RNA–Protein interactions for RNA: ENST00000585006.1

KRT23-209, Transcript of keratin 23, humanhuman

TSL 4

Gene KRT23, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT23-209ENST00000585006 NISCHQ9Y2I1 1504 aa24.15■■□□□ 1.46
KRT23-209ENST00000585006 ABCC9O60706 1549 aa21.86■■□□□ 1.09
KRT23-209ENST00000585006 CCDC180Q9P1Z9 1646 aa21.76■■□□□ 1.07
KRT23-209ENST00000585006 RB1CC1Q8TDY2 1594 aa20.76■□□□□ 0.91
KRT23-209ENST00000585006 DNAJC5BQ9UF47 199 aa20.61■□□□□ 0.89
KRT23-209ENST00000585006 NACADO15069 1562 aa20.57■□□□□ 0.88
KRT23-209ENST00000585006 DCAF8L2P0C7V8 631 aa20.48■□□□□ 0.87
KRT23-209ENST00000585006 UNC13AQ9UPW8 1703 aa20.38■□□□□ 0.85
KRT23-209ENST00000585006 PABPN1Q86U42 306 aaKnown RBP eCLIP20.34■□□□□ 0.85
KRT23-209ENST00000585006 MYO15BQ96JP2 1530 aa20.22■□□□□ 0.83
KRT23-209ENST00000585006 BICRAQ9NZM4 1560 aa20.15■□□□□ 0.82
KRT23-209ENST00000585006 ZCCHC6Q5VYS8 1495 aaKnown RBP19.99■□□□□ 0.79
KRT23-209ENST00000585006 DCAF1Q9Y4B6 1507 aa19.92■□□□□ 0.78
KRT23-209ENST00000585006 SCRIBQ14160 1630 aa19.84■□□□□ 0.77
KRT23-209ENST00000585006 SHROOM4Q9ULL8 1493 aa19.83■□□□□ 0.76
KRT23-209ENST00000585006 CC2D2AQ9P2K1 1620 aa19.76■□□□□ 0.75
KRT23-209ENST00000585006 CECR2Q9BXF3 1484 aa19.7■□□□□ 0.74
KRT23-209ENST00000585006 EIF4G1Q04637 1599 aaKnown RBP19.67■□□□□ 0.74
KRT23-209ENST00000585006 DNAJC5Q9H3Z4 198 aa19■□□□□ 0.63
KRT23-209ENST00000585006 NCAPD3P42695 1498 aa18.97■□□□□ 0.63
KRT23-209ENST00000585006 ATAD2BQ9ULI0 1458 aa18.91■□□□□ 0.62
KRT23-209ENST00000585006 ERCC6Q03468 1493 aa18.9■□□□□ 0.62
KRT23-209ENST00000585006 SMARCA4P51532 1647 aa18.89■□□□□ 0.61
KRT23-209ENST00000585006 CUX2O14529 1486 aa18.87■□□□□ 0.61
KRT23-209ENST00000585006 SMARCA2P51531 1590 aa18.86■□□□□ 0.61
KRT23-209ENST00000585006 HMGXB3Q12766 1538 aa18.84■□□□□ 0.61
KRT23-209ENST00000585006 BAZ1AQ9NRL2 1556 aaPredicted RBP18.76■□□□□ 0.59
KRT23-209ENST00000585006 NESP48681 1621 aa18.75■□□□□ 0.59
KRT23-209ENST00000585006 BAZ1BQ9UIG0 1483 aaKnown RBP18.73■□□□□ 0.59
KRT23-209ENST00000585006 PEG3Q9GZU2 1588 aa18.68■□□□□ 0.58
KRT23-209ENST00000585006 MROH2BQ7Z745 1585 aa18.62■□□□□ 0.57
KRT23-209ENST00000585006 THOC2Q8NI27 1593 aaKnown RBP18.59■□□□□ 0.57
KRT23-209ENST00000585006 LAMC3Q9Y6N6 1575 aa18.59■□□□□ 0.57
KRT23-209ENST00000585006 KIF21AQ7Z4S6 1674 aa18.56■□□□□ 0.56
KRT23-209ENST00000585006 PDS5BQ9NTI5 1447 aa18.48■□□□□ 0.55
KRT23-209ENST00000585006 WIZO95785 1651 aa18.43■□□□□ 0.54
KRT23-209ENST00000585006 CADPSQ9ULU8 1353 aa18.4■□□□□ 0.54
KRT23-209ENST00000585006 MRC2Q9UBG0 1479 aa18.33■□□□□ 0.53
KRT23-209ENST00000585006 WDR62O43379 1518 aa18.29■□□□□ 0.52
KRT23-209ENST00000585006 CEP164Q9UPV0 1460 aa18.23■□□□□ 0.51
KRT23-209ENST00000585006 FANCD2Q9BXW9 1451 aa18.2■□□□□ 0.5
KRT23-209ENST00000585006 RSF1Q96T23 1441 aaPredicted RBP18.17■□□□□ 0.5
KRT23-209ENST00000585006 CFTRP13569 1480 aa18.16■□□□□ 0.5
KRT23-209ENST00000585006 TRIM41Q8WV44 630 aa18.16■□□□□ 0.5
KRT23-209ENST00000585006 TOP2AP11388 1531 aaKnown RBP18.15■□□□□ 0.5
KRT23-209ENST00000585006 PRDM2Q13029 1718 aa18.08■□□□□ 0.48
KRT23-209ENST00000585006 URB2Q14146 1524 aaKnown RBP18.07■□□□□ 0.48
KRT23-209ENST00000585006 OSCARQ8IYS5 282 aa18■□□□□ 0.47
KRT23-209ENST00000585006 CCDC88BA6NC98 1476 aa17.95■□□□□ 0.46
KRT23-209ENST00000585006 IFT140Q96RY7 1462 aa17.87■□□□□ 0.45
KRT23-209ENST00000585006 ZNF608Q9ULD9 1512 aaPredicted RBP17.87■□□□□ 0.45
KRT23-209ENST00000585006 TOPBP1Q92547 1522 aa17.85■□□□□ 0.45
KRT23-209ENST00000585006 RIMBP3CA6NJZ7 1639 aa17.81■□□□□ 0.44
KRT23-209ENST00000585006 RIMBP3BA6NNM3 1639 aa17.81■□□□□ 0.44
KRT23-209ENST00000585006 RIMBP3Q9UFD9 1639 aa17.81■□□□□ 0.44
KRT23-209ENST00000585006 ABCC8Q09428 1581 aa17.79■□□□□ 0.44
KRT23-209ENST00000585006 EIF4G3O43432 1585 aaKnown RBP17.78■□□□□ 0.44
KRT23-209ENST00000585006 DNMBPQ6XZF7 1577 aa17.78■□□□□ 0.44
KRT23-209ENST00000585006 CHD1O14646 1710 aa17.72■□□□□ 0.43
KRT23-209ENST00000585006 ARHGEF11O15085 1522 aa17.72■□□□□ 0.43
KRT23-209ENST00000585006 TARBP1Q13395 1621 aaKnown RBP17.71■□□□□ 0.43
KRT23-209ENST00000585006 AQRO60306 1485 aaKnown RBP eCLIP17.69■□□□□ 0.42
KRT23-209ENST00000585006 POLA1P09884 1462 aaPredicted RBP17.66■□□□□ 0.42
KRT23-209ENST00000585006 FBLN2P98095 1184 aa17.62■□□□□ 0.41
KRT23-209ENST00000585006 CYB5RLQ6IPT4 315 aa17.61■□□□□ 0.41
KRT23-209ENST00000585006 RAD54L2Q9Y4B4 1467 aa17.61■□□□□ 0.41
KRT23-209ENST00000585006 SOGA1O94964 1423 aa17.57■□□□□ 0.4
KRT23-209ENST00000585006 TDRD9Q8NDG6 1382 aaKnown RBP17.56■□□□□ 0.4
KRT23-209ENST00000585006 FGD5Q6ZNL6 1462 aa17.53■□□□□ 0.4
KRT23-209ENST00000585006 ARAP1Q96P48 1450 aa17.53■□□□□ 0.4
KRT23-209ENST00000585006 WDR97A6NE52 1622 aa17.5■□□□□ 0.39
KRT23-209ENST00000585006 SNAPC4Q5SXM2 1469 aa17.5■□□□□ 0.39
KRT23-209ENST00000585006 CUX1P39880 1505 aa17.5■□□□□ 0.39
KRT23-209ENST00000585006 TRHP20396 242 aaPredicted RBP17.46■□□□□ 0.39
KRT23-209ENST00000585006 CHMP7Q8WUX9 453 aaPredicted RBP17.45■□□□□ 0.38
KRT23-209ENST00000585006 MAGI1Q96QZ7 1491 aaPredicted RBP17.44■□□□□ 0.38
KRT23-209ENST00000585006 SYNJ1O43426 1573 aa17.44■□□□□ 0.38
KRT23-209ENST00000585006 CLASP1Q7Z460 1538 aa17.43■□□□□ 0.38
KRT23-209ENST00000585006 GRIN2BQ13224 1484 aa17.43■□□□□ 0.38
KRT23-209ENST00000585006 PBRM1Q86U86 1689 aa17.42■□□□□ 0.38
KRT23-209ENST00000585006 SYNJ2O15056 1496 aa17.39■□□□□ 0.37
KRT23-209ENST00000585006 GAPVD1Q14C86 1478 aa17.37■□□□□ 0.37
KRT23-209ENST00000585006 SUPT5HO00267 1087 aaKnown RBP17.33■□□□□ 0.36
KRT23-209ENST00000585006 ABCA5Q8WWZ7 1642 aa17.32■□□□□ 0.36
KRT23-209ENST00000585006 ABCA10Q8WWZ4 1543 aa17.31■□□□□ 0.36
KRT23-209ENST00000585006 WRNQ14191 1432 aaPredicted RBP eCLIP17.22■□□□□ 0.35
KRT23-209ENST00000585006 GRIN2AQ12879 1464 aa17.21■□□□□ 0.35
KRT23-209ENST00000585006 BIVM-ERCC5R4GMW8 1640 aa17.21■□□□□ 0.35
KRT23-209ENST00000585006 ADAMTS12P58397 1594 aa17.2■□□□□ 0.34
KRT23-209ENST00000585006 TOP2BQ02880 1626 aa17.2■□□□□ 0.34
KRT23-209ENST00000585006 ERCC6L2Q5T890 1561 aa17.18■□□□□ 0.34
KRT23-209ENST00000585006 CEP170Q5SW79 1584 aa17.17■□□□□ 0.34
KRT23-209ENST00000585006 NUP160Q12769 1436 aa17.14■□□□□ 0.33
KRT23-209ENST00000585006 FHAD1B1AJZ9 1412 aa17.13■□□□□ 0.33
KRT23-209ENST00000585006 SHROOM2Q13796 1616 aa17.11■□□□□ 0.33
KRT23-209ENST00000585006 ERICH3Q5RHP9 1530 aa17.11■□□□□ 0.33
KRT23-209ENST00000585006 AEBP2Q6ZN18 517 aaPredicted RBP17.04■□□□□ 0.32
KRT23-209ENST00000585006 KIF13AQ9H1H9 1805 aa17.01■□□□□ 0.31
KRT23-209ENST00000585006 PRG4Q92954 1404 aaPredicted RBP17.01■□□□□ 0.31
KRT23-209ENST00000585006 JPH4Q96JJ6 628 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms