KDSR-203ENST00000585456 SYNJ1O43426 1573 aa22.23■■□□□ 1.15
KDSR-203ENST00000585456 GRIN2BQ13224 1484 aa22.22■■□□□ 1.15
KDSR-203ENST00000585456 SYNJ2O15056 1496 aa22.2■■□□□ 1.14
KDSR-203ENST00000585456 PBRM1Q86U86 1689 aa22.14■■□□□ 1.14
KDSR-203ENST00000585456 GAPVD1Q14C86 1478 aa22.13■■□□□ 1.13
KDSR-203ENST00000585456 ABCA5Q8WWZ7 1642 aa22.05■■□□□ 1.12
KDSR-203ENST00000585456 ABCA10Q8WWZ4 1543 aa22.05■■□□□ 1.12
KDSR-203ENST00000585456 ERCC6L2Q5T890 1561 aa22.04■■□□□ 1.12
KDSR-203ENST00000585456 AEBP2Q6ZN18 517 aaPredicted RBP22■■□□□ 1.11
KDSR-203ENST00000585456 GRIN2AQ12879 1464 aa21.96■■□□□ 1.11
KDSR-203ENST00000585456 CEP170Q5SW79 1584 aa21.93■■□□□ 1.1
KDSR-203ENST00000585456 SUPT5HO00267 1087 aaKnown RBP21.92■■□□□ 1.1
KDSR-203ENST00000585456 NUP160Q12769 1436 aa21.9■■□□□ 1.1
KDSR-203ENST00000585456 ADAMTS12P58397 1594 aa21.9■■□□□ 1.1
KDSR-203ENST00000585456 WRNQ14191 1432 aaPredicted RBP eCLIP21.89■■□□□ 1.1
KDSR-203ENST00000585456 SHROOM2Q13796 1616 aa21.84■■□□□ 1.09
KDSR-203ENST00000585456 TOP2BQ02880 1626 aa21.82■■□□□ 1.08
KDSR-203ENST00000585456 BIVM-ERCC5R4GMW8 1640 aa21.82■■□□□ 1.08
KDSR-203ENST00000585456 FHAD1B1AJZ9 1412 aa21.81■■□□□ 1.08
KDSR-203ENST00000585456 KIF13AQ9H1H9 1805 aa21.77■■□□□ 1.08
KDSR-203ENST00000585456 ERICH3Q5RHP9 1530 aa21.75■■□□□ 1.07
KDSR-203ENST00000585456 PRG4Q92954 1404 aaPredicted RBP21.73■■□□□ 1.07
KDSR-203ENST00000585456 JPH4Q96JJ6 628 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms