RNA–Protein interactions for RNA: ENST00000584995.5

SLC46A1-206, Transcript of solute carrier family 46 member 1, humanhuman

TSL 3

Gene SLC46A1, Length 1,030 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-206ENST00000584995 NISCHQ9Y2I1 1504 aa42.53■■■■■ 4.4
SLC46A1-206ENST00000584995 ABCC9O60706 1549 aa37.95■■■■□ 3.67
SLC46A1-206ENST00000584995 CCDC180Q9P1Z9 1646 aa37.88■■■■□ 3.65
SLC46A1-206ENST00000584995 DCAF8L2P0C7V8 631 aa36.13■■■■□ 3.37
SLC46A1-206ENST00000584995 RB1CC1Q8TDY2 1594 aa36.06■■■■□ 3.36
SLC46A1-206ENST00000584995 NACADO15069 1562 aa35.85■■■■□ 3.33
SLC46A1-206ENST00000584995 PABPN1Q86U42 306 aaKnown RBP eCLIP35.5■■■■□ 3.27
SLC46A1-206ENST00000584995 DNAJC5BQ9UF47 199 aa35.5■■■■□ 3.27
SLC46A1-206ENST00000584995 MYO15BQ96JP2 1530 aa35.37■■■■□ 3.25
SLC46A1-206ENST00000584995 ZCCHC6Q5VYS8 1495 aaKnown RBP35.25■■■■□ 3.23
SLC46A1-206ENST00000584995 UNC13AQ9UPW8 1703 aa35.16■■■■□ 3.22
SLC46A1-206ENST00000584995 DCAF1Q9Y4B6 1507 aa35.03■■■■□ 3.2
SLC46A1-206ENST00000584995 BICRAQ9NZM4 1560 aa35.03■■■■□ 3.2
SLC46A1-206ENST00000584995 SCRIBQ14160 1630 aa34.73■■■■□ 3.15
SLC46A1-206ENST00000584995 SHROOM4Q9ULL8 1493 aa34.44■■■■□ 3.1
SLC46A1-206ENST00000584995 CC2D2AQ9P2K1 1620 aa34.18■■■■□ 3.06
SLC46A1-206ENST00000584995 EIF4G1Q04637 1599 aaKnown RBP34.15■■■■□ 3.06
SLC46A1-206ENST00000584995 CECR2Q9BXF3 1484 aa34.12■■■■□ 3.05
SLC46A1-206ENST00000584995 NCAPD3P42695 1498 aa33.17■■■□□ 2.9
SLC46A1-206ENST00000584995 ATAD2BQ9ULI0 1458 aa33.12■■■□□ 2.89
SLC46A1-206ENST00000584995 SMARCA4P51532 1647 aa33.08■■■□□ 2.89
SLC46A1-206ENST00000584995 SMARCA2P51531 1590 aa32.97■■■□□ 2.87
SLC46A1-206ENST00000584995 BAZ1AQ9NRL2 1556 aaPredicted RBP32.96■■■□□ 2.87
SLC46A1-206ENST00000584995 HMGXB3Q12766 1538 aa32.85■■■□□ 2.85
SLC46A1-206ENST00000584995 MROH2BQ7Z745 1585 aa32.82■■■□□ 2.84
SLC46A1-206ENST00000584995 BAZ1BQ9UIG0 1483 aaKnown RBP32.81■■■□□ 2.84
SLC46A1-206ENST00000584995 ERCC6Q03468 1493 aa32.72■■■□□ 2.83
SLC46A1-206ENST00000584995 PEG3Q9GZU2 1588 aa32.69■■■□□ 2.82
SLC46A1-206ENST00000584995 NESP48681 1621 aa32.66■■■□□ 2.82
SLC46A1-206ENST00000584995 CUX2O14529 1486 aa32.46■■■□□ 2.79
SLC46A1-206ENST00000584995 WIZO95785 1651 aa32.41■■■□□ 2.78
SLC46A1-206ENST00000584995 DNAJC5Q9H3Z4 198 aa32.35■■■□□ 2.77
SLC46A1-206ENST00000584995 LAMC3Q9Y6N6 1575 aa32.31■■■□□ 2.76
SLC46A1-206ENST00000584995 RSF1Q96T23 1441 aaPredicted RBP32.25■■■□□ 2.75
SLC46A1-206ENST00000584995 CADPSQ9ULU8 1353 aa32.23■■■□□ 2.75
SLC46A1-206ENST00000584995 PDS5BQ9NTI5 1447 aa32.22■■■□□ 2.75
SLC46A1-206ENST00000584995 THOC2Q8NI27 1593 aaKnown RBP32.11■■■□□ 2.73
SLC46A1-206ENST00000584995 KIF21AQ7Z4S6 1674 aa32.1■■■□□ 2.73
SLC46A1-206ENST00000584995 TOP2AP11388 1531 aaKnown RBP31.97■■■□□ 2.71
SLC46A1-206ENST00000584995 MRC2Q9UBG0 1479 aa31.9■■■□□ 2.7
SLC46A1-206ENST00000584995 CFTRP13569 1480 aa31.85■■■□□ 2.69
SLC46A1-206ENST00000584995 FANCD2Q9BXW9 1451 aa31.84■■■□□ 2.69
SLC46A1-206ENST00000584995 CEP164Q9UPV0 1460 aa31.82■■■□□ 2.68
SLC46A1-206ENST00000584995 WDR62O43379 1518 aa31.76■■■□□ 2.68
SLC46A1-206ENST00000584995 CCDC88BA6NC98 1476 aa31.71■■■□□ 2.67
SLC46A1-206ENST00000584995 URB2Q14146 1524 aaKnown RBP31.56■■■□□ 2.64
SLC46A1-206ENST00000584995 PRDM2Q13029 1718 aa31.33■■■□□ 2.61
SLC46A1-206ENST00000584995 TOPBP1Q92547 1522 aa31.24■■■□□ 2.59
SLC46A1-206ENST00000584995 SUPT5HO00267 1087 aaKnown RBP31.21■■■□□ 2.59
SLC46A1-206ENST00000584995 OSCARQ8IYS5 282 aa31.21■■■□□ 2.59
SLC46A1-206ENST00000584995 IFT140Q96RY7 1462 aa31.18■■■□□ 2.58
SLC46A1-206ENST00000584995 ZNF608Q9ULD9 1512 aaPredicted RBP31.18■■■□□ 2.58
SLC46A1-206ENST00000584995 TRIM41Q8WV44 630 aa31.16■■■□□ 2.58
SLC46A1-206ENST00000584995 ABCC8Q09428 1581 aa31.14■■■□□ 2.58
SLC46A1-206ENST00000584995 DNMBPQ6XZF7 1577 aa31.09■■■□□ 2.57
SLC46A1-206ENST00000584995 AQRO60306 1485 aaKnown RBP eCLIP30.97■■■□□ 2.55
SLC46A1-206ENST00000584995 POLA1P09884 1462 aaPredicted RBP30.95■■■□□ 2.54
SLC46A1-206ENST00000584995 RAD54L2Q9Y4B4 1467 aa30.92■■■□□ 2.54
SLC46A1-206ENST00000584995 EIF4G3O43432 1585 aaKnown RBP30.9■■■□□ 2.54
SLC46A1-206ENST00000584995 TARBP1Q13395 1621 aaKnown RBP30.89■■■□□ 2.54
SLC46A1-206ENST00000584995 SOGA1O94964 1423 aa30.89■■■□□ 2.53
SLC46A1-206ENST00000584995 TDRD9Q8NDG6 1382 aaKnown RBP30.85■■■□□ 2.53
SLC46A1-206ENST00000584995 FBLN2P98095 1184 aa30.84■■■□□ 2.53
SLC46A1-206ENST00000584995 FGD5Q6ZNL6 1462 aa30.81■■■□□ 2.52
SLC46A1-206ENST00000584995 CUX1P39880 1505 aa30.8■■■□□ 2.52
SLC46A1-206ENST00000584995 RIMBP3CA6NJZ7 1639 aa30.62■■■□□ 2.49
SLC46A1-206ENST00000584995 RIMBP3BA6NNM3 1639 aa30.62■■■□□ 2.49
SLC46A1-206ENST00000584995 RIMBP3Q9UFD9 1639 aa30.62■■■□□ 2.49
SLC46A1-206ENST00000584995 CHD1O14646 1710 aa30.6■■■□□ 2.49
SLC46A1-206ENST00000584995 SNAPC4Q5SXM2 1469 aa30.59■■■□□ 2.49
SLC46A1-206ENST00000584995 CHMP7Q8WUX9 453 aaPredicted RBP30.58■■■□□ 2.49
SLC46A1-206ENST00000584995 ARHGEF11O15085 1522 aa30.57■■■□□ 2.49
SLC46A1-206ENST00000584995 CYB5RLQ6IPT4 315 aa30.53■■■□□ 2.48
SLC46A1-206ENST00000584995 GRIN2BQ13224 1484 aa30.51■■■□□ 2.48
SLC46A1-206ENST00000584995 WDR97A6NE52 1622 aa30.47■■■□□ 2.47
SLC46A1-206ENST00000584995 GAPVD1Q14C86 1478 aa30.46■■■□□ 2.47
SLC46A1-206ENST00000584995 MAGI1Q96QZ7 1491 aaPredicted RBP30.44■■■□□ 2.46
SLC46A1-206ENST00000584995 ABCA10Q8WWZ4 1543 aa30.42■■■□□ 2.46
SLC46A1-206ENST00000584995 WRNQ14191 1432 aaPredicted RBP eCLIP30.41■■■□□ 2.46
SLC46A1-206ENST00000584995 SYNJ2O15056 1496 aa30.38■■■□□ 2.45
SLC46A1-206ENST00000584995 SYNJ1O43426 1573 aa30.32■■■□□ 2.45
SLC46A1-206ENST00000584995 ARAP1Q96P48 1450 aa30.31■■■□□ 2.44
SLC46A1-206ENST00000584995 TOP2BQ02880 1626 aa30.3■■■□□ 2.44
SLC46A1-206ENST00000584995 PBRM1Q86U86 1689 aa30.3■■■□□ 2.44
SLC46A1-206ENST00000584995 ABCA5Q8WWZ7 1642 aa30.29■■■□□ 2.44
SLC46A1-206ENST00000584995 CLASP1Q7Z460 1538 aa30.27■■■□□ 2.44
SLC46A1-206ENST00000584995 BIVM-ERCC5R4GMW8 1640 aa30.25■■■□□ 2.43
SLC46A1-206ENST00000584995 TRHP20396 242 aaPredicted RBP30.14■■■□□ 2.42
SLC46A1-206ENST00000584995 GRIN2AQ12879 1464 aa30.12■■■□□ 2.41
SLC46A1-206ENST00000584995 FHAD1B1AJZ9 1412 aa30.07■■■□□ 2.4
SLC46A1-206ENST00000584995 ADAMTS12P58397 1594 aa30.07■■■□□ 2.4
SLC46A1-206ENST00000584995 ERICH3Q5RHP9 1530 aa30.01■■■□□ 2.39
SLC46A1-206ENST00000584995 NUP160Q12769 1436 aa29.99■■■□□ 2.39
SLC46A1-206ENST00000584995 CEP170Q5SW79 1584 aa29.98■■■□□ 2.39
SLC46A1-206ENST00000584995 ERCC6L2Q5T890 1561 aa29.93■■■□□ 2.38
SLC46A1-206ENST00000584995 IGF1RP08069 1367 aa29.83■■■□□ 2.37
SLC46A1-206ENST00000584995 JPH4Q96JJ6 628 aa29.83■■■□□ 2.37
SLC46A1-206ENST00000584995 KIF27Q86VH2 1401 aa29.82■■■□□ 2.36
SLC46A1-206ENST00000584995 PRG4Q92954 1404 aaPredicted RBP29.78■■■□□ 2.36
SLC46A1-206ENST00000584995 SHROOM2Q13796 1616 aa29.75■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms