RNA–Protein interactions for RNA: ENST00000585382.5

NFIX-204, Transcript of nuclear factor I X, humanhuman

TSL 5

Gene NFIX, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-204ENST00000585382 NISCHQ9Y2I1 1504 aa30.06■■■□□ 2.4
NFIX-204ENST00000585382 CCDC180Q9P1Z9 1646 aa26.76■■□□□ 1.87
NFIX-204ENST00000585382 ABCC9O60706 1549 aa26.59■■□□□ 1.85
NFIX-204ENST00000585382 RB1CC1Q8TDY2 1594 aa25.35■■□□□ 1.65
NFIX-204ENST00000585382 DNAJC5BQ9UF47 199 aa25.34■■□□□ 1.65
NFIX-204ENST00000585382 DCAF8L2P0C7V8 631 aa25.27■■□□□ 1.64
NFIX-204ENST00000585382 NACADO15069 1562 aa25.26■■□□□ 1.63
NFIX-204ENST00000585382 MYO15BQ96JP2 1530 aa25.01■■□□□ 1.59
NFIX-204ENST00000585382 ZCCHC6Q5VYS8 1495 aaKnown RBP24.99■■□□□ 1.59
NFIX-204ENST00000585382 PABPN1Q86U42 306 aaKnown RBP eCLIP24.84■■□□□ 1.57
NFIX-204ENST00000585382 DCAF1Q9Y4B6 1507 aa24.81■■□□□ 1.56
NFIX-204ENST00000585382 UNC13AQ9UPW8 1703 aa24.77■■□□□ 1.56
NFIX-204ENST00000585382 BICRAQ9NZM4 1560 aa24.67■■□□□ 1.54
NFIX-204ENST00000585382 SCRIBQ14160 1630 aa24.49■■□□□ 1.51
NFIX-204ENST00000585382 SHROOM4Q9ULL8 1493 aa24.29■■□□□ 1.48
NFIX-204ENST00000585382 DNAJC5Q9H3Z4 198 aa24.1■■□□□ 1.45
NFIX-204ENST00000585382 EIF4G1Q04637 1599 aaKnown RBP24.01■■□□□ 1.43
NFIX-204ENST00000585382 CC2D2AQ9P2K1 1620 aa23.99■■□□□ 1.43
NFIX-204ENST00000585382 CECR2Q9BXF3 1484 aa23.89■■□□□ 1.42
NFIX-204ENST00000585382 SMARCA4P51532 1647 aa23.37■■□□□ 1.33
NFIX-204ENST00000585382 NCAPD3P42695 1498 aa23.36■■□□□ 1.33
NFIX-204ENST00000585382 ATAD2BQ9ULI0 1458 aa23.36■■□□□ 1.33
NFIX-204ENST00000585382 BAZ1AQ9NRL2 1556 aaPredicted RBP23.28■■□□□ 1.32
NFIX-204ENST00000585382 SMARCA2P51531 1590 aa23.24■■□□□ 1.31
NFIX-204ENST00000585382 MROH2BQ7Z745 1585 aa23.2■■□□□ 1.3
NFIX-204ENST00000585382 HMGXB3Q12766 1538 aa23.18■■□□□ 1.3
NFIX-204ENST00000585382 PEG3Q9GZU2 1588 aa23.13■■□□□ 1.29
NFIX-204ENST00000585382 BAZ1BQ9UIG0 1483 aaKnown RBP23.11■■□□□ 1.29
NFIX-204ENST00000585382 NESP48681 1621 aa22.94■■□□□ 1.26
NFIX-204ENST00000585382 WIZO95785 1651 aa22.9■■□□□ 1.26
NFIX-204ENST00000585382 ERCC6Q03468 1493 aa22.88■■□□□ 1.25
NFIX-204ENST00000585382 RSF1Q96T23 1441 aaPredicted RBP22.84■■□□□ 1.25
NFIX-204ENST00000585382 CUX2O14529 1486 aa22.79■■□□□ 1.24
NFIX-204ENST00000585382 LAMC3Q9Y6N6 1575 aa22.73■■□□□ 1.23
NFIX-204ENST00000585382 CADPSQ9ULU8 1353 aa22.67■■□□□ 1.22
NFIX-204ENST00000585382 TOP2AP11388 1531 aaKnown RBP22.63■■□□□ 1.21
NFIX-204ENST00000585382 PDS5BQ9NTI5 1447 aa22.62■■□□□ 1.21
NFIX-204ENST00000585382 THOC2Q8NI27 1593 aaKnown RBP22.59■■□□□ 1.21
NFIX-204ENST00000585382 KIF21AQ7Z4S6 1674 aa22.58■■□□□ 1.2
NFIX-204ENST00000585382 CFTRP13569 1480 aa22.47■■□□□ 1.19
NFIX-204ENST00000585382 MRC2Q9UBG0 1479 aa22.42■■□□□ 1.18
NFIX-204ENST00000585382 FANCD2Q9BXW9 1451 aa22.41■■□□□ 1.18
NFIX-204ENST00000585382 CCDC88BA6NC98 1476 aa22.41■■□□□ 1.18
NFIX-204ENST00000585382 CEP164Q9UPV0 1460 aa22.39■■□□□ 1.17
NFIX-204ENST00000585382 WDR62O43379 1518 aa22.35■■□□□ 1.17
NFIX-204ENST00000585382 TRIM41Q8WV44 630 aa22.32■■□□□ 1.16
NFIX-204ENST00000585382 URB2Q14146 1524 aaKnown RBP22.23■■□□□ 1.15
NFIX-204ENST00000585382 PRDM2Q13029 1718 aa22.16■■□□□ 1.14
NFIX-204ENST00000585382 SUPT5HO00267 1087 aaKnown RBP22.07■■□□□ 1.12
NFIX-204ENST00000585382 TOPBP1Q92547 1522 aa22.03■■□□□ 1.12
NFIX-204ENST00000585382 DNMBPQ6XZF7 1577 aa21.94■■□□□ 1.1
NFIX-204ENST00000585382 ABCC8Q09428 1581 aa21.93■■□□□ 1.1
NFIX-204ENST00000585382 IFT140Q96RY7 1462 aa21.93■■□□□ 1.1
NFIX-204ENST00000585382 ZNF608Q9ULD9 1512 aaPredicted RBP21.92■■□□□ 1.1
NFIX-204ENST00000585382 POLA1P09884 1462 aaPredicted RBP21.83■■□□□ 1.08
NFIX-204ENST00000585382 TARBP1Q13395 1621 aaKnown RBP21.79■■□□□ 1.08
NFIX-204ENST00000585382 CUX1P39880 1505 aa21.78■■□□□ 1.08
NFIX-204ENST00000585382 RAD54L2Q9Y4B4 1467 aa21.77■■□□□ 1.08
NFIX-204ENST00000585382 OSCARQ8IYS5 282 aa21.76■■□□□ 1.07
NFIX-204ENST00000585382 AQRO60306 1485 aaKnown RBP eCLIP21.76■■□□□ 1.078e-7■■■■□ 22.8
NFIX-204ENST00000585382 EIF4G3O43432 1585 aaKnown RBP21.75■■□□□ 1.07
NFIX-204ENST00000585382 FGD5Q6ZNL6 1462 aa21.73■■□□□ 1.07
NFIX-204ENST00000585382 SOGA1O94964 1423 aa21.72■■□□□ 1.07
NFIX-204ENST00000585382 TDRD9Q8NDG6 1382 aaKnown RBP21.68■■□□□ 1.06
NFIX-204ENST00000585382 FBLN2P98095 1184 aa21.53■■□□□ 1.04
NFIX-204ENST00000585382 SNAPC4Q5SXM2 1469 aa21.52■■□□□ 1.04
NFIX-204ENST00000585382 WDR97A6NE52 1622 aa21.52■■□□□ 1.04
NFIX-204ENST00000585382 RIMBP3CA6NJZ7 1639 aa21.52■■□□□ 1.04
NFIX-204ENST00000585382 RIMBP3BA6NNM3 1639 aa21.52■■□□□ 1.04
NFIX-204ENST00000585382 RIMBP3Q9UFD9 1639 aa21.52■■□□□ 1.04
NFIX-204ENST00000585382 WRNQ14191 1432 aaPredicted RBP eCLIP21.51■■□□□ 1.03
NFIX-204ENST00000585382 CHD1O14646 1710 aa21.51■■□□□ 1.03
NFIX-204ENST00000585382 GRIN2BQ13224 1484 aa21.49■■□□□ 1.03
NFIX-204ENST00000585382 ABCA10Q8WWZ4 1543 aa21.49■■□□□ 1.03
NFIX-204ENST00000585382 SYNJ1O43426 1573 aa21.48■■□□□ 1.03
NFIX-204ENST00000585382 TOP2BQ02880 1626 aa21.46■■□□□ 1.03
NFIX-204ENST00000585382 GAPVD1Q14C86 1478 aa21.45■■□□□ 1.03
NFIX-204ENST00000585382 BIVM-ERCC5R4GMW8 1640 aa21.44■■□□□ 1.02
NFIX-204ENST00000585382 MAGI1Q96QZ7 1491 aaPredicted RBP21.44■■□□□ 1.02
NFIX-204ENST00000585382 AEBP2Q6ZN18 517 aaPredicted RBP21.43■■□□□ 1.02
NFIX-204ENST00000585382 ARHGEF11O15085 1522 aa21.42■■□□□ 1.02
NFIX-204ENST00000585382 ABCA5Q8WWZ7 1642 aa21.41■■□□□ 1.02
NFIX-204ENST00000585382 CHMP7Q8WUX9 453 aaPredicted RBP21.4■■□□□ 1.02
NFIX-204ENST00000585382 SYNJ2O15056 1496 aa21.38■■□□□ 1.01
NFIX-204ENST00000585382 PBRM1Q86U86 1689 aa21.37■■□□□ 1.01
NFIX-204ENST00000585382 CLASP1Q7Z460 1538 aa21.32■■□□□ 1
NFIX-204ENST00000585382 CYB5RLQ6IPT4 315 aa21.27■■□□□ 1
NFIX-204ENST00000585382 ARAP1Q96P48 1450 aa21.26■□□□□ 0.99
NFIX-204ENST00000585382 ADAMTS12P58397 1594 aa21.24■□□□□ 0.99
NFIX-204ENST00000585382 GRIN2AQ12879 1464 aa21.22■□□□□ 0.99
NFIX-204ENST00000585382 FHAD1B1AJZ9 1412 aa21.2■□□□□ 0.98
NFIX-204ENST00000585382 ERICH3Q5RHP9 1530 aa21.19■□□□□ 0.98
NFIX-204ENST00000585382 TRHP20396 242 aaPredicted RBP21.16■□□□□ 0.98
NFIX-204ENST00000585382 NUP160Q12769 1436 aa21.15■□□□□ 0.98
NFIX-204ENST00000585382 CEP170Q5SW79 1584 aa21.14■□□□□ 0.97
NFIX-204ENST00000585382 IGF1RP08069 1367 aa21.07■□□□□ 0.96
NFIX-204ENST00000585382 KIF27Q86VH2 1401 aa21.06■□□□□ 0.96
NFIX-204ENST00000585382 ERCC6L2Q5T890 1561 aa21.06■□□□□ 0.96
NFIX-204ENST00000585382 SHROOM2Q13796 1616 aa20.98■□□□□ 0.95
NFIX-204ENST00000585382 JPH4Q96JJ6 628 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms