RNA–Protein interactions for RNA: ENST00000585343.5

RAD51D-206, Transcript of RAD51 paralog D, humanhuman

TSL 1 (best)

Gene RAD51D, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51D-206ENST00000585343 NISCHQ9Y2I1 1504 aa33.6■■■□□ 2.97
RAD51D-206ENST00000585343 CCDC180Q9P1Z9 1646 aa30.04■■■□□ 2.4
RAD51D-206ENST00000585343 ABCC9O60706 1549 aa29.29■■■□□ 2.28
RAD51D-206ENST00000585343 RB1CC1Q8TDY2 1594 aa28.28■■■□□ 2.12
RAD51D-206ENST00000585343 NACADO15069 1562 aa28.22■■■□□ 2.11
RAD51D-206ENST00000585343 MYO15BQ96JP2 1530 aa28.07■■■□□ 2.08
RAD51D-206ENST00000585343 ZCCHC6Q5VYS8 1495 aaKnown RBP28.01■■■□□ 2.07
RAD51D-206ENST00000585343 DCAF8L2P0C7V8 631 aa27.97■■■□□ 2.07
RAD51D-206ENST00000585343 DCAF1Q9Y4B6 1507 aa27.88■■■□□ 2.05
RAD51D-206ENST00000585343 UNC13AQ9UPW8 1703 aa27.57■■■□□ 2
RAD51D-206ENST00000585343 BICRAQ9NZM4 1560 aa27.31■■□□□ 1.96
RAD51D-206ENST00000585343 SCRIBQ14160 1630 aa27.29■■□□□ 1.96
RAD51D-206ENST00000585343 PABPN1Q86U42 306 aaKnown RBP eCLIP27.27■■□□□ 1.96
RAD51D-206ENST00000585343 SHROOM4Q9ULL8 1493 aa27.24■■□□□ 1.95
RAD51D-206ENST00000585343 DNAJC5BQ9UF47 199 aa26.8■■□□□ 1.88
RAD51D-206ENST00000585343 EIF4G1Q04637 1599 aaKnown RBP26.66■■□□□ 1.86
RAD51D-206ENST00000585343 CC2D2AQ9P2K1 1620 aa26.54■■□□□ 1.84
RAD51D-206ENST00000585343 CECR2Q9BXF3 1484 aa26.38■■□□□ 1.81
RAD51D-206ENST00000585343 SMARCA4P51532 1647 aa26.13■■□□□ 1.77
RAD51D-206ENST00000585343 BAZ1AQ9NRL2 1556 aaPredicted RBP26.12■■□□□ 1.77
RAD51D-206ENST00000585343 SMARCA2P51531 1590 aa26.03■■□□□ 1.76
RAD51D-206ENST00000585343 NCAPD3P42695 1498 aa25.98■■□□□ 1.75
RAD51D-206ENST00000585343 ATAD2BQ9ULI0 1458 aa25.96■■□□□ 1.75
RAD51D-206ENST00000585343 HMGXB3Q12766 1538 aa25.93■■□□□ 1.74
RAD51D-206ENST00000585343 PEG3Q9GZU2 1588 aa25.9■■□□□ 1.74
RAD51D-206ENST00000585343 MROH2BQ7Z745 1585 aa25.84■■□□□ 1.73
RAD51D-206ENST00000585343 BAZ1BQ9UIG0 1483 aaKnown RBP25.79■■□□□ 1.72
RAD51D-206ENST00000585343 WIZO95785 1651 aa25.57■■□□□ 1.68
RAD51D-206ENST00000585343 RSF1Q96T23 1441 aaPredicted RBP25.52■■□□□ 1.68
RAD51D-206ENST00000585343 TOP2AP11388 1531 aaKnown RBP25.38■■□□□ 1.65
RAD51D-206ENST00000585343 LAMC3Q9Y6N6 1575 aa25.38■■□□□ 1.65
RAD51D-206ENST00000585343 ERCC6Q03468 1493 aa25.36■■□□□ 1.65
RAD51D-206ENST00000585343 NESP48681 1621 aa25.29■■□□□ 1.64
RAD51D-206ENST00000585343 CADPSQ9ULU8 1353 aa25.2■■□□□ 1.63
RAD51D-206ENST00000585343 PDS5BQ9NTI5 1447 aa25.19■■□□□ 1.62
RAD51D-206ENST00000585343 CUX2O14529 1486 aa25.15■■□□□ 1.62
RAD51D-206ENST00000585343 KIF21AQ7Z4S6 1674 aa25.09■■□□□ 1.61
RAD51D-206ENST00000585343 CFTRP13569 1480 aa25.05■■□□□ 1.6
RAD51D-206ENST00000585343 THOC2Q8NI27 1593 aaKnown RBP25.05■■□□□ 1.6
RAD51D-206ENST00000585343 CCDC88BA6NC98 1476 aa24.98■■□□□ 1.59
RAD51D-206ENST00000585343 PRDM2Q13029 1718 aa24.98■■□□□ 1.59
RAD51D-206ENST00000585343 CEP164Q9UPV0 1460 aa24.96■■□□□ 1.59
RAD51D-206ENST00000585343 FANCD2Q9BXW9 1451 aa24.93■■□□□ 1.58
RAD51D-206ENST00000585343 MRC2Q9UBG0 1479 aa24.92■■□□□ 1.58
RAD51D-206ENST00000585343 WDR62O43379 1518 aa24.86■■□□□ 1.57
RAD51D-206ENST00000585343 SUPT5HO00267 1087 aaKnown RBP24.73■■□□□ 1.55
RAD51D-206ENST00000585343 URB2Q14146 1524 aaKnown RBP24.66■■□□□ 1.54
RAD51D-206ENST00000585343 ABCC8Q09428 1581 aa24.6■■□□□ 1.53
RAD51D-206ENST00000585343 DNMBPQ6XZF7 1577 aa24.54■■□□□ 1.52
RAD51D-206ENST00000585343 TOPBP1Q92547 1522 aa24.52■■□□□ 1.52
RAD51D-206ENST00000585343 IFT140Q96RY7 1462 aa24.44■■□□□ 1.5
RAD51D-206ENST00000585343 DNAJC5Q9H3Z4 198 aa24.33■■□□□ 1.49
RAD51D-206ENST00000585343 POLA1P09884 1462 aaPredicted RBP24.3■■□□□ 1.48
RAD51D-206ENST00000585343 CUX1P39880 1505 aa24.27■■□□□ 1.48
RAD51D-206ENST00000585343 TARBP1Q13395 1621 aaKnown RBP24.25■■□□□ 1.47
RAD51D-206ENST00000585343 FGD5Q6ZNL6 1462 aa24.23■■□□□ 1.47
RAD51D-206ENST00000585343 EIF4G3O43432 1585 aaKnown RBP24.22■■□□□ 1.47
RAD51D-206ENST00000585343 WDR97A6NE52 1622 aa24.21■■□□□ 1.47
RAD51D-206ENST00000585343 ZNF608Q9ULD9 1512 aaPredicted RBP24.21■■□□□ 1.47
RAD51D-206ENST00000585343 SOGA1O94964 1423 aa24.18■■□□□ 1.46
RAD51D-206ENST00000585343 RAD54L2Q9Y4B4 1467 aa24.13■■□□□ 1.45
RAD51D-206ENST00000585343 WRNQ14191 1432 aaPredicted RBP eCLIP24.12■■□□□ 1.45
RAD51D-206ENST00000585343 BIVM-ERCC5R4GMW8 1640 aa24.12■■□□□ 1.45
RAD51D-206ENST00000585343 TOP2BQ02880 1626 aa24.1■■□□□ 1.45
RAD51D-206ENST00000585343 AQRO60306 1485 aaKnown RBP eCLIP24.06■■□□□ 1.44
RAD51D-206ENST00000585343 SYNJ1O43426 1573 aa24.03■■□□□ 1.44
RAD51D-206ENST00000585343 ABCA10Q8WWZ4 1543 aa24.03■■□□□ 1.44
RAD51D-206ENST00000585343 TDRD9Q8NDG6 1382 aaKnown RBP24■■□□□ 1.43
RAD51D-206ENST00000585343 OSCARQ8IYS5 282 aa23.99■■□□□ 1.43
RAD51D-206ENST00000585343 GRIN2BQ13224 1484 aa23.97■■□□□ 1.43
RAD51D-206ENST00000585343 MAGI1Q96QZ7 1491 aaPredicted RBP23.95■■□□□ 1.42
RAD51D-206ENST00000585343 ABCA5Q8WWZ7 1642 aa23.95■■□□□ 1.42
RAD51D-206ENST00000585343 PBRM1Q86U86 1689 aa23.94■■□□□ 1.42
RAD51D-206ENST00000585343 GAPVD1Q14C86 1478 aa23.93■■□□□ 1.42
RAD51D-206ENST00000585343 CHD1O14646 1710 aa23.93■■□□□ 1.42
RAD51D-206ENST00000585343 SNAPC4Q5SXM2 1469 aa23.92■■□□□ 1.42
RAD51D-206ENST00000585343 SYNJ2O15056 1496 aa23.82■■□□□ 1.4
RAD51D-206ENST00000585343 FBLN2P98095 1184 aa23.79■■□□□ 1.4
RAD51D-206ENST00000585343 CHMP7Q8WUX9 453 aaPredicted RBP23.77■■□□□ 1.4
RAD51D-206ENST00000585343 ERICH3Q5RHP9 1530 aa23.77■■□□□ 1.4
RAD51D-206ENST00000585343 ADAMTS12P58397 1594 aa23.74■■□□□ 1.39
RAD51D-206ENST00000585343 FHAD1B1AJZ9 1412 aa23.67■■□□□ 1.38
RAD51D-206ENST00000585343 KIF27Q86VH2 1401 aa23.66■■□□□ 1.38
RAD51D-206ENST00000585343 RIMBP3CA6NJZ7 1639 aa23.66■■□□□ 1.38
RAD51D-206ENST00000585343 RIMBP3BA6NNM3 1639 aa23.66■■□□□ 1.38
RAD51D-206ENST00000585343 RIMBP3Q9UFD9 1639 aa23.66■■□□□ 1.38
RAD51D-206ENST00000585343 CLASP1Q7Z460 1538 aa23.65■■□□□ 1.38
RAD51D-206ENST00000585343 ARHGEF11O15085 1522 aa23.64■■□□□ 1.38
RAD51D-206ENST00000585343 GRIN2AQ12879 1464 aa23.64■■□□□ 1.38
RAD51D-206ENST00000585343 CUL7Q14999 1698 aa23.57■■□□□ 1.36
RAD51D-206ENST00000585343 NUP160Q12769 1436 aa23.54■■□□□ 1.36
RAD51D-206ENST00000585343 CEP170Q5SW79 1584 aa23.5■■□□□ 1.35
RAD51D-206ENST00000585343 TRIM41Q8WV44 630 aa23.47■■□□□ 1.35
RAD51D-206ENST00000585343 IGF1RP08069 1367 aa23.46■■□□□ 1.35
RAD51D-206ENST00000585343 ARAP1Q96P48 1450 aa23.43■■□□□ 1.34
RAD51D-206ENST00000585343 SHROOM2Q13796 1616 aa23.4■■□□□ 1.34
RAD51D-206ENST00000585343 RUSC2Q8N2Y8 1516 aa23.39■■□□□ 1.34
RAD51D-206ENST00000585343 CARMIL1Q5VZK9 1371 aa23.37■■□□□ 1.33
RAD51D-206ENST00000585343 CYB5RLQ6IPT4 315 aa23.32■■□□□ 1.32
RAD51D-206ENST00000585343 KIAA0586Q9BVV6 1533 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms