RNA–Protein interactions for RNA: ENST00000585323.5

NEDD4L-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 381 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-210ENST00000585323 NISCHQ9Y2I1 1504 aa30.4■■■□□ 2.46
NEDD4L-210ENST00000585323 CCDC180Q9P1Z9 1646 aa27.07■■□□□ 1.92
NEDD4L-210ENST00000585323 ABCC9O60706 1549 aa26.46■■□□□ 1.83
NEDD4L-210ENST00000585323 RB1CC1Q8TDY2 1594 aa25.46■■□□□ 1.67
NEDD4L-210ENST00000585323 NACADO15069 1562 aa25.43■■□□□ 1.66
NEDD4L-210ENST00000585323 ZCCHC6Q5VYS8 1495 aaKnown RBP25.34■■□□□ 1.65
NEDD4L-210ENST00000585323 MYO15BQ96JP2 1530 aa25.29■■□□□ 1.64
NEDD4L-210ENST00000585323 DCAF8L2P0C7V8 631 aa25.28■■□□□ 1.64
NEDD4L-210ENST00000585323 DCAF1Q9Y4B6 1507 aa25.17■■□□□ 1.62
NEDD4L-210ENST00000585323 UNC13AQ9UPW8 1703 aa24.88■■□□□ 1.57
NEDD4L-210ENST00000585323 BICRAQ9NZM4 1560 aa24.71■■□□□ 1.55
NEDD4L-210ENST00000585323 PABPN1Q86U42 306 aaKnown RBP eCLIP24.68■■□□□ 1.54
NEDD4L-210ENST00000585323 SCRIBQ14160 1630 aa24.67■■□□□ 1.54
NEDD4L-210ENST00000585323 SHROOM4Q9ULL8 1493 aa24.47■■□□□ 1.51
NEDD4L-210ENST00000585323 DNAJC5BQ9UF47 199 aa24.29■■□□□ 1.48
NEDD4L-210ENST00000585323 EIF4G1Q04637 1599 aaKnown RBP24.05■■□□□ 1.44
NEDD4L-210ENST00000585323 CC2D2AQ9P2K1 1620 aa23.95■■□□□ 1.42
NEDD4L-210ENST00000585323 CECR2Q9BXF3 1484 aa23.78■■□□□ 1.4
NEDD4L-210ENST00000585323 SMARCA4P51532 1647 aa23.6■■□□□ 1.37
NEDD4L-210ENST00000585323 BAZ1AQ9NRL2 1556 aaPredicted RBP23.57■■□□□ 1.36
NEDD4L-210ENST00000585323 ATAD2BQ9ULI0 1458 aa23.47■■□□□ 1.35
NEDD4L-210ENST00000585323 NCAPD3P42695 1498 aa23.46■■□□□ 1.35
NEDD4L-210ENST00000585323 SMARCA2P51531 1590 aa23.44■■□□□ 1.34
NEDD4L-210ENST00000585323 MROH2BQ7Z745 1585 aa23.43■■□□□ 1.34
NEDD4L-210ENST00000585323 PEG3Q9GZU2 1588 aa23.4■■□□□ 1.34
NEDD4L-210ENST00000585323 HMGXB3Q12766 1538 aa23.37■■□□□ 1.33
NEDD4L-210ENST00000585323 BAZ1BQ9UIG0 1483 aaKnown RBP23.26■■□□□ 1.31
NEDD4L-210ENST00000585323 WIZO95785 1651 aa23.16■■□□□ 1.3
NEDD4L-210ENST00000585323 RSF1Q96T23 1441 aaPredicted RBP23.14■■□□□ 1.29
NEDD4L-210ENST00000585323 TOP2AP11388 1531 aaKnown RBP22.95■■□□□ 1.26
NEDD4L-210ENST00000585323 NESP48681 1621 aa22.9■■□□□ 1.26
NEDD4L-210ENST00000585323 LAMC3Q9Y6N6 1575 aa22.85■■□□□ 1.25
NEDD4L-210ENST00000585323 ERCC6Q03468 1493 aa22.79■■□□□ 1.24
NEDD4L-210ENST00000585323 CADPSQ9ULU8 1353 aa22.76■■□□□ 1.23
NEDD4L-210ENST00000585323 PDS5BQ9NTI5 1447 aa22.66■■□□□ 1.22
NEDD4L-210ENST00000585323 CCDC88BA6NC98 1476 aa22.65■■□□□ 1.22
NEDD4L-210ENST00000585323 CFTRP13569 1480 aa22.64■■□□□ 1.21
NEDD4L-210ENST00000585323 KIF21AQ7Z4S6 1674 aa22.64■■□□□ 1.21
NEDD4L-210ENST00000585323 THOC2Q8NI27 1593 aaKnown RBP22.6■■□□□ 1.21
NEDD4L-210ENST00000585323 CUX2O14529 1486 aa22.6■■□□□ 1.21
NEDD4L-210ENST00000585323 FANCD2Q9BXW9 1451 aa22.51■■□□□ 1.19
NEDD4L-210ENST00000585323 CEP164Q9UPV0 1460 aa22.49■■□□□ 1.19
NEDD4L-210ENST00000585323 PRDM2Q13029 1718 aa22.47■■□□□ 1.19
NEDD4L-210ENST00000585323 MRC2Q9UBG0 1479 aa22.47■■□□□ 1.19
NEDD4L-210ENST00000585323 SUPT5HO00267 1087 aaKnown RBP22.45■■□□□ 1.18
NEDD4L-210ENST00000585323 WDR62O43379 1518 aa22.41■■□□□ 1.18
NEDD4L-210ENST00000585323 URB2Q14146 1524 aaKnown RBP22.31■■□□□ 1.16
NEDD4L-210ENST00000585323 TOPBP1Q92547 1522 aa22.16■■□□□ 1.14
NEDD4L-210ENST00000585323 ABCC8Q09428 1581 aa22.13■■□□□ 1.13
NEDD4L-210ENST00000585323 DNMBPQ6XZF7 1577 aa22.13■■□□□ 1.13
NEDD4L-210ENST00000585323 IFT140Q96RY7 1462 aa22.02■■□□□ 1.12
NEDD4L-210ENST00000585323 CUX1P39880 1505 aa21.98■■□□□ 1.11
NEDD4L-210ENST00000585323 POLA1P09884 1462 aaPredicted RBP21.97■■□□□ 1.11
NEDD4L-210ENST00000585323 TARBP1Q13395 1621 aaKnown RBP21.93■■□□□ 1.1
NEDD4L-210ENST00000585323 ZNF608Q9ULD9 1512 aaPredicted RBP21.92■■□□□ 1.1
NEDD4L-210ENST00000585323 FGD5Q6ZNL6 1462 aa21.91■■□□□ 1.1
NEDD4L-210ENST00000585323 DNAJC5Q9H3Z4 198 aa21.88■■□□□ 1.09
NEDD4L-210ENST00000585323 EIF4G3O43432 1585 aaKnown RBP21.87■■□□□ 1.09
NEDD4L-210ENST00000585323 RAD54L2Q9Y4B4 1467 aa21.85■■□□□ 1.09
NEDD4L-210ENST00000585323 SOGA1O94964 1423 aa21.84■■□□□ 1.09
NEDD4L-210ENST00000585323 WRNQ14191 1432 aaPredicted RBP eCLIP21.81■■□□□ 1.08
NEDD4L-210ENST00000585323 BIVM-ERCC5R4GMW8 1640 aa21.8■■□□□ 1.08
NEDD4L-210ENST00000585323 SYNJ1O43426 1573 aa21.79■■□□□ 1.08
NEDD4L-210ENST00000585323 TOP2BQ02880 1626 aa21.79■■□□□ 1.08
NEDD4L-210ENST00000585323 AQRO60306 1485 aaKnown RBP eCLIP21.77■■□□□ 1.083e-6■■■□□ 15.8
NEDD4L-210ENST00000585323 WDR97A6NE52 1622 aa21.77■■□□□ 1.07
NEDD4L-210ENST00000585323 TDRD9Q8NDG6 1382 aaKnown RBP21.72■■□□□ 1.07
NEDD4L-210ENST00000585323 ABCA10Q8WWZ4 1543 aa21.7■■□□□ 1.07
NEDD4L-210ENST00000585323 ABCA5Q8WWZ7 1642 aa21.65■■□□□ 1.06
NEDD4L-210ENST00000585323 GRIN2BQ13224 1484 aa21.62■■□□□ 1.05
NEDD4L-210ENST00000585323 GAPVD1Q14C86 1478 aa21.6■■□□□ 1.05
NEDD4L-210ENST00000585323 SNAPC4Q5SXM2 1469 aa21.59■■□□□ 1.05
NEDD4L-210ENST00000585323 OSCARQ8IYS5 282 aa21.58■■□□□ 1.05
NEDD4L-210ENST00000585323 PBRM1Q86U86 1689 aa21.58■■□□□ 1.05
NEDD4L-210ENST00000585323 MAGI1Q96QZ7 1491 aaPredicted RBP21.57■■□□□ 1.04
NEDD4L-210ENST00000585323 CHD1O14646 1710 aa21.56■■□□□ 1.04
NEDD4L-210ENST00000585323 SYNJ2O15056 1496 aa21.48■■□□□ 1.03
NEDD4L-210ENST00000585323 FBLN2P98095 1184 aa21.46■■□□□ 1.03
NEDD4L-210ENST00000585323 ERICH3Q5RHP9 1530 aa21.44■■□□□ 1.02
NEDD4L-210ENST00000585323 ADAMTS12P58397 1594 aa21.43■■□□□ 1.02
NEDD4L-210ENST00000585323 CHMP7Q8WUX9 453 aaPredicted RBP21.41■■□□□ 1.02
NEDD4L-210ENST00000585323 CLASP1Q7Z460 1538 aa21.36■■□□□ 1.01
NEDD4L-210ENST00000585323 FHAD1B1AJZ9 1412 aa21.36■■□□□ 1.01
NEDD4L-210ENST00000585323 GRIN2AQ12879 1464 aa21.35■■□□□ 1.01
NEDD4L-210ENST00000585323 KIF27Q86VH2 1401 aa21.35■■□□□ 1.01
NEDD4L-210ENST00000585323 ARHGEF11O15085 1522 aa21.31■■□□□ 1
NEDD4L-210ENST00000585323 RIMBP3CA6NJZ7 1639 aa21.31■■□□□ 1
NEDD4L-210ENST00000585323 RIMBP3BA6NNM3 1639 aa21.31■■□□□ 1
NEDD4L-210ENST00000585323 RIMBP3Q9UFD9 1639 aa21.31■■□□□ 1
NEDD4L-210ENST00000585323 NUP160Q12769 1436 aa21.26■□□□□ 0.99
NEDD4L-210ENST00000585323 CEP170Q5SW79 1584 aa21.26■□□□□ 0.99
NEDD4L-210ENST00000585323 IGF1RP08069 1367 aa21.25■□□□□ 0.99
NEDD4L-210ENST00000585323 CUL7Q14999 1698 aa21.24■□□□□ 0.99
NEDD4L-210ENST00000585323 TRIM41Q8WV44 630 aa21.21■□□□□ 0.99
NEDD4L-210ENST00000585323 RUSC2Q8N2Y8 1516 aa21.16■□□□□ 0.98
NEDD4L-210ENST00000585323 ARAP1Q96P48 1450 aa21.14■□□□□ 0.98
NEDD4L-210ENST00000585323 CARMIL1Q5VZK9 1371 aa21.12■□□□□ 0.97
NEDD4L-210ENST00000585323 SHROOM2Q13796 1616 aa21.12■□□□□ 0.97
NEDD4L-210ENST00000585323 ERCC6L2Q5T890 1561 aa21.06■□□□□ 0.96
NEDD4L-210ENST00000585323 CYB5RLQ6IPT4 315 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms