RNA–Protein interactions for RNA: ENST00000585204.2

RN7SL411P-201, Transcript of RNA, 7SL, cytoplasmic 411, pseudogene, humanhuman

BASIC

Gene RN7SL411P, Length 300 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL411P-201ENST00000585204 NISCHQ9Y2I1 1504 aa25.2■■□□□ 1.62
RN7SL411P-201ENST00000585204 CCDC180Q9P1Z9 1646 aa22.5■■□□□ 1.19
RN7SL411P-201ENST00000585204 ABCC9O60706 1549 aa22.1■■□□□ 1.13
RN7SL411P-201ENST00000585204 RB1CC1Q8TDY2 1594 aa21.15■□□□□ 0.98
RN7SL411P-201ENST00000585204 NACADO15069 1562 aa21.1■□□□□ 0.97
RN7SL411P-201ENST00000585204 UNC13AQ9UPW8 1703 aa21.01■□□□□ 0.95
RN7SL411P-201ENST00000585204 ZCCHC6Q5VYS8 1495 aaKnown RBP20.96■□□□□ 0.95
RN7SL411P-201ENST00000585204 DCAF8L2P0C7V8 631 aa20.96■□□□□ 0.95
RN7SL411P-201ENST00000585204 MYO15BQ96JP2 1530 aa20.91■□□□□ 0.94
RN7SL411P-201ENST00000585204 DCAF1Q9Y4B6 1507 aa20.8■□□□□ 0.92
RN7SL411P-201ENST00000585204 BICRAQ9NZM4 1560 aa20.7■□□□□ 0.9
RN7SL411P-201ENST00000585204 PABPN1Q86U42 306 aaKnown RBP eCLIP20.6■□□□□ 0.89
RN7SL411P-201ENST00000585204 SCRIBQ14160 1630 aa20.53■□□□□ 0.88
RN7SL411P-201ENST00000585204 DNAJC5BQ9UF47 199 aa20.5■□□□□ 0.87
RN7SL411P-201ENST00000585204 SHROOM4Q9ULL8 1493 aa20.2■□□□□ 0.82
RN7SL411P-201ENST00000585204 EIF4G1Q04637 1599 aaKnown RBP20.06■□□□□ 0.8
RN7SL411P-201ENST00000585204 CC2D2AQ9P2K1 1620 aa20.04■□□□□ 0.8
RN7SL411P-201ENST00000585204 CECR2Q9BXF3 1484 aa19.82■□□□□ 0.76
RN7SL411P-201ENST00000585204 SMARCA4P51532 1647 aa19.62■□□□□ 0.73
RN7SL411P-201ENST00000585204 BAZ1AQ9NRL2 1556 aaPredicted RBP19.49■□□□□ 0.71
RN7SL411P-201ENST00000585204 ATAD2BQ9ULI0 1458 aa19.48■□□□□ 0.71
RN7SL411P-201ENST00000585204 MROH2BQ7Z745 1585 aa19.48■□□□□ 0.71
RN7SL411P-201ENST00000585204 NCAPD3P42695 1498 aa19.47■□□□□ 0.71
RN7SL411P-201ENST00000585204 PEG3Q9GZU2 1588 aa19.42■□□□□ 0.7
RN7SL411P-201ENST00000585204 SMARCA2P51531 1590 aa19.4■□□□□ 0.7
RN7SL411P-201ENST00000585204 HMGXB3Q12766 1538 aa19.38■□□□□ 0.69
RN7SL411P-201ENST00000585204 WIZO95785 1651 aa19.33■□□□□ 0.68
RN7SL411P-201ENST00000585204 BAZ1BQ9UIG0 1483 aaKnown RBP19.27■□□□□ 0.67
RN7SL411P-201ENST00000585204 NESP48681 1621 aa19.17■□□□□ 0.66
RN7SL411P-201ENST00000585204 RSF1Q96T23 1441 aaPredicted RBP19.15■□□□□ 0.66
RN7SL411P-201ENST00000585204 KIF21AQ7Z4S6 1674 aa19.02■□□□□ 0.64
RN7SL411P-201ENST00000585204 LAMC3Q9Y6N6 1575 aa18.99■□□□□ 0.63
RN7SL411P-201ENST00000585204 TOP2AP11388 1531 aaKnown RBP18.98■□□□□ 0.63
RN7SL411P-201ENST00000585204 ERCC6Q03468 1493 aa18.93■□□□□ 0.62
RN7SL411P-201ENST00000585204 THOC2Q8NI27 1593 aaKnown RBP18.92■□□□□ 0.62
RN7SL411P-201ENST00000585204 CADPSQ9ULU8 1353 aa18.85■□□□□ 0.61
RN7SL411P-201ENST00000585204 CUX2O14529 1486 aa18.81■□□□□ 0.6
RN7SL411P-201ENST00000585204 PRDM2Q13029 1718 aa18.8■□□□□ 0.6
RN7SL411P-201ENST00000585204 CCDC88BA6NC98 1476 aa18.78■□□□□ 0.6
RN7SL411P-201ENST00000585204 CFTRP13569 1480 aa18.77■□□□□ 0.59
RN7SL411P-201ENST00000585204 PDS5BQ9NTI5 1447 aa18.75■□□□□ 0.59
RN7SL411P-201ENST00000585204 FANCD2Q9BXW9 1451 aa18.67■□□□□ 0.58
RN7SL411P-201ENST00000585204 MRC2Q9UBG0 1479 aa18.65■□□□□ 0.58
RN7SL411P-201ENST00000585204 WDR62O43379 1518 aa18.65■□□□□ 0.58
RN7SL411P-201ENST00000585204 CEP164Q9UPV0 1460 aa18.63■□□□□ 0.57
RN7SL411P-201ENST00000585204 URB2Q14146 1524 aaKnown RBP18.59■□□□□ 0.57
RN7SL411P-201ENST00000585204 SUPT5HO00267 1087 aaKnown RBP18.48■□□□□ 0.55
RN7SL411P-201ENST00000585204 DNAJC5Q9H3Z4 198 aa18.41■□□□□ 0.54
RN7SL411P-201ENST00000585204 TOPBP1Q92547 1522 aa18.4■□□□□ 0.54
RN7SL411P-201ENST00000585204 DNMBPQ6XZF7 1577 aa18.37■□□□□ 0.53
RN7SL411P-201ENST00000585204 TARBP1Q13395 1621 aaKnown RBP18.31■□□□□ 0.52
RN7SL411P-201ENST00000585204 ZNF608Q9ULD9 1512 aaPredicted RBP18.29■□□□□ 0.52
RN7SL411P-201ENST00000585204 CUX1P39880 1505 aa18.27■□□□□ 0.51
RN7SL411P-201ENST00000585204 ABCC8Q09428 1581 aa18.26■□□□□ 0.51
RN7SL411P-201ENST00000585204 POLA1P09884 1462 aaPredicted RBP18.24■□□□□ 0.51
RN7SL411P-201ENST00000585204 IFT140Q96RY7 1462 aa18.24■□□□□ 0.51
RN7SL411P-201ENST00000585204 EIF4G3O43432 1585 aaKnown RBP18.22■□□□□ 0.51
RN7SL411P-201ENST00000585204 RAD54L2Q9Y4B4 1467 aa18.2■□□□□ 0.5
RN7SL411P-201ENST00000585204 WDR97A6NE52 1622 aa18.18■□□□□ 0.5
RN7SL411P-201ENST00000585204 FGD5Q6ZNL6 1462 aa18.17■□□□□ 0.5
RN7SL411P-201ENST00000585204 AQRO60306 1485 aaKnown RBP eCLIP18.13■□□□□ 0.49
RN7SL411P-201ENST00000585204 CHD1O14646 1710 aa18.12■□□□□ 0.49
RN7SL411P-201ENST00000585204 BIVM-ERCC5R4GMW8 1640 aa18.11■□□□□ 0.49
RN7SL411P-201ENST00000585204 SYNJ1O43426 1573 aa18.1■□□□□ 0.49
RN7SL411P-201ENST00000585204 SOGA1O94964 1423 aa18.09■□□□□ 0.49
RN7SL411P-201ENST00000585204 TOP2BQ02880 1626 aa18.05■□□□□ 0.48
RN7SL411P-201ENST00000585204 TDRD9Q8NDG6 1382 aaKnown RBP18.04■□□□□ 0.48
RN7SL411P-201ENST00000585204 PBRM1Q86U86 1689 aa18.04■□□□□ 0.48
RN7SL411P-201ENST00000585204 ABCA5Q8WWZ7 1642 aa17.99■□□□□ 0.47
RN7SL411P-201ENST00000585204 WRNQ14191 1432 aaPredicted RBP eCLIP17.98■□□□□ 0.47
RN7SL411P-201ENST00000585204 ABCA10Q8WWZ4 1543 aa17.97■□□□□ 0.47
RN7SL411P-201ENST00000585204 OSCARQ8IYS5 282 aa17.96■□□□□ 0.47
RN7SL411P-201ENST00000585204 SNAPC4Q5SXM2 1469 aa17.94■□□□□ 0.46
RN7SL411P-201ENST00000585204 RIMBP3CA6NJZ7 1639 aa17.9■□□□□ 0.46
RN7SL411P-201ENST00000585204 RIMBP3BA6NNM3 1639 aa17.9■□□□□ 0.46
RN7SL411P-201ENST00000585204 RIMBP3Q9UFD9 1639 aa17.9■□□□□ 0.46
RN7SL411P-201ENST00000585204 GAPVD1Q14C86 1478 aa17.89■□□□□ 0.45
RN7SL411P-201ENST00000585204 GRIN2BQ13224 1484 aa17.88■□□□□ 0.45
RN7SL411P-201ENST00000585204 MAGI1Q96QZ7 1491 aaPredicted RBP17.85■□□□□ 0.45
RN7SL411P-201ENST00000585204 CLASP1Q7Z460 1538 aa17.82■□□□□ 0.44
RN7SL411P-201ENST00000585204 FBLN2P98095 1184 aa17.8■□□□□ 0.44
RN7SL411P-201ENST00000585204 ARHGEF11O15085 1522 aa17.8■□□□□ 0.44
RN7SL411P-201ENST00000585204 SYNJ2O15056 1496 aa17.8■□□□□ 0.44
RN7SL411P-201ENST00000585204 ADAMTS12P58397 1594 aa17.79■□□□□ 0.44
RN7SL411P-201ENST00000585204 ERICH3Q5RHP9 1530 aa17.73■□□□□ 0.43
RN7SL411P-201ENST00000585204 CEP170Q5SW79 1584 aa17.72■□□□□ 0.43
RN7SL411P-201ENST00000585204 CHMP7Q8WUX9 453 aaPredicted RBP17.72■□□□□ 0.43
RN7SL411P-201ENST00000585204 TRIM41Q8WV44 630 aa17.71■□□□□ 0.43
RN7SL411P-201ENST00000585204 GRIN2AQ12879 1464 aa17.69■□□□□ 0.42
RN7SL411P-201ENST00000585204 ARAP1Q96P48 1450 aa17.67■□□□□ 0.42
RN7SL411P-201ENST00000585204 FHAD1B1AJZ9 1412 aa17.65■□□□□ 0.42
RN7SL411P-201ENST00000585204 ERCC6L2Q5T890 1561 aa17.65■□□□□ 0.42
RN7SL411P-201ENST00000585204 NUP160Q12769 1436 aa17.64■□□□□ 0.41
RN7SL411P-201ENST00000585204 SHROOM2Q13796 1616 aa17.61■□□□□ 0.41
RN7SL411P-201ENST00000585204 IGF1RP08069 1367 aa17.6■□□□□ 0.41
RN7SL411P-201ENST00000585204 RUSC2Q8N2Y8 1516 aa17.6■□□□□ 0.41
RN7SL411P-201ENST00000585204 CUL7Q14999 1698 aa17.58■□□□□ 0.41
RN7SL411P-201ENST00000585204 KIF27Q86VH2 1401 aa17.55■□□□□ 0.4
RN7SL411P-201ENST00000585204 CYB5RLQ6IPT4 315 aa17.55■□□□□ 0.4
RN7SL411P-201ENST00000585204 CARMIL1Q5VZK9 1371 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms