RNA–Protein interactions for RNA: ENST00000585095.1

PER1-218, Transcript of period circadian regulator 1, humanhuman

TSL 3

Gene PER1, Length 691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PER1-218ENST00000585095 NISCHQ9Y2I1 1504 aa36.69■■■■□ 3.46
PER1-218ENST00000585095 ABCC9O60706 1549 aa33.79■■■■□ 3
PER1-218ENST00000585095 CCDC180Q9P1Z9 1646 aa33.16■■■□□ 2.9
PER1-218ENST00000585095 DNAJC5BQ9UF47 199 aa32.39■■■□□ 2.78
PER1-218ENST00000585095 RB1CC1Q8TDY2 1594 aa31.83■■■□□ 2.69
PER1-218ENST00000585095 NACADO15069 1562 aa31.48■■■□□ 2.63
PER1-218ENST00000585095 PABPN1Q86U42 306 aaKnown RBP eCLIP31.37■■■□□ 2.61
PER1-218ENST00000585095 UNC13AQ9UPW8 1703 aa31.24■■■□□ 2.59
PER1-218ENST00000585095 DCAF8L2P0C7V8 631 aa31.11■■■□□ 2.57
PER1-218ENST00000585095 BICRAQ9NZM4 1560 aa31.08■■■□□ 2.57
PER1-218ENST00000585095 MYO15BQ96JP2 1530 aa30.86■■■□□ 2.53
PER1-218ENST00000585095 CC2D2AQ9P2K1 1620 aa30.51■■■□□ 2.48
PER1-218ENST00000585095 CECR2Q9BXF3 1484 aa30.49■■■□□ 2.47
PER1-218ENST00000585095 SHROOM4Q9ULL8 1493 aa30.44■■■□□ 2.46
PER1-218ENST00000585095 EIF4G1Q04637 1599 aaKnown RBP30.28■■■□□ 2.44
PER1-218ENST00000585095 ZCCHC6Q5VYS8 1495 aaKnown RBP30.27■■■□□ 2.44
PER1-218ENST00000585095 DCAF1Q9Y4B6 1507 aa30.25■■■□□ 2.43
PER1-218ENST00000585095 SCRIBQ14160 1630 aa30.18■■■□□ 2.42
PER1-218ENST00000585095 DNAJC5Q9H3Z4 198 aa30.09■■■□□ 2.41
PER1-218ENST00000585095 CUX2O14529 1486 aa29.33■■■□□ 2.29
PER1-218ENST00000585095 NCAPD3P42695 1498 aa29.12■■■□□ 2.25
PER1-218ENST00000585095 ERCC6Q03468 1493 aa29.11■■■□□ 2.25
PER1-218ENST00000585095 ATAD2BQ9ULI0 1458 aa28.94■■■□□ 2.22
PER1-218ENST00000585095 NESP48681 1621 aa28.91■■■□□ 2.22
PER1-218ENST00000585095 HMGXB3Q12766 1538 aa28.81■■■□□ 2.2
PER1-218ENST00000585095 SMARCA2P51531 1590 aa28.75■■■□□ 2.19
PER1-218ENST00000585095 SMARCA4P51532 1647 aa28.75■■■□□ 2.19
PER1-218ENST00000585095 THOC2Q8NI27 1593 aaKnown RBP28.72■■■□□ 2.19
PER1-218ENST00000585095 BAZ1BQ9UIG0 1483 aaKnown RBP28.56■■■□□ 2.16
PER1-218ENST00000585095 LAMC3Q9Y6N6 1575 aa28.51■■■□□ 2.15
PER1-218ENST00000585095 PEG3Q9GZU2 1588 aa28.5■■■□□ 2.15
PER1-218ENST00000585095 KIF21AQ7Z4S6 1674 aa28.48■■■□□ 2.15
PER1-218ENST00000585095 BAZ1AQ9NRL2 1556 aaPredicted RBP28.46■■■□□ 2.15
PER1-218ENST00000585095 TRIM41Q8WV44 630 aa28.43■■■□□ 2.14
PER1-218ENST00000585095 PDS5BQ9NTI5 1447 aa28.33■■■□□ 2.13
PER1-218ENST00000585095 MROH2BQ7Z745 1585 aa28.29■■■□□ 2.12
PER1-218ENST00000585095 MRC2Q9UBG0 1479 aa28.17■■■□□ 2.1
PER1-218ENST00000585095 CADPSQ9ULU8 1353 aa28.17■■■□□ 2.1
PER1-218ENST00000585095 WDR62O43379 1518 aa28.16■■■□□ 2.1
PER1-218ENST00000585095 WIZO95785 1651 aa27.91■■■□□ 2.06
PER1-218ENST00000585095 CEP164Q9UPV0 1460 aa27.9■■■□□ 2.06
PER1-218ENST00000585095 OSCARQ8IYS5 282 aa27.86■■■□□ 2.05
PER1-218ENST00000585095 FANCD2Q9BXW9 1451 aa27.85■■■□□ 2.05
PER1-218ENST00000585095 CFTRP13569 1480 aa27.75■■■□□ 2.03
PER1-218ENST00000585095 URB2Q14146 1524 aaKnown RBP27.72■■■□□ 2.03
PER1-218ENST00000585095 RIMBP3CA6NJZ7 1639 aa27.65■■■□□ 2.02
PER1-218ENST00000585095 RIMBP3BA6NNM3 1639 aa27.65■■■□□ 2.02
PER1-218ENST00000585095 RIMBP3Q9UFD9 1639 aa27.65■■■□□ 2.02
PER1-218ENST00000585095 ARHGEF11O15085 1522 aa27.49■■□□□ 1.99
PER1-218ENST00000585095 ZNF608Q9ULD9 1512 aaPredicted RBP27.49■■□□□ 1.99
PER1-218ENST00000585095 TOP2AP11388 1531 aaKnown RBP27.46■■□□□ 1.99
PER1-218ENST00000585095 RSF1Q96T23 1441 aaPredicted RBP27.46■■□□□ 1.99
PER1-218ENST00000585095 PRDM2Q13029 1718 aa27.38■■□□□ 1.97
PER1-218ENST00000585095 IFT140Q96RY7 1462 aa27.38■■□□□ 1.97
PER1-218ENST00000585095 CYB5RLQ6IPT4 315 aa27.28■■□□□ 1.96
PER1-218ENST00000585095 TOPBP1Q92547 1522 aa27.27■■□□□ 1.96
PER1-218ENST00000585095 EIF4G3O43432 1585 aaKnown RBP27.26■■□□□ 1.95
PER1-218ENST00000585095 CCDC88BA6NC98 1476 aa27.2■■□□□ 1.95
PER1-218ENST00000585095 ARAP1Q96P48 1450 aa27.2■■□□□ 1.95
PER1-218ENST00000585095 CHD1O14646 1710 aa27.19■■□□□ 1.94
PER1-218ENST00000585095 AQRO60306 1485 aaKnown RBP eCLIP27.13■■□□□ 1.93
PER1-218ENST00000585095 TARBP1Q13395 1621 aaKnown RBP27.13■■□□□ 1.93
PER1-218ENST00000585095 TRHP20396 242 aaPredicted RBP27.1■■□□□ 1.93
PER1-218ENST00000585095 DNMBPQ6XZF7 1577 aa27.09■■□□□ 1.93
PER1-218ENST00000585095 ABCC8Q09428 1581 aa27.08■■□□□ 1.93
PER1-218ENST00000585095 POLA1P09884 1462 aaPredicted RBP26.96■■□□□ 1.91
PER1-218ENST00000585095 FBLN2P98095 1184 aa26.96■■□□□ 1.91
PER1-218ENST00000585095 RAD54L2Q9Y4B4 1467 aa26.9■■□□□ 1.9
PER1-218ENST00000585095 CLASP1Q7Z460 1538 aa26.89■■□□□ 1.89
PER1-218ENST00000585095 TDRD9Q8NDG6 1382 aaKnown RBP26.84■■□□□ 1.89
PER1-218ENST00000585095 SNAPC4Q5SXM2 1469 aa26.8■■□□□ 1.88
PER1-218ENST00000585095 SOGA1O94964 1423 aa26.78■■□□□ 1.88
PER1-218ENST00000585095 AEBP2Q6ZN18 517 aaPredicted RBP26.71■■□□□ 1.87
PER1-218ENST00000585095 SYNJ1O43426 1573 aa26.71■■□□□ 1.87
PER1-218ENST00000585095 WDR97A6NE52 1622 aa26.7■■□□□ 1.86
PER1-218ENST00000585095 FGD5Q6ZNL6 1462 aa26.69■■□□□ 1.86
PER1-218ENST00000585095 MAGI1Q96QZ7 1491 aaPredicted RBP26.68■■□□□ 1.86
PER1-218ENST00000585095 CHMP7Q8WUX9 453 aaPredicted RBP26.66■■□□□ 1.86
PER1-218ENST00000585095 SYNJ2O15056 1496 aa26.62■■□□□ 1.85
PER1-218ENST00000585095 GRIN2BQ13224 1484 aa26.62■■□□□ 1.85
PER1-218ENST00000585095 CUX1P39880 1505 aa26.61■■□□□ 1.85
PER1-218ENST00000585095 GAPVD1Q14C86 1478 aa26.58■■□□□ 1.85
PER1-218ENST00000585095 PBRM1Q86U86 1689 aa26.5■■□□□ 1.83
PER1-218ENST00000585095 ERCC6L2Q5T890 1561 aa26.47■■□□□ 1.83
PER1-218ENST00000585095 ABCA5Q8WWZ7 1642 aa26.39■■□□□ 1.82
PER1-218ENST00000585095 ABCA10Q8WWZ4 1543 aa26.35■■□□□ 1.81
PER1-218ENST00000585095 GRIN2AQ12879 1464 aa26.3■■□□□ 1.8
PER1-218ENST00000585095 CEP170Q5SW79 1584 aa26.3■■□□□ 1.8
PER1-218ENST00000585095 NUP160Q12769 1436 aa26.27■■□□□ 1.8
PER1-218ENST00000585095 KIF13AQ9H1H9 1805 aa26.25■■□□□ 1.79
PER1-218ENST00000585095 SHROOM2Q13796 1616 aa26.25■■□□□ 1.79
PER1-218ENST00000585095 ADAMTS12P58397 1594 aa26.22■■□□□ 1.79
PER1-218ENST00000585095 FHAD1B1AJZ9 1412 aa26.07■■□□□ 1.76
PER1-218ENST00000585095 WRNQ14191 1432 aaPredicted RBP eCLIP26.06■■□□□ 1.76
PER1-218ENST00000585095 PRG4Q92954 1404 aaPredicted RBP26.02■■□□□ 1.76
PER1-218ENST00000585095 BIVM-ERCC5R4GMW8 1640 aa25.99■■□□□ 1.75
PER1-218ENST00000585095 ERICH3Q5RHP9 1530 aa25.98■■□□□ 1.75
PER1-218ENST00000585095 ABCC10Q5T3U5 1492 aa25.98■■□□□ 1.75
PER1-218ENST00000585095 TOP2BQ02880 1626 aa25.98■■□□□ 1.75
PER1-218ENST00000585095 FAM69CQ0P6D2 419 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 153.9 ms