RNA–Protein interactions for RNA: ENST00000584866.1

NDEL1-218, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5

Gene NDEL1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-218ENST00000584866 NISCHQ9Y2I1 1504 aa48.35■■■■■ 5.33
NDEL1-218ENST00000584866 CCDC180Q9P1Z9 1646 aa43.04■■■■■ 4.48
NDEL1-218ENST00000584866 ABCC9O60706 1549 aa42.46■■■■■ 4.39
NDEL1-218ENST00000584866 RB1CC1Q8TDY2 1594 aa40.67■■■■■ 4.1
NDEL1-218ENST00000584866 NACADO15069 1562 aa40.58■■■■■ 4.09
NDEL1-218ENST00000584866 DCAF8L2P0C7V8 631 aa40.53■■■■■ 4.08
NDEL1-218ENST00000584866 MYO15BQ96JP2 1530 aa40.26■■■■■ 4.03
NDEL1-218ENST00000584866 ZCCHC6Q5VYS8 1495 aaKnown RBP40.19■■■■■ 4.03
NDEL1-218ENST00000584866 DCAF1Q9Y4B6 1507 aa39.97■■■■□ 3.99
NDEL1-218ENST00000584866 UNC13AQ9UPW8 1703 aa39.74■■■■□ 3.95
NDEL1-218ENST00000584866 PABPN1Q86U42 306 aaKnown RBP eCLIP39.67■■■■□ 3.94
NDEL1-218ENST00000584866 BICRAQ9NZM4 1560 aa39.51■■■■□ 3.92
NDEL1-218ENST00000584866 DNAJC5BQ9UF47 199 aa39.35■■■■□ 3.89
NDEL1-218ENST00000584866 SCRIBQ14160 1630 aa39.26■■■■□ 3.88
NDEL1-218ENST00000584866 SHROOM4Q9ULL8 1493 aa39■■■■□ 3.83
NDEL1-218ENST00000584866 EIF4G1Q04637 1599 aaKnown RBP38.46■■■■□ 3.75
NDEL1-218ENST00000584866 CC2D2AQ9P2K1 1620 aa38.38■■■■□ 3.73
NDEL1-218ENST00000584866 CECR2Q9BXF3 1484 aa38.18■■■■□ 3.7
NDEL1-218ENST00000584866 SMARCA4P51532 1647 aa37.54■■■■□ 3.6
NDEL1-218ENST00000584866 NCAPD3P42695 1498 aa37.49■■■■□ 3.59
NDEL1-218ENST00000584866 ATAD2BQ9ULI0 1458 aa37.46■■■■□ 3.59
NDEL1-218ENST00000584866 BAZ1AQ9NRL2 1556 aaPredicted RBP37.45■■■■□ 3.59
NDEL1-218ENST00000584866 SMARCA2P51531 1590 aa37.34■■■■□ 3.57
NDEL1-218ENST00000584866 MROH2BQ7Z745 1585 aa37.26■■■■□ 3.56
NDEL1-218ENST00000584866 HMGXB3Q12766 1538 aa37.22■■■■□ 3.55
NDEL1-218ENST00000584866 PEG3Q9GZU2 1588 aa37.2■■■■□ 3.55
NDEL1-218ENST00000584866 BAZ1BQ9UIG0 1483 aaKnown RBP37.08■■■■□ 3.53
NDEL1-218ENST00000584866 WIZO95785 1651 aa36.82■■■■□ 3.48
NDEL1-218ENST00000584866 RSF1Q96T23 1441 aaPredicted RBP36.75■■■■□ 3.47
NDEL1-218ENST00000584866 NESP48681 1621 aa36.67■■■■□ 3.46
NDEL1-218ENST00000584866 ERCC6Q03468 1493 aa36.57■■■■□ 3.45
NDEL1-218ENST00000584866 LAMC3Q9Y6N6 1575 aa36.49■■■■□ 3.43
NDEL1-218ENST00000584866 TOP2AP11388 1531 aaKnown RBP36.39■■■■□ 3.42
NDEL1-218ENST00000584866 CADPSQ9ULU8 1353 aa36.39■■■■□ 3.42
NDEL1-218ENST00000584866 CUX2O14529 1486 aa36.32■■■■□ 3.41
NDEL1-218ENST00000584866 PDS5BQ9NTI5 1447 aa36.28■■■■□ 3.4
NDEL1-218ENST00000584866 KIF21AQ7Z4S6 1674 aa36.17■■■■□ 3.38
NDEL1-218ENST00000584866 THOC2Q8NI27 1593 aaKnown RBP36.14■■■■□ 3.38
NDEL1-218ENST00000584866 CFTRP13569 1480 aa36.1■■■■□ 3.37
NDEL1-218ENST00000584866 CCDC88BA6NC98 1476 aa36.02■■■■□ 3.36
NDEL1-218ENST00000584866 FANCD2Q9BXW9 1451 aa35.92■■■■□ 3.34
NDEL1-218ENST00000584866 MRC2Q9UBG0 1479 aa35.92■■■■□ 3.34
NDEL1-218ENST00000584866 CEP164Q9UPV0 1460 aa35.89■■■■□ 3.34
NDEL1-218ENST00000584866 WDR62O43379 1518 aa35.81■■■■□ 3.32
NDEL1-218ENST00000584866 PRDM2Q13029 1718 aa35.7■■■■□ 3.31
NDEL1-218ENST00000584866 DNAJC5Q9H3Z4 198 aa35.63■■■■□ 3.29
NDEL1-218ENST00000584866 URB2Q14146 1524 aaKnown RBP35.61■■■■□ 3.29
NDEL1-218ENST00000584866 SUPT5HO00267 1087 aaKnown RBP35.58■■■■□ 3.29
NDEL1-218ENST00000584866 TOPBP1Q92547 1522 aa35.33■■■■□ 3.25
NDEL1-218ENST00000584866 ABCC8Q09428 1581 aa35.3■■■■□ 3.24
NDEL1-218ENST00000584866 DNMBPQ6XZF7 1577 aa35.24■■■■□ 3.23
NDEL1-218ENST00000584866 IFT140Q96RY7 1462 aa35.17■■■■□ 3.22
NDEL1-218ENST00000584866 ZNF608Q9ULD9 1512 aaPredicted RBP35.06■■■■□ 3.2
NDEL1-218ENST00000584866 POLA1P09884 1462 aaPredicted RBP35.02■■■■□ 3.2
NDEL1-218ENST00000584866 CUX1P39880 1505 aa34.96■■■■□ 3.19
NDEL1-218ENST00000584866 TARBP1Q13395 1621 aaKnown RBP34.96■■■■□ 3.19
NDEL1-218ENST00000584866 RAD54L2Q9Y4B4 1467 aa34.89■■■■□ 3.18
NDEL1-218ENST00000584866 FGD5Q6ZNL6 1462 aa34.88■■■■□ 3.17
NDEL1-218ENST00000584866 SOGA1O94964 1423 aa34.88■■■■□ 3.17
NDEL1-218ENST00000584866 EIF4G3O43432 1585 aaKnown RBP34.85■■■■□ 3.17
NDEL1-218ENST00000584866 AQRO60306 1485 aaKnown RBP eCLIP34.84■■■■□ 3.176e-9■■■■□ 20
NDEL1-218ENST00000584866 OSCARQ8IYS5 282 aa34.81■■■■□ 3.16
NDEL1-218ENST00000584866 TDRD9Q8NDG6 1382 aaKnown RBP34.73■■■■□ 3.15
NDEL1-218ENST00000584866 WDR97A6NE52 1622 aa34.63■■■■□ 3.13
NDEL1-218ENST00000584866 WRNQ14191 1432 aaPredicted RBP eCLIP34.62■■■■□ 3.13
NDEL1-218ENST00000584866 TOP2BQ02880 1626 aa34.55■■■■□ 3.12
NDEL1-218ENST00000584866 BIVM-ERCC5R4GMW8 1640 aa34.55■■■■□ 3.12
NDEL1-218ENST00000584866 SYNJ1O43426 1573 aa34.53■■■■□ 3.12
NDEL1-218ENST00000584866 ABCA10Q8WWZ4 1543 aa34.53■■■■□ 3.12
NDEL1-218ENST00000584866 GRIN2BQ13224 1484 aa34.48■■■■□ 3.11
NDEL1-218ENST00000584866 SNAPC4Q5SXM2 1469 aa34.47■■■■□ 3.11
NDEL1-218ENST00000584866 CHD1O14646 1710 aa34.47■■■■□ 3.11
NDEL1-218ENST00000584866 FBLN2P98095 1184 aa34.46■■■■□ 3.11
NDEL1-218ENST00000584866 GAPVD1Q14C86 1478 aa34.46■■■■□ 3.11
NDEL1-218ENST00000584866 MAGI1Q96QZ7 1491 aaPredicted RBP34.41■■■■□ 3.1
NDEL1-218ENST00000584866 ABCA5Q8WWZ7 1642 aa34.39■■■■□ 3.1
NDEL1-218ENST00000584866 PBRM1Q86U86 1689 aa34.34■■■■□ 3.09
NDEL1-218ENST00000584866 CHMP7Q8WUX9 453 aaPredicted RBP34.33■■■■□ 3.09
NDEL1-218ENST00000584866 SYNJ2O15056 1496 aa34.29■■■■□ 3.08
NDEL1-218ENST00000584866 TRIM41Q8WV44 630 aa34.29■■■■□ 3.08
NDEL1-218ENST00000584866 RIMBP3CA6NJZ7 1639 aa34.23■■■■□ 3.07
NDEL1-218ENST00000584866 RIMBP3BA6NNM3 1639 aa34.23■■■■□ 3.07
NDEL1-218ENST00000584866 RIMBP3Q9UFD9 1639 aa34.23■■■■□ 3.07
NDEL1-218ENST00000584866 ARHGEF11O15085 1522 aa34.2■■■■□ 3.07
NDEL1-218ENST00000584866 CLASP1Q7Z460 1538 aa34.13■■■■□ 3.05
NDEL1-218ENST00000584866 ERICH3Q5RHP9 1530 aa34.1■■■■□ 3.05
NDEL1-218ENST00000584866 ADAMTS12P58397 1594 aa34.07■■■■□ 3.05
NDEL1-218ENST00000584866 FHAD1B1AJZ9 1412 aa34.04■■■■□ 3.04
NDEL1-218ENST00000584866 GRIN2AQ12879 1464 aa34.03■■■■□ 3.04
NDEL1-218ENST00000584866 CYB5RLQ6IPT4 315 aa33.96■■■■□ 3.03
NDEL1-218ENST00000584866 NUP160Q12769 1436 aa33.93■■■■□ 3.02
NDEL1-218ENST00000584866 ARAP1Q96P48 1450 aa33.93■■■■□ 3.02
NDEL1-218ENST00000584866 KIF27Q86VH2 1401 aa33.92■■■■□ 3.02
NDEL1-218ENST00000584866 CEP170Q5SW79 1584 aa33.88■■■■□ 3.01
NDEL1-218ENST00000584866 IGF1RP08069 1367 aa33.87■■■■□ 3.01
NDEL1-218ENST00000584866 CUL7Q14999 1698 aa33.69■■■□□ 2.98
NDEL1-218ENST00000584866 SHROOM2Q13796 1616 aa33.67■■■□□ 2.98
NDEL1-218ENST00000584866 ERCC6L2Q5T890 1561 aa33.66■■■□□ 2.98
NDEL1-218ENST00000584866 CARMIL1Q5VZK9 1371 aa33.64■■■□□ 2.98
NDEL1-218ENST00000584866 JPH4Q96JJ6 628 aa33.61■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms