RNA–Protein interactions for RNA: ENST00000585371.1

CHAF1A-202, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-202ENST00000585371 NISCHQ9Y2I1 1504 aa32.12■■■□□ 2.73
CHAF1A-202ENST00000585371 CCDC180Q9P1Z9 1646 aa28.47■■■□□ 2.15
CHAF1A-202ENST00000585371 ABCC9O60706 1549 aa28.28■■■□□ 2.12
CHAF1A-202ENST00000585371 RB1CC1Q8TDY2 1594 aa26.98■■□□□ 1.91
CHAF1A-202ENST00000585371 ZCCHC6Q5VYS8 1495 aaKnown RBP26.83■■□□□ 1.89
CHAF1A-202ENST00000585371 NACADO15069 1562 aa26.79■■□□□ 1.88
CHAF1A-202ENST00000585371 MYO15BQ96JP2 1530 aa26.61■■□□□ 1.85
CHAF1A-202ENST00000585371 DCAF1Q9Y4B6 1507 aa26.6■■□□□ 1.85
CHAF1A-202ENST00000585371 DCAF8L2P0C7V8 631 aa26.54■■□□□ 1.84
CHAF1A-202ENST00000585371 DNAJC5BQ9UF47 199 aa26.52■■□□□ 1.84
CHAF1A-202ENST00000585371 UNC13AQ9UPW8 1703 aa26.36■■□□□ 1.81
CHAF1A-202ENST00000585371 PABPN1Q86U42 306 aaKnown RBP eCLIP26.28■■□□□ 1.8
CHAF1A-202ENST00000585371 BICRAQ9NZM4 1560 aa26.15■■□□□ 1.78
CHAF1A-202ENST00000585371 SCRIBQ14160 1630 aa25.96■■□□□ 1.75
CHAF1A-202ENST00000585371 SHROOM4Q9ULL8 1493 aa25.88■■□□□ 1.73
CHAF1A-202ENST00000585371 CC2D2AQ9P2K1 1620 aa25.59■■□□□ 1.69
CHAF1A-202ENST00000585371 EIF4G1Q04637 1599 aaKnown RBP25.52■■□□□ 1.68
CHAF1A-202ENST00000585371 CECR2Q9BXF3 1484 aa25.51■■□□□ 1.67
CHAF1A-202ENST00000585371 SMARCA4P51532 1647 aa24.89■■□□□ 1.57
CHAF1A-202ENST00000585371 BAZ1AQ9NRL2 1556 aaPredicted RBP24.84■■□□□ 1.57
CHAF1A-202ENST00000585371 MROH2BQ7Z745 1585 aa24.78■■□□□ 1.56
CHAF1A-202ENST00000585371 NCAPD3P42695 1498 aa24.7■■□□□ 1.54
CHAF1A-202ENST00000585371 PEG3Q9GZU2 1588 aa24.66■■□□□ 1.54
CHAF1A-202ENST00000585371 ATAD2BQ9ULI0 1458 aa24.64■■□□□ 1.54
CHAF1A-202ENST00000585371 SMARCA2P51531 1590 aa24.6■■□□□ 1.53
CHAF1A-202ENST00000585371 RSF1Q96T23 1441 aaPredicted RBP24.57■■□□□ 1.52
CHAF1A-202ENST00000585371 WIZO95785 1651 aa24.55■■□□□ 1.52
CHAF1A-202ENST00000585371 HMGXB3Q12766 1538 aa24.54■■□□□ 1.52
CHAF1A-202ENST00000585371 CUX2O14529 1486 aa24.48■■□□□ 1.51
CHAF1A-202ENST00000585371 DNAJC5Q9H3Z4 198 aa24.47■■□□□ 1.51
CHAF1A-202ENST00000585371 ERCC6Q03468 1493 aa24.46■■□□□ 1.51
CHAF1A-202ENST00000585371 BAZ1BQ9UIG0 1483 aaKnown RBP24.41■■□□□ 1.5
CHAF1A-202ENST00000585371 NESP48681 1621 aa24.27■■□□□ 1.48
CHAF1A-202ENST00000585371 TOP2AP11388 1531 aaKnown RBP24.26■■□□□ 1.47
CHAF1A-202ENST00000585371 LAMC3Q9Y6N6 1575 aa24.18■■□□□ 1.46
CHAF1A-202ENST00000585371 THOC2Q8NI27 1593 aaKnown RBP24.09■■□□□ 1.45
CHAF1A-202ENST00000585371 SUPT5HO00267 1087 aaKnown RBP24.05■■□□□ 1.44
CHAF1A-202ENST00000585371 PDS5BQ9NTI5 1447 aa24.02■■□□□ 1.44
CHAF1A-202ENST00000585371 KIF21AQ7Z4S6 1674 aa24.02■■□□□ 1.44
CHAF1A-202ENST00000585371 CCDC88BA6NC98 1476 aa23.97■■□□□ 1.43
CHAF1A-202ENST00000585371 CADPSQ9ULU8 1353 aa23.92■■□□□ 1.42
CHAF1A-202ENST00000585371 MRC2Q9UBG0 1479 aa23.81■■□□□ 1.4
CHAF1A-202ENST00000585371 CFTRP13569 1480 aa23.8■■□□□ 1.4
CHAF1A-202ENST00000585371 WDR62O43379 1518 aa23.76■■□□□ 1.39
CHAF1A-202ENST00000585371 PRDM2Q13029 1718 aa23.74■■□□□ 1.39
CHAF1A-202ENST00000585371 CEP164Q9UPV0 1460 aa23.71■■□□□ 1.39
CHAF1A-202ENST00000585371 FANCD2Q9BXW9 1451 aa23.66■■□□□ 1.38
CHAF1A-202ENST00000585371 URB2Q14146 1524 aaKnown RBP23.45■■□□□ 1.34
CHAF1A-202ENST00000585371 TRIM41Q8WV44 630 aa23.34■■□□□ 1.33
CHAF1A-202ENST00000585371 OSCARQ8IYS5 282 aa23.3■■□□□ 1.32
CHAF1A-202ENST00000585371 TOPBP1Q92547 1522 aa23.27■■□□□ 1.32
CHAF1A-202ENST00000585371 DNMBPQ6XZF7 1577 aa23.27■■□□□ 1.32
CHAF1A-202ENST00000585371 IFT140Q96RY7 1462 aa23.24■■□□□ 1.31
CHAF1A-202ENST00000585371 ABCC8Q09428 1581 aa23.23■■□□□ 1.31
CHAF1A-202ENST00000585371 CUX1P39880 1505 aa23.22■■□□□ 1.31
CHAF1A-202ENST00000585371 ZNF608Q9ULD9 1512 aaPredicted RBP23.14■■□□□ 1.3
CHAF1A-202ENST00000585371 BIVM-ERCC5R4GMW8 1640 aa23.13■■□□□ 1.29
CHAF1A-202ENST00000585371 SYNJ1O43426 1573 aa23.12■■□□□ 1.29
CHAF1A-202ENST00000585371 WRNQ14191 1432 aaPredicted RBP eCLIP23.12■■□□□ 1.29
CHAF1A-202ENST00000585371 TOP2BQ02880 1626 aa23.1■■□□□ 1.29
CHAF1A-202ENST00000585371 POLA1P09884 1462 aaPredicted RBP23.09■■□□□ 1.29
CHAF1A-202ENST00000585371 EIF4G3O43432 1585 aaKnown RBP23.07■■□□□ 1.28
CHAF1A-202ENST00000585371 FGD5Q6ZNL6 1462 aa23.06■■□□□ 1.28
CHAF1A-202ENST00000585371 TARBP1Q13395 1621 aaKnown RBP23.04■■□□□ 1.28
CHAF1A-202ENST00000585371 RIMBP3CA6NJZ7 1639 aa23.02■■□□□ 1.28
CHAF1A-202ENST00000585371 RIMBP3BA6NNM3 1639 aa23.02■■□□□ 1.28
CHAF1A-202ENST00000585371 RIMBP3Q9UFD9 1639 aa23.02■■□□□ 1.28
CHAF1A-202ENST00000585371 RAD54L2Q9Y4B4 1467 aa22.98■■□□□ 1.27
CHAF1A-202ENST00000585371 SOGA1O94964 1423 aa22.96■■□□□ 1.27
CHAF1A-202ENST00000585371 WDR97A6NE52 1622 aa22.96■■□□□ 1.27
CHAF1A-202ENST00000585371 ARHGEF11O15085 1522 aa22.93■■□□□ 1.26
CHAF1A-202ENST00000585371 AQRO60306 1485 aaKnown RBP eCLIP22.93■■□□□ 1.267e-7■■■■□ 26.3
CHAF1A-202ENST00000585371 CHD1O14646 1710 aa22.92■■□□□ 1.26
CHAF1A-202ENST00000585371 ABCA10Q8WWZ4 1543 aa22.87■■□□□ 1.25
CHAF1A-202ENST00000585371 ABCA5Q8WWZ7 1642 aa22.79■■□□□ 1.24
CHAF1A-202ENST00000585371 TDRD9Q8NDG6 1382 aaKnown RBP22.79■■□□□ 1.24
CHAF1A-202ENST00000585371 FBLN2P98095 1184 aa22.78■■□□□ 1.24
CHAF1A-202ENST00000585371 CYB5RLQ6IPT4 315 aa22.73■■□□□ 1.23
CHAF1A-202ENST00000585371 SNAPC4Q5SXM2 1469 aa22.73■■□□□ 1.23
CHAF1A-202ENST00000585371 PBRM1Q86U86 1689 aa22.72■■□□□ 1.23
CHAF1A-202ENST00000585371 MAGI1Q96QZ7 1491 aaPredicted RBP22.71■■□□□ 1.23
CHAF1A-202ENST00000585371 GAPVD1Q14C86 1478 aa22.7■■□□□ 1.22
CHAF1A-202ENST00000585371 ARAP1Q96P48 1450 aa22.69■■□□□ 1.22
CHAF1A-202ENST00000585371 CHIC1Q5VXU3 224 aa22.69■■□□□ 1.22
CHAF1A-202ENST00000585371 GRIN2BQ13224 1484 aa22.68■■□□□ 1.22
CHAF1A-202ENST00000585371 CLASP1Q7Z460 1538 aa22.65■■□□□ 1.22
CHAF1A-202ENST00000585371 CHMP7Q8WUX9 453 aaPredicted RBP22.64■■□□□ 1.21
CHAF1A-202ENST00000585371 SYNJ2O15056 1496 aa22.61■■□□□ 1.21
CHAF1A-202ENST00000585371 ERICH3Q5RHP9 1530 aa22.59■■□□□ 1.21
CHAF1A-202ENST00000585371 KIF27Q86VH2 1401 aa22.58■■□□□ 1.21
CHAF1A-202ENST00000585371 RUSC2Q8N2Y8 1516 aa22.57■■□□□ 1.2
CHAF1A-202ENST00000585371 ADAMTS12P58397 1594 aa22.53■■□□□ 1.2
CHAF1A-202ENST00000585371 TRHP20396 242 aaPredicted RBP22.51■■□□□ 1.19
CHAF1A-202ENST00000585371 IGF1RP08069 1367 aa22.5■■□□□ 1.19
CHAF1A-202ENST00000585371 CUL7Q14999 1698 aa22.46■■□□□ 1.19
CHAF1A-202ENST00000585371 FHAD1B1AJZ9 1412 aa22.45■■□□□ 1.18
CHAF1A-202ENST00000585371 GRIN2AQ12879 1464 aa22.39■■□□□ 1.17
CHAF1A-202ENST00000585371 CARMIL1Q5VZK9 1371 aa22.35■■□□□ 1.17
CHAF1A-202ENST00000585371 EEA1Q15075 1411 aa22.34■■□□□ 1.17
CHAF1A-202ENST00000585371 CEP170Q5SW79 1584 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms