RNA–Protein interactions for RNA: ENST00000585400.1

NPHS1-203, Transcript of NPHS1, nephrin, humanhuman

TSL 1 (best)

Gene NPHS1, Length 999 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1-203ENST00000585400 NISCHQ9Y2I1 1504 aa54.44■■■■■ 6.3
NPHS1-203ENST00000585400 CCDC180Q9P1Z9 1646 aa48.32■■■■■ 5.33
NPHS1-203ENST00000585400 ABCC9O60706 1549 aa47.54■■■■■ 5.2
NPHS1-203ENST00000585400 DCAF8L2P0C7V8 631 aa45.57■■■■■ 4.89
NPHS1-203ENST00000585400 RB1CC1Q8TDY2 1594 aa45.5■■■■■ 4.87
NPHS1-203ENST00000585400 NACADO15069 1562 aa45.45■■■■■ 4.87
NPHS1-203ENST00000585400 ZCCHC6Q5VYS8 1495 aaKnown RBP45.36■■■■■ 4.85
NPHS1-203ENST00000585400 MYO15BQ96JP2 1530 aa45.16■■■■■ 4.82
NPHS1-203ENST00000585400 DCAF1Q9Y4B6 1507 aa45.01■■■■■ 4.8
NPHS1-203ENST00000585400 UNC13AQ9UPW8 1703 aa44.41■■■■■ 4.7
NPHS1-203ENST00000585400 PABPN1Q86U42 306 aaKnown RBP eCLIP44.29■■■■■ 4.68
NPHS1-203ENST00000585400 SCRIBQ14160 1630 aa44.17■■■■■ 4.66
NPHS1-203ENST00000585400 BICRAQ9NZM4 1560 aa44.13■■■■■ 4.65
NPHS1-203ENST00000585400 DNAJC5BQ9UF47 199 aa44.09■■■■■ 4.65
NPHS1-203ENST00000585400 SHROOM4Q9ULL8 1493 aa43.63■■■■■ 4.57
NPHS1-203ENST00000585400 EIF4G1Q04637 1599 aaKnown RBP42.97■■■■■ 4.47
NPHS1-203ENST00000585400 CC2D2AQ9P2K1 1620 aa42.93■■■■■ 4.46
NPHS1-203ENST00000585400 CECR2Q9BXF3 1484 aa42.74■■■■■ 4.43
NPHS1-203ENST00000585400 SMARCA4P51532 1647 aa42.23■■■■■ 4.35
NPHS1-203ENST00000585400 BAZ1AQ9NRL2 1556 aaPredicted RBP42.18■■■■■ 4.34
NPHS1-203ENST00000585400 ATAD2BQ9ULI0 1458 aa42■■■■■ 4.31
NPHS1-203ENST00000585400 MROH2BQ7Z745 1585 aa41.97■■■■■ 4.31
NPHS1-203ENST00000585400 NCAPD3P42695 1498 aa41.96■■■■■ 4.31
NPHS1-203ENST00000585400 SMARCA2P51531 1590 aa41.94■■■■■ 4.3
NPHS1-203ENST00000585400 PEG3Q9GZU2 1588 aa41.77■■■■■ 4.28
NPHS1-203ENST00000585400 HMGXB3Q12766 1538 aa41.74■■■■■ 4.27
NPHS1-203ENST00000585400 BAZ1BQ9UIG0 1483 aaKnown RBP41.67■■■■■ 4.26
NPHS1-203ENST00000585400 RSF1Q96T23 1441 aaPredicted RBP41.52■■■■■ 4.24
NPHS1-203ENST00000585400 WIZO95785 1651 aa41.51■■■■■ 4.24
NPHS1-203ENST00000585400 TOP2AP11388 1531 aaKnown RBP41.08■■■■■ 4.17
NPHS1-203ENST00000585400 ERCC6Q03468 1493 aa41.07■■■■■ 4.16
NPHS1-203ENST00000585400 NESP48681 1621 aa40.98■■■■■ 4.15
NPHS1-203ENST00000585400 LAMC3Q9Y6N6 1575 aa40.82■■■■■ 4.13
NPHS1-203ENST00000585400 CADPSQ9ULU8 1353 aa40.76■■■■■ 4.12
NPHS1-203ENST00000585400 CUX2O14529 1486 aa40.76■■■■■ 4.12
NPHS1-203ENST00000585400 CCDC88BA6NC98 1476 aa40.61■■■■■ 4.09
NPHS1-203ENST00000585400 PDS5BQ9NTI5 1447 aa40.59■■■■■ 4.09
NPHS1-203ENST00000585400 SUPT5HO00267 1087 aaKnown RBP40.57■■■■■ 4.09
NPHS1-203ENST00000585400 CFTRP13569 1480 aa40.51■■■■■ 4.08
NPHS1-203ENST00000585400 KIF21AQ7Z4S6 1674 aa40.44■■■■■ 4.06
NPHS1-203ENST00000585400 THOC2Q8NI27 1593 aaKnown RBP40.44■■■■■ 4.06
NPHS1-203ENST00000585400 FANCD2Q9BXW9 1451 aa40.3■■■■■ 4.04
NPHS1-203ENST00000585400 CEP164Q9UPV0 1460 aa40.25■■■■■ 4.03
NPHS1-203ENST00000585400 DNAJC5Q9H3Z4 198 aa40.2■■■■■ 4.03
NPHS1-203ENST00000585400 MRC2Q9UBG0 1479 aa40.18■■■■■ 4.02
NPHS1-203ENST00000585400 PRDM2Q13029 1718 aa40.13■■■■■ 4.01
NPHS1-203ENST00000585400 WDR62O43379 1518 aa40.01■■■■■ 4
NPHS1-203ENST00000585400 URB2Q14146 1524 aaKnown RBP39.89■■■■□ 3.98
NPHS1-203ENST00000585400 TOPBP1Q92547 1522 aa39.65■■■■□ 3.94
NPHS1-203ENST00000585400 ABCC8Q09428 1581 aa39.62■■■■□ 3.93
NPHS1-203ENST00000585400 DNMBPQ6XZF7 1577 aa39.59■■■■□ 3.93
NPHS1-203ENST00000585400 IFT140Q96RY7 1462 aa39.39■■■■□ 3.9
NPHS1-203ENST00000585400 CUX1P39880 1505 aa39.38■■■■□ 3.89
NPHS1-203ENST00000585400 POLA1P09884 1462 aaPredicted RBP39.32■■■■□ 3.89
NPHS1-203ENST00000585400 FGD5Q6ZNL6 1462 aa39.24■■■■□ 3.87
NPHS1-203ENST00000585400 ZNF608Q9ULD9 1512 aaPredicted RBP39.23■■■■□ 3.87
NPHS1-203ENST00000585400 TARBP1Q13395 1621 aaKnown RBP39.19■■■■□ 3.86
NPHS1-203ENST00000585400 SOGA1O94964 1423 aa39.18■■■■□ 3.86
NPHS1-203ENST00000585400 RAD54L2Q9Y4B4 1467 aa39.17■■■■□ 3.86
NPHS1-203ENST00000585400 WRNQ14191 1432 aaPredicted RBP eCLIP39.14■■■■□ 3.86
NPHS1-203ENST00000585400 EIF4G3O43432 1585 aaKnown RBP39.04■■■■□ 3.84
NPHS1-203ENST00000585400 SYNJ1O43426 1573 aa39.04■■■■□ 3.84
NPHS1-203ENST00000585400 AQRO60306 1485 aaKnown RBP eCLIP39.02■■■■□ 3.84
NPHS1-203ENST00000585400 TOP2BQ02880 1626 aa39.02■■■■□ 3.84
NPHS1-203ENST00000585400 BIVM-ERCC5R4GMW8 1640 aa39■■■■□ 3.83
NPHS1-203ENST00000585400 TDRD9Q8NDG6 1382 aaKnown RBP38.97■■■■□ 3.83
NPHS1-203ENST00000585400 OSCARQ8IYS5 282 aa38.92■■■■□ 3.82
NPHS1-203ENST00000585400 WDR97A6NE52 1622 aa38.85■■■■□ 3.81
NPHS1-203ENST00000585400 ABCA10Q8WWZ4 1543 aa38.84■■■■□ 3.81
NPHS1-203ENST00000585400 TRIM41Q8WV44 630 aa38.79■■■■□ 3.8
NPHS1-203ENST00000585400 GAPVD1Q14C86 1478 aa38.72■■■■□ 3.79
NPHS1-203ENST00000585400 GRIN2BQ13224 1484 aa38.71■■■■□ 3.79
NPHS1-203ENST00000585400 ABCA5Q8WWZ7 1642 aa38.67■■■■□ 3.78
NPHS1-203ENST00000585400 SNAPC4Q5SXM2 1469 aa38.66■■■■□ 3.78
NPHS1-203ENST00000585400 FBLN2P98095 1184 aa38.59■■■■□ 3.77
NPHS1-203ENST00000585400 PBRM1Q86U86 1689 aa38.58■■■■□ 3.77
NPHS1-203ENST00000585400 MAGI1Q96QZ7 1491 aaPredicted RBP38.58■■■■□ 3.77
NPHS1-203ENST00000585400 CHD1O14646 1710 aa38.57■■■■□ 3.76
NPHS1-203ENST00000585400 CHMP7Q8WUX9 453 aaPredicted RBP38.46■■■■□ 3.75
NPHS1-203ENST00000585400 RIMBP3CA6NJZ7 1639 aa38.45■■■■□ 3.75
NPHS1-203ENST00000585400 RIMBP3BA6NNM3 1639 aa38.45■■■■□ 3.75
NPHS1-203ENST00000585400 RIMBP3Q9UFD9 1639 aa38.45■■■■□ 3.75
NPHS1-203ENST00000585400 SYNJ2O15056 1496 aa38.44■■■■□ 3.74
NPHS1-203ENST00000585400 ARHGEF11O15085 1522 aa38.37■■■■□ 3.73
NPHS1-203ENST00000585400 ERICH3Q5RHP9 1530 aa38.37■■■■□ 3.73
NPHS1-203ENST00000585400 KIF27Q86VH2 1401 aa38.32■■■■□ 3.73
NPHS1-203ENST00000585400 ADAMTS12P58397 1594 aa38.31■■■■□ 3.72
NPHS1-203ENST00000585400 FHAD1B1AJZ9 1412 aa38.27■■■■□ 3.72
NPHS1-203ENST00000585400 GRIN2AQ12879 1464 aa38.2■■■■□ 3.71
NPHS1-203ENST00000585400 IGF1RP08069 1367 aa38.17■■■■□ 3.7
NPHS1-203ENST00000585400 CLASP1Q7Z460 1538 aa38.12■■■■□ 3.69
NPHS1-203ENST00000585400 CYB5RLQ6IPT4 315 aa38.04■■■■□ 3.68
NPHS1-203ENST00000585400 NUP160Q12769 1436 aa38.03■■■■□ 3.68
NPHS1-203ENST00000585400 CUL7Q14999 1698 aa38.01■■■■□ 3.68
NPHS1-203ENST00000585400 ARAP1Q96P48 1450 aa38.01■■■■□ 3.67
NPHS1-203ENST00000585400 RUSC2Q8N2Y8 1516 aa38.01■■■■□ 3.67
NPHS1-203ENST00000585400 CEP170Q5SW79 1584 aa38■■■■□ 3.67
NPHS1-203ENST00000585400 CARMIL1Q5VZK9 1371 aa37.95■■■■□ 3.67
NPHS1-203ENST00000585400 CHIC1Q5VXU3 224 aa37.85■■■■□ 3.65
NPHS1-203ENST00000585400 RAPGEF2Q9Y4G8 1499 aa37.71■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms