RNA–Protein interactions for RNA: ENST00000584842.1

CTC1-213, Transcript of CST telomere replication complex component 1, humanhuman

TSL 3

Gene CTC1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-213ENST00000584842 NISCHQ9Y2I1 1504 aa19.41■□□□□ 0.7
CTC1-213ENST00000584842 CCDC180Q9P1Z9 1646 aa17.38■□□□□ 0.37
CTC1-213ENST00000584842 ABCC9O60706 1549 aa16.94■□□□□ 0.3
CTC1-213ENST00000584842 RB1CC1Q8TDY2 1594 aa16.35■□□□□ 0.21
CTC1-213ENST00000584842 NACADO15069 1562 aa16.3■□□□□ 0.2
CTC1-213ENST00000584842 DCAF8L2P0C7V8 631 aa16.2■□□□□ 0.18
CTC1-213ENST00000584842 ZCCHC6Q5VYS8 1495 aaKnown RBP16.17■□□□□ 0.18
CTC1-213ENST00000584842 MYO15BQ96JP2 1530 aa16.17■□□□□ 0.18
CTC1-213ENST00000584842 DCAF1Q9Y4B6 1507 aa16.09■□□□□ 0.17
CTC1-213ENST00000584842 UNC13AQ9UPW8 1703 aa15.99■□□□□ 0.15
CTC1-213ENST00000584842 SCRIBQ14160 1630 aa15.8■□□□□ 0.12
CTC1-213ENST00000584842 BICRAQ9NZM4 1560 aa15.77■□□□□ 0.11
CTC1-213ENST00000584842 PABPN1Q86U42 306 aaKnown RBP eCLIP15.75■□□□□ 0.11
CTC1-213ENST00000584842 SHROOM4Q9ULL8 1493 aa15.7■□□□□ 0.1
CTC1-213ENST00000584842 DNAJC5BQ9UF47 199 aa15.44■□□□□ 0.06
CTC1-213ENST00000584842 EIF4G1Q04637 1599 aaKnown RBP15.4■□□□□ 0.06
CTC1-213ENST00000584842 CC2D2AQ9P2K1 1620 aa15.35■□□□□ 0.05
CTC1-213ENST00000584842 CECR2Q9BXF3 1484 aa15.23■□□□□ 0.03
CTC1-213ENST00000584842 SMARCA4P51532 1647 aa15.1■□□□□ 0.01
CTC1-213ENST00000584842 BAZ1AQ9NRL2 1556 aaPredicted RBP15.1■□□□□ 0.01
CTC1-213ENST00000584842 SMARCA2P51531 1590 aa15.03■□□□□ -0
CTC1-213ENST00000584842 ATAD2BQ9ULI0 1458 aa14.98□□□□□ -0.01
CTC1-213ENST00000584842 NCAPD3P42695 1498 aa14.97□□□□□ -0.01
CTC1-213ENST00000584842 HMGXB3Q12766 1538 aa14.97□□□□□ -0.01
CTC1-213ENST00000584842 PEG3Q9GZU2 1588 aa14.95□□□□□ -0.02
CTC1-213ENST00000584842 MROH2BQ7Z745 1585 aa14.94□□□□□ -0.02
CTC1-213ENST00000584842 BAZ1BQ9UIG0 1483 aaKnown RBP14.91□□□□□ -0.02
CTC1-213ENST00000584842 WIZO95785 1651 aa14.81□□□□□ -0.04
CTC1-213ENST00000584842 RSF1Q96T23 1441 aaPredicted RBP14.73□□□□□ -0.05
CTC1-213ENST00000584842 TOP2AP11388 1531 aaKnown RBP14.68□□□□□ -0.06
CTC1-213ENST00000584842 ERCC6Q03468 1493 aa14.67□□□□□ -0.06
CTC1-213ENST00000584842 LAMC3Q9Y6N6 1575 aa14.66□□□□□ -0.06
CTC1-213ENST00000584842 NESP48681 1621 aa14.62□□□□□ -0.07
CTC1-213ENST00000584842 CADPSQ9ULU8 1353 aa14.54□□□□□ -0.08
CTC1-213ENST00000584842 PDS5BQ9NTI5 1447 aa14.54□□□□□ -0.08
CTC1-213ENST00000584842 KIF21AQ7Z4S6 1674 aa14.54□□□□□ -0.08
CTC1-213ENST00000584842 CUX2O14529 1486 aa14.5□□□□□ -0.09
CTC1-213ENST00000584842 PRDM2Q13029 1718 aa14.49□□□□□ -0.09
CTC1-213ENST00000584842 THOC2Q8NI27 1593 aaKnown RBP14.47□□□□□ -0.09
CTC1-213ENST00000584842 CFTRP13569 1480 aa14.45□□□□□ -0.1
CTC1-213ENST00000584842 CCDC88BA6NC98 1476 aa14.44□□□□□ -0.1
CTC1-213ENST00000584842 CEP164Q9UPV0 1460 aa14.42□□□□□ -0.1
CTC1-213ENST00000584842 FANCD2Q9BXW9 1451 aa14.4□□□□□ -0.1
CTC1-213ENST00000584842 MRC2Q9UBG0 1479 aa14.39□□□□□ -0.11
CTC1-213ENST00000584842 WDR62O43379 1518 aa14.35□□□□□ -0.11
CTC1-213ENST00000584842 SUPT5HO00267 1087 aaKnown RBP14.33□□□□□ -0.12
CTC1-213ENST00000584842 URB2Q14146 1524 aaKnown RBP14.24□□□□□ -0.13
CTC1-213ENST00000584842 ABCC8Q09428 1581 aa14.21□□□□□ -0.14
CTC1-213ENST00000584842 DNMBPQ6XZF7 1577 aa14.18□□□□□ -0.14
CTC1-213ENST00000584842 TOPBP1Q92547 1522 aa14.17□□□□□ -0.14
CTC1-213ENST00000584842 IFT140Q96RY7 1462 aa14.11□□□□□ -0.15
CTC1-213ENST00000584842 POLA1P09884 1462 aaPredicted RBP14.04□□□□□ -0.16
CTC1-213ENST00000584842 CUX1P39880 1505 aa14.03□□□□□ -0.16
CTC1-213ENST00000584842 TARBP1Q13395 1621 aaKnown RBP14.02□□□□□ -0.16
CTC1-213ENST00000584842 EIF4G3O43432 1585 aaKnown RBP14.02□□□□□ -0.16
CTC1-213ENST00000584842 DNAJC5Q9H3Z4 198 aa14.01□□□□□ -0.17
CTC1-213ENST00000584842 FGD5Q6ZNL6 1462 aa14□□□□□ -0.17
CTC1-213ENST00000584842 WDR97A6NE52 1622 aa13.99□□□□□ -0.17
CTC1-213ENST00000584842 ZNF608Q9ULD9 1512 aaPredicted RBP13.99□□□□□ -0.17
CTC1-213ENST00000584842 SOGA1O94964 1423 aa13.97□□□□□ -0.17
CTC1-213ENST00000584842 BIVM-ERCC5R4GMW8 1640 aa13.96□□□□□ -0.17
CTC1-213ENST00000584842 RAD54L2Q9Y4B4 1467 aa13.94□□□□□ -0.18
CTC1-213ENST00000584842 TOP2BQ02880 1626 aa13.94□□□□□ -0.18
CTC1-213ENST00000584842 WRNQ14191 1432 aaPredicted RBP eCLIP13.94□□□□□ -0.18
CTC1-213ENST00000584842 SYNJ1O43426 1573 aa13.91□□□□□ -0.18
CTC1-213ENST00000584842 AQRO60306 1485 aaKnown RBP eCLIP13.9□□□□□ -0.18
CTC1-213ENST00000584842 PBRM1Q86U86 1689 aa13.88□□□□□ -0.19
CTC1-213ENST00000584842 CHD1O14646 1710 aa13.87□□□□□ -0.19
CTC1-213ENST00000584842 ABCA10Q8WWZ4 1543 aa13.87□□□□□ -0.19
CTC1-213ENST00000584842 TDRD9Q8NDG6 1382 aaKnown RBP13.86□□□□□ -0.19
CTC1-213ENST00000584842 ABCA5Q8WWZ7 1642 aa13.85□□□□□ -0.19
CTC1-213ENST00000584842 OSCARQ8IYS5 282 aa13.84□□□□□ -0.19
CTC1-213ENST00000584842 GRIN2BQ13224 1484 aa13.84□□□□□ -0.19
CTC1-213ENST00000584842 MAGI1Q96QZ7 1491 aaPredicted RBP13.83□□□□□ -0.2
CTC1-213ENST00000584842 GAPVD1Q14C86 1478 aa13.82□□□□□ -0.2
CTC1-213ENST00000584842 SNAPC4Q5SXM2 1469 aa13.82□□□□□ -0.2
CTC1-213ENST00000584842 FBLN2P98095 1184 aa13.77□□□□□ -0.21
CTC1-213ENST00000584842 SYNJ2O15056 1496 aa13.76□□□□□ -0.21
CTC1-213ENST00000584842 CHMP7Q8WUX9 453 aaPredicted RBP13.73□□□□□ -0.21
CTC1-213ENST00000584842 ADAMTS12P58397 1594 aa13.73□□□□□ -0.21
CTC1-213ENST00000584842 ERICH3Q5RHP9 1530 aa13.73□□□□□ -0.21
CTC1-213ENST00000584842 RIMBP3CA6NJZ7 1639 aa13.68□□□□□ -0.22
CTC1-213ENST00000584842 RIMBP3BA6NNM3 1639 aa13.68□□□□□ -0.22
CTC1-213ENST00000584842 RIMBP3Q9UFD9 1639 aa13.68□□□□□ -0.22
CTC1-213ENST00000584842 FHAD1B1AJZ9 1412 aa13.67□□□□□ -0.22
CTC1-213ENST00000584842 KIF27Q86VH2 1401 aa13.67□□□□□ -0.22
CTC1-213ENST00000584842 CLASP1Q7Z460 1538 aa13.66□□□□□ -0.22
CTC1-213ENST00000584842 GRIN2AQ12879 1464 aa13.66□□□□□ -0.22
CTC1-213ENST00000584842 ARHGEF11O15085 1522 aa13.65□□□□□ -0.22
CTC1-213ENST00000584842 CUL7Q14999 1698 aa13.65□□□□□ -0.22
CTC1-213ENST00000584842 CEP170Q5SW79 1584 aa13.59□□□□□ -0.23
CTC1-213ENST00000584842 NUP160Q12769 1436 aa13.57□□□□□ -0.24
CTC1-213ENST00000584842 TRIM41Q8WV44 630 aa13.57□□□□□ -0.24
CTC1-213ENST00000584842 IGF1RP08069 1367 aa13.54□□□□□ -0.24
CTC1-213ENST00000584842 RUSC2Q8N2Y8 1516 aa13.53□□□□□ -0.24
CTC1-213ENST00000584842 ARAP1Q96P48 1450 aa13.52□□□□□ -0.25
CTC1-213ENST00000584842 SHROOM2Q13796 1616 aa13.52□□□□□ -0.25
CTC1-213ENST00000584842 CARMIL1Q5VZK9 1371 aa13.49□□□□□ -0.25
CTC1-213ENST00000584842 CYB5RLQ6IPT4 315 aa13.47□□□□□ -0.25
CTC1-213ENST00000584842 KIAA0586Q9BVV6 1533 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms