RNA–Protein interactions for RNA: ENST00000585140.1

ASPSCR1-220, Transcript of ASPSCR1, UBX domain containing tether for SLC2A4, humanhuman

TSL 3

Gene ASPSCR1, Length 447 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ASPSCR1-220ENST00000585140 NISCHQ9Y2I1 1504 aa46.55■■■■■ 5.04
ASPSCR1-220ENST00000585140 ABCC9O60706 1549 aa41.84■■■■■ 4.29
ASPSCR1-220ENST00000585140 CCDC180Q9P1Z9 1646 aa41.76■■■■■ 4.28
ASPSCR1-220ENST00000585140 RB1CC1Q8TDY2 1594 aa39.8■■■■□ 3.96
ASPSCR1-220ENST00000585140 NACADO15069 1562 aa39.53■■■■□ 3.92
ASPSCR1-220ENST00000585140 DNAJC5BQ9UF47 199 aa39.33■■■■□ 3.89
ASPSCR1-220ENST00000585140 DCAF8L2P0C7V8 631 aa39.29■■■■□ 3.88
ASPSCR1-220ENST00000585140 MYO15BQ96JP2 1530 aa38.99■■■■□ 3.83
ASPSCR1-220ENST00000585140 PABPN1Q86U42 306 aaKnown RBP eCLIP38.96■■■■□ 3.832e-11■■■□□ 16.5
ASPSCR1-220ENST00000585140 UNC13AQ9UPW8 1703 aa38.85■■■■□ 3.81
ASPSCR1-220ENST00000585140 BICRAQ9NZM4 1560 aa38.65■■■■□ 3.78
ASPSCR1-220ENST00000585140 ZCCHC6Q5VYS8 1495 aaKnown RBP38.57■■■■□ 3.76
ASPSCR1-220ENST00000585140 DCAF1Q9Y4B6 1507 aa38.47■■■■□ 3.75
ASPSCR1-220ENST00000585140 SHROOM4Q9ULL8 1493 aa38.15■■■■□ 3.7
ASPSCR1-220ENST00000585140 SCRIBQ14160 1630 aa38.05■■■■□ 3.68
ASPSCR1-220ENST00000585140 CC2D2AQ9P2K1 1620 aa37.79■■■■□ 3.64
ASPSCR1-220ENST00000585140 CECR2Q9BXF3 1484 aa37.71■■■■□ 3.63
ASPSCR1-220ENST00000585140 EIF4G1Q04637 1599 aaKnown RBP37.7■■■■□ 3.63
ASPSCR1-220ENST00000585140 NCAPD3P42695 1498 aa36.51■■■■□ 3.44
ASPSCR1-220ENST00000585140 ATAD2BQ9ULI0 1458 aa36.39■■■■□ 3.42
ASPSCR1-220ENST00000585140 SMARCA4P51532 1647 aa36.3■■■■□ 3.4
ASPSCR1-220ENST00000585140 SMARCA2P51531 1590 aa36.27■■■■□ 3.4
ASPSCR1-220ENST00000585140 HMGXB3Q12766 1538 aa36.22■■■■□ 3.39
ASPSCR1-220ENST00000585140 DNAJC5Q9H3Z4 198 aa36.16■■■■□ 3.38
ASPSCR1-220ENST00000585140 BAZ1AQ9NRL2 1556 aaPredicted RBP36.13■■■■□ 3.37
ASPSCR1-220ENST00000585140 ERCC6Q03468 1493 aa36.12■■■■□ 3.37
ASPSCR1-220ENST00000585140 CUX2O14529 1486 aa36.11■■■■□ 3.37
ASPSCR1-220ENST00000585140 BAZ1BQ9UIG0 1483 aaKnown RBP36.01■■■■□ 3.36
ASPSCR1-220ENST00000585140 PEG3Q9GZU2 1588 aa35.98■■■■□ 3.35
ASPSCR1-220ENST00000585140 NESP48681 1621 aa35.93■■■■□ 3.34
ASPSCR1-220ENST00000585140 MROH2BQ7Z745 1585 aa35.86■■■■□ 3.33
ASPSCR1-220ENST00000585140 LAMC3Q9Y6N6 1575 aa35.67■■■■□ 3.3
ASPSCR1-220ENST00000585140 THOC2Q8NI27 1593 aaKnown RBP35.56■■■■□ 3.28
ASPSCR1-220ENST00000585140 PDS5BQ9NTI5 1447 aa35.49■■■■□ 3.27
ASPSCR1-220ENST00000585140 KIF21AQ7Z4S6 1674 aa35.42■■■■□ 3.26
ASPSCR1-220ENST00000585140 CADPSQ9ULU8 1353 aa35.4■■■■□ 3.26
ASPSCR1-220ENST00000585140 WIZO95785 1651 aa35.4■■■■□ 3.26
ASPSCR1-220ENST00000585140 MRC2Q9UBG0 1479 aa35.17■■■■□ 3.22
ASPSCR1-220ENST00000585140 RSF1Q96T23 1441 aaPredicted RBP35.12■■■■□ 3.21
ASPSCR1-220ENST00000585140 WDR62O43379 1518 aa35.09■■■■□ 3.21
ASPSCR1-220ENST00000585140 CEP164Q9UPV0 1460 aa35.02■■■■□ 3.2
ASPSCR1-220ENST00000585140 CFTRP13569 1480 aa34.98■■■■□ 3.19
ASPSCR1-220ENST00000585140 FANCD2Q9BXW9 1451 aa34.98■■■■□ 3.19
ASPSCR1-220ENST00000585140 TOP2AP11388 1531 aaKnown RBP34.97■■■■□ 3.19
ASPSCR1-220ENST00000585140 URB2Q14146 1524 aaKnown RBP34.7■■■■□ 3.14
ASPSCR1-220ENST00000585140 CCDC88BA6NC98 1476 aa34.59■■■■□ 3.13
ASPSCR1-220ENST00000585140 PRDM2Q13029 1718 aa34.55■■■■□ 3.12
ASPSCR1-220ENST00000585140 TRIM41Q8WV44 630 aa34.51■■■■□ 3.12
ASPSCR1-220ENST00000585140 OSCARQ8IYS5 282 aa34.45■■■■□ 3.11
ASPSCR1-220ENST00000585140 IFT140Q96RY7 1462 aa34.33■■■■□ 3.09
ASPSCR1-220ENST00000585140 TOPBP1Q92547 1522 aa34.31■■■■□ 3.08
ASPSCR1-220ENST00000585140 ZNF608Q9ULD9 1512 aaPredicted RBP34.28■■■■□ 3.08
ASPSCR1-220ENST00000585140 ABCC8Q09428 1581 aa34.24■■■■□ 3.07
ASPSCR1-220ENST00000585140 DNMBPQ6XZF7 1577 aa34.17■■■■□ 3.06
ASPSCR1-220ENST00000585140 EIF4G3O43432 1585 aaKnown RBP34.06■■■■□ 3.04
ASPSCR1-220ENST00000585140 TARBP1Q13395 1621 aaKnown RBP34■■■■□ 3.03
ASPSCR1-220ENST00000585140 RIMBP3CA6NJZ7 1639 aa33.97■■■■□ 3.03
ASPSCR1-220ENST00000585140 RIMBP3BA6NNM3 1639 aa33.97■■■■□ 3.03
ASPSCR1-220ENST00000585140 RIMBP3Q9UFD9 1639 aa33.97■■■■□ 3.03
ASPSCR1-220ENST00000585140 AQRO60306 1485 aaKnown RBP eCLIP33.96■■■■□ 3.036e-8■■■■■ 28.9
ASPSCR1-220ENST00000585140 POLA1P09884 1462 aaPredicted RBP33.96■■■■□ 3.03
ASPSCR1-220ENST00000585140 ARHGEF11O15085 1522 aa33.89■■■■□ 3.02
ASPSCR1-220ENST00000585140 RAD54L2Q9Y4B4 1467 aa33.83■■■■□ 3.01
ASPSCR1-220ENST00000585140 SOGA1O94964 1423 aa33.8■■■■□ 3
ASPSCR1-220ENST00000585140 CHD1O14646 1710 aa33.79■■■■□ 3
ASPSCR1-220ENST00000585140 TDRD9Q8NDG6 1382 aaKnown RBP33.75■■■□□ 2.99
ASPSCR1-220ENST00000585140 FBLN2P98095 1184 aa33.73■■■□□ 2.99
ASPSCR1-220ENST00000585140 FGD5Q6ZNL6 1462 aa33.73■■■□□ 2.99
ASPSCR1-220ENST00000585140 CUX1P39880 1505 aa33.7■■■□□ 2.99
ASPSCR1-220ENST00000585140 WDR97A6NE52 1622 aa33.66■■■□□ 2.98
ASPSCR1-220ENST00000585140 CYB5RLQ6IPT4 315 aa33.64■■■□□ 2.98
ASPSCR1-220ENST00000585140 SNAPC4Q5SXM2 1469 aa33.61■■■□□ 2.97
ASPSCR1-220ENST00000585140 ARAP1Q96P48 1450 aa33.55■■■□□ 2.96
ASPSCR1-220ENST00000585140 MAGI1Q96QZ7 1491 aaPredicted RBP33.53■■■□□ 2.96
ASPSCR1-220ENST00000585140 GRIN2BQ13224 1484 aa33.52■■■□□ 2.96
ASPSCR1-220ENST00000585140 CHMP7Q8WUX9 453 aaPredicted RBP33.5■■■□□ 2.95
ASPSCR1-220ENST00000585140 SUPT5HO00267 1087 aaKnown RBP33.49■■■□□ 2.95
ASPSCR1-220ENST00000585140 CLASP1Q7Z460 1538 aa33.46■■■□□ 2.95
ASPSCR1-220ENST00000585140 SYNJ2O15056 1496 aa33.42■■■□□ 2.94
ASPSCR1-220ENST00000585140 SYNJ1O43426 1573 aa33.42■■■□□ 2.94
ASPSCR1-220ENST00000585140 GAPVD1Q14C86 1478 aa33.39■■■□□ 2.94
ASPSCR1-220ENST00000585140 ABCA10Q8WWZ4 1543 aa33.36■■■□□ 2.93
ASPSCR1-220ENST00000585140 PBRM1Q86U86 1689 aa33.33■■■□□ 2.93
ASPSCR1-220ENST00000585140 ABCA5Q8WWZ7 1642 aa33.29■■■□□ 2.92
ASPSCR1-220ENST00000585140 TRHP20396 242 aaPredicted RBP33.26■■■□□ 2.91
ASPSCR1-220ENST00000585140 WRNQ14191 1432 aaPredicted RBP eCLIP33.21■■■□□ 2.91
ASPSCR1-220ENST00000585140 TOP2BQ02880 1626 aa33.13■■■□□ 2.89
ASPSCR1-220ENST00000585140 BIVM-ERCC5R4GMW8 1640 aa33.12■■■□□ 2.89
ASPSCR1-220ENST00000585140 GRIN2AQ12879 1464 aa33.09■■■□□ 2.89
ASPSCR1-220ENST00000585140 ADAMTS12P58397 1594 aa33.04■■■□□ 2.88
ASPSCR1-220ENST00000585140 NUP160Q12769 1436 aa33■■■□□ 2.87
ASPSCR1-220ENST00000585140 FHAD1B1AJZ9 1412 aa32.98■■■□□ 2.87
ASPSCR1-220ENST00000585140 CEP170Q5SW79 1584 aa32.96■■■□□ 2.87
ASPSCR1-220ENST00000585140 ERICH3Q5RHP9 1530 aa32.93■■■□□ 2.86
ASPSCR1-220ENST00000585140 ERCC6L2Q5T890 1561 aa32.92■■■□□ 2.86
ASPSCR1-220ENST00000585140 SHROOM2Q13796 1616 aa32.83■■■□□ 2.85
ASPSCR1-220ENST00000585140 PRG4Q92954 1404 aaPredicted RBP32.67■■■□□ 2.82
ASPSCR1-220ENST00000585140 JPH4Q96JJ6 628 aa32.66■■■□□ 2.82
ASPSCR1-220ENST00000585140 RUSC2Q8N2Y8 1516 aa32.58■■■□□ 2.81
ASPSCR1-220ENST00000585140 IGF1RP08069 1367 aa32.52■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms