RNA–Protein interactions for RNA: ENST00000585178.1

LAMA1-208, Transcript of laminin subunit alpha 1, humanhuman

TSL 3

Gene LAMA1, Length 541 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1-208ENST00000585178 NISCHQ9Y2I1 1504 aa26.37■■□□□ 1.81
LAMA1-208ENST00000585178 CCDC180Q9P1Z9 1646 aa23.67■■□□□ 1.38
LAMA1-208ENST00000585178 ABCC9O60706 1549 aa23.35■■□□□ 1.33
LAMA1-208ENST00000585178 RB1CC1Q8TDY2 1594 aa22.38■■□□□ 1.17
LAMA1-208ENST00000585178 NACADO15069 1562 aa22.29■■□□□ 1.16
LAMA1-208ENST00000585178 MYO15BQ96JP2 1530 aa22.11■■□□□ 1.13
LAMA1-208ENST00000585178 ZCCHC6Q5VYS8 1495 aaKnown RBP21.96■■□□□ 1.11
LAMA1-208ENST00000585178 DCAF8L2P0C7V8 631 aa21.9■■□□□ 1.1
LAMA1-208ENST00000585178 DCAF1Q9Y4B6 1507 aa21.87■■□□□ 1.09
LAMA1-208ENST00000585178 UNC13AQ9UPW8 1703 aa21.86■■□□□ 1.09
LAMA1-208ENST00000585178 BICRAQ9NZM4 1560 aa21.74■■□□□ 1.07
LAMA1-208ENST00000585178 PABPN1Q86U42 306 aaKnown RBP eCLIP21.67■■□□□ 1.06
LAMA1-208ENST00000585178 DNAJC5BQ9UF47 199 aa21.67■■□□□ 1.06
LAMA1-208ENST00000585178 SHROOM4Q9ULL8 1493 aa21.57■■□□□ 1.04
LAMA1-208ENST00000585178 SCRIBQ14160 1630 aa21.49■■□□□ 1.03
LAMA1-208ENST00000585178 EIF4G1Q04637 1599 aaKnown RBP21.19■□□□□ 0.98
LAMA1-208ENST00000585178 CC2D2AQ9P2K1 1620 aa21.15■□□□□ 0.98
LAMA1-208ENST00000585178 CECR2Q9BXF3 1484 aa21.05■□□□□ 0.96
LAMA1-208ENST00000585178 SMARCA4P51532 1647 aa20.56■□□□□ 0.88
LAMA1-208ENST00000585178 NCAPD3P42695 1498 aa20.55■□□□□ 0.88
LAMA1-208ENST00000585178 ATAD2BQ9ULI0 1458 aa20.5■□□□□ 0.87
LAMA1-208ENST00000585178 SMARCA2P51531 1590 aa20.48■□□□□ 0.87
LAMA1-208ENST00000585178 BAZ1AQ9NRL2 1556 aaPredicted RBP20.48■□□□□ 0.87
LAMA1-208ENST00000585178 HMGXB3Q12766 1538 aa20.48■□□□□ 0.87
LAMA1-208ENST00000585178 PEG3Q9GZU2 1588 aa20.42■□□□□ 0.86
LAMA1-208ENST00000585178 BAZ1BQ9UIG0 1483 aaKnown RBP20.3■□□□□ 0.84
LAMA1-208ENST00000585178 MROH2BQ7Z745 1585 aa20.3■□□□□ 0.84
LAMA1-208ENST00000585178 ERCC6Q03468 1493 aa20.16■□□□□ 0.82
LAMA1-208ENST00000585178 CUX2O14529 1486 aa20.14■□□□□ 0.81
LAMA1-208ENST00000585178 NESP48681 1621 aa20.12■□□□□ 0.81
LAMA1-208ENST00000585178 LAMC3Q9Y6N6 1575 aa20.08■□□□□ 0.81
LAMA1-208ENST00000585178 WIZO95785 1651 aa20.05■□□□□ 0.8
LAMA1-208ENST00000585178 THOC2Q8NI27 1593 aaKnown RBP20■□□□□ 0.79
LAMA1-208ENST00000585178 RSF1Q96T23 1441 aaPredicted RBP19.93■□□□□ 0.78
LAMA1-208ENST00000585178 PDS5BQ9NTI5 1447 aa19.91■□□□□ 0.78
LAMA1-208ENST00000585178 KIF21AQ7Z4S6 1674 aa19.91■□□□□ 0.78
LAMA1-208ENST00000585178 CADPSQ9ULU8 1353 aa19.89■□□□□ 0.77
LAMA1-208ENST00000585178 TOP2AP11388 1531 aaKnown RBP19.88■□□□□ 0.77
LAMA1-208ENST00000585178 DNAJC5Q9H3Z4 198 aa19.79■□□□□ 0.76
LAMA1-208ENST00000585178 MRC2Q9UBG0 1479 aa19.76■□□□□ 0.75
LAMA1-208ENST00000585178 WDR62O43379 1518 aa19.76■□□□□ 0.75
LAMA1-208ENST00000585178 CFTRP13569 1480 aa19.75■□□□□ 0.75
LAMA1-208ENST00000585178 CEP164Q9UPV0 1460 aa19.72■□□□□ 0.75
LAMA1-208ENST00000585178 FANCD2Q9BXW9 1451 aa19.68■□□□□ 0.74
LAMA1-208ENST00000585178 PRDM2Q13029 1718 aa19.6■□□□□ 0.73
LAMA1-208ENST00000585178 CCDC88BA6NC98 1476 aa19.58■□□□□ 0.72
LAMA1-208ENST00000585178 URB2Q14146 1524 aaKnown RBP19.53■□□□□ 0.72
LAMA1-208ENST00000585178 TOPBP1Q92547 1522 aa19.35■□□□□ 0.69
LAMA1-208ENST00000585178 DNMBPQ6XZF7 1577 aa19.32■□□□□ 0.68
LAMA1-208ENST00000585178 ABCC8Q09428 1581 aa19.32■□□□□ 0.68
LAMA1-208ENST00000585178 IFT140Q96RY7 1462 aa19.31■□□□□ 0.68
LAMA1-208ENST00000585178 ZNF608Q9ULD9 1512 aaPredicted RBP19.24■□□□□ 0.67
LAMA1-208ENST00000585178 EIF4G3O43432 1585 aaKnown RBP19.21■□□□□ 0.67
LAMA1-208ENST00000585178 TARBP1Q13395 1621 aaKnown RBP19.18■□□□□ 0.66
LAMA1-208ENST00000585178 POLA1P09884 1462 aaPredicted RBP19.17■□□□□ 0.66
LAMA1-208ENST00000585178 OSCARQ8IYS5 282 aa19.09■□□□□ 0.65
LAMA1-208ENST00000585178 WDR97A6NE52 1622 aa19.08■□□□□ 0.65
LAMA1-208ENST00000585178 CUX1P39880 1505 aa19.08■□□□□ 0.64
LAMA1-208ENST00000585178 FGD5Q6ZNL6 1462 aa19.06■□□□□ 0.64
LAMA1-208ENST00000585178 AQRO60306 1485 aaKnown RBP eCLIP19.03■□□□□ 0.64
LAMA1-208ENST00000585178 RAD54L2Q9Y4B4 1467 aa19.03■□□□□ 0.64
LAMA1-208ENST00000585178 SOGA1O94964 1423 aa19■□□□□ 0.63
LAMA1-208ENST00000585178 SUPT5HO00267 1087 aaKnown RBP18.99■□□□□ 0.63
LAMA1-208ENST00000585178 CHD1O14646 1710 aa18.97■□□□□ 0.63
LAMA1-208ENST00000585178 RIMBP3CA6NJZ7 1639 aa18.95■□□□□ 0.62
LAMA1-208ENST00000585178 RIMBP3BA6NNM3 1639 aa18.95■□□□□ 0.62
LAMA1-208ENST00000585178 RIMBP3Q9UFD9 1639 aa18.95■□□□□ 0.62
LAMA1-208ENST00000585178 TDRD9Q8NDG6 1382 aaKnown RBP18.93■□□□□ 0.62
LAMA1-208ENST00000585178 ARHGEF11O15085 1522 aa18.92■□□□□ 0.62
LAMA1-208ENST00000585178 TRIM41Q8WV44 630 aa18.92■□□□□ 0.62
LAMA1-208ENST00000585178 SNAPC4Q5SXM2 1469 aa18.91■□□□□ 0.62
LAMA1-208ENST00000585178 MAGI1Q96QZ7 1491 aaPredicted RBP18.9■□□□□ 0.62
LAMA1-208ENST00000585178 GRIN2BQ13224 1484 aa18.89■□□□□ 0.61
LAMA1-208ENST00000585178 ABCA10Q8WWZ4 1543 aa18.88■□□□□ 0.61
LAMA1-208ENST00000585178 ABCA5Q8WWZ7 1642 aa18.88■□□□□ 0.61
LAMA1-208ENST00000585178 BIVM-ERCC5R4GMW8 1640 aa18.86■□□□□ 0.61
LAMA1-208ENST00000585178 PBRM1Q86U86 1689 aa18.85■□□□□ 0.61
LAMA1-208ENST00000585178 TOP2BQ02880 1626 aa18.85■□□□□ 0.61
LAMA1-208ENST00000585178 CLASP1Q7Z460 1538 aa18.83■□□□□ 0.6
LAMA1-208ENST00000585178 SYNJ2O15056 1496 aa18.82■□□□□ 0.6
LAMA1-208ENST00000585178 GAPVD1Q14C86 1478 aa18.82■□□□□ 0.6
LAMA1-208ENST00000585178 SYNJ1O43426 1573 aa18.81■□□□□ 0.6
LAMA1-208ENST00000585178 WRNQ14191 1432 aaPredicted RBP eCLIP18.8■□□□□ 0.6
LAMA1-208ENST00000585178 FBLN2P98095 1184 aa18.76■□□□□ 0.59
LAMA1-208ENST00000585178 ARAP1Q96P48 1450 aa18.75■□□□□ 0.59
LAMA1-208ENST00000585178 ADAMTS12P58397 1594 aa18.72■□□□□ 0.59
LAMA1-208ENST00000585178 CHMP7Q8WUX9 453 aaPredicted RBP18.7■□□□□ 0.58
LAMA1-208ENST00000585178 GRIN2AQ12879 1464 aa18.66■□□□□ 0.58
LAMA1-208ENST00000585178 ERICH3Q5RHP9 1530 aa18.66■□□□□ 0.58
LAMA1-208ENST00000585178 NUP160Q12769 1436 aa18.61■□□□□ 0.57
LAMA1-208ENST00000585178 FHAD1B1AJZ9 1412 aa18.6■□□□□ 0.57
LAMA1-208ENST00000585178 CYB5RLQ6IPT4 315 aa18.6■□□□□ 0.57
LAMA1-208ENST00000585178 CEP170Q5SW79 1584 aa18.59■□□□□ 0.57
LAMA1-208ENST00000585178 SHROOM2Q13796 1616 aa18.53■□□□□ 0.56
LAMA1-208ENST00000585178 ERCC6L2Q5T890 1561 aa18.48■□□□□ 0.55
LAMA1-208ENST00000585178 RUSC2Q8N2Y8 1516 aa18.47■□□□□ 0.55
LAMA1-208ENST00000585178 CUL7Q14999 1698 aa18.44■□□□□ 0.54
LAMA1-208ENST00000585178 KIF27Q86VH2 1401 aa18.42■□□□□ 0.54
LAMA1-208ENST00000585178 IGF1RP08069 1367 aa18.36■□□□□ 0.53
LAMA1-208ENST00000585178 PRG4Q92954 1404 aaPredicted RBP18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms