RNA–Protein interactions for RNA: ENST00000584555.2

RN7SL616P-201, Transcript of RNA, 7SL, cytoplasmic 616, pseudogene, humanhuman

BASIC

Gene RN7SL616P, Length 269 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL616P-201ENST00000584555 NISCHQ9Y2I1 1504 aa26.64■■□□□ 1.85
RN7SL616P-201ENST00000584555 CCDC180Q9P1Z9 1646 aa23.85■■□□□ 1.41
RN7SL616P-201ENST00000584555 ABCC9O60706 1549 aa23.68■■□□□ 1.38
RN7SL616P-201ENST00000584555 RB1CC1Q8TDY2 1594 aa22.6■■□□□ 1.21
RN7SL616P-201ENST00000584555 NACADO15069 1562 aa22.49■■□□□ 1.19
RN7SL616P-201ENST00000584555 DCAF8L2P0C7V8 631 aa22.3■■□□□ 1.16
RN7SL616P-201ENST00000584555 MYO15BQ96JP2 1530 aa22.26■■□□□ 1.15
RN7SL616P-201ENST00000584555 UNC13AQ9UPW8 1703 aa22.19■■□□□ 1.14
RN7SL616P-201ENST00000584555 DNAJC5BQ9UF47 199 aa22.13■■□□□ 1.13
RN7SL616P-201ENST00000584555 ZCCHC6Q5VYS8 1495 aaKnown RBP22.11■■□□□ 1.13
RN7SL616P-201ENST00000584555 PABPN1Q86U42 306 aaKnown RBP eCLIP22.05■■□□□ 1.12
RN7SL616P-201ENST00000584555 DCAF1Q9Y4B6 1507 aa22.02■■□□□ 1.12
RN7SL616P-201ENST00000584555 BICRAQ9NZM4 1560 aa22.01■■□□□ 1.11
RN7SL616P-201ENST00000584555 SCRIBQ14160 1630 aa21.72■■□□□ 1.07
RN7SL616P-201ENST00000584555 SHROOM4Q9ULL8 1493 aa21.66■■□□□ 1.06
RN7SL616P-201ENST00000584555 CC2D2AQ9P2K1 1620 aa21.43■■□□□ 1.02
RN7SL616P-201ENST00000584555 EIF4G1Q04637 1599 aaKnown RBP21.42■■□□□ 1.02
RN7SL616P-201ENST00000584555 CECR2Q9BXF3 1484 aa21.31■■□□□ 1
RN7SL616P-201ENST00000584555 NCAPD3P42695 1498 aa20.77■□□□□ 0.92
RN7SL616P-201ENST00000584555 SMARCA4P51532 1647 aa20.75■□□□□ 0.91
RN7SL616P-201ENST00000584555 ATAD2BQ9ULI0 1458 aa20.73■□□□□ 0.91
RN7SL616P-201ENST00000584555 SMARCA2P51531 1590 aa20.65■□□□□ 0.9
RN7SL616P-201ENST00000584555 BAZ1AQ9NRL2 1556 aaPredicted RBP20.64■□□□□ 0.9
RN7SL616P-201ENST00000584555 HMGXB3Q12766 1538 aa20.63■□□□□ 0.89
RN7SL616P-201ENST00000584555 PEG3Q9GZU2 1588 aa20.57■□□□□ 0.88
RN7SL616P-201ENST00000584555 MROH2BQ7Z745 1585 aa20.54■□□□□ 0.88
RN7SL616P-201ENST00000584555 BAZ1BQ9UIG0 1483 aaKnown RBP20.5■□□□□ 0.87
RN7SL616P-201ENST00000584555 NESP48681 1621 aa20.41■□□□□ 0.86
RN7SL616P-201ENST00000584555 ERCC6Q03468 1493 aa20.38■□□□□ 0.85
RN7SL616P-201ENST00000584555 CUX2O14529 1486 aa20.34■□□□□ 0.85
RN7SL616P-201ENST00000584555 WIZO95785 1651 aa20.31■□□□□ 0.84
RN7SL616P-201ENST00000584555 LAMC3Q9Y6N6 1575 aa20.27■□□□□ 0.84
RN7SL616P-201ENST00000584555 THOC2Q8NI27 1593 aaKnown RBP20.19■□□□□ 0.82
RN7SL616P-201ENST00000584555 KIF21AQ7Z4S6 1674 aa20.17■□□□□ 0.82
RN7SL616P-201ENST00000584555 DNAJC5Q9H3Z4 198 aa20.17■□□□□ 0.82
RN7SL616P-201ENST00000584555 RSF1Q96T23 1441 aaPredicted RBP20.15■□□□□ 0.82
RN7SL616P-201ENST00000584555 CADPSQ9ULU8 1353 aa20.12■□□□□ 0.81
RN7SL616P-201ENST00000584555 PDS5BQ9NTI5 1447 aa20.1■□□□□ 0.81
RN7SL616P-201ENST00000584555 TOP2AP11388 1531 aaKnown RBP20.03■□□□□ 0.8
RN7SL616P-201ENST00000584555 CFTRP13569 1480 aa19.95■□□□□ 0.78
RN7SL616P-201ENST00000584555 MRC2Q9UBG0 1479 aa19.95■□□□□ 0.78
RN7SL616P-201ENST00000584555 WDR62O43379 1518 aa19.93■□□□□ 0.78
RN7SL616P-201ENST00000584555 FANCD2Q9BXW9 1451 aa19.9■□□□□ 0.78
RN7SL616P-201ENST00000584555 CEP164Q9UPV0 1460 aa19.89■□□□□ 0.77
RN7SL616P-201ENST00000584555 CCDC88BA6NC98 1476 aa19.8■□□□□ 0.76
RN7SL616P-201ENST00000584555 PRDM2Q13029 1718 aa19.79■□□□□ 0.76
RN7SL616P-201ENST00000584555 URB2Q14146 1524 aaKnown RBP19.76■□□□□ 0.75
RN7SL616P-201ENST00000584555 TOPBP1Q92547 1522 aa19.56■□□□□ 0.72
RN7SL616P-201ENST00000584555 DNMBPQ6XZF7 1577 aa19.49■□□□□ 0.71
RN7SL616P-201ENST00000584555 IFT140Q96RY7 1462 aa19.49■□□□□ 0.71
RN7SL616P-201ENST00000584555 ZNF608Q9ULD9 1512 aaPredicted RBP19.49■□□□□ 0.71
RN7SL616P-201ENST00000584555 ABCC8Q09428 1581 aa19.49■□□□□ 0.71
RN7SL616P-201ENST00000584555 TARBP1Q13395 1621 aaKnown RBP19.4■□□□□ 0.7
RN7SL616P-201ENST00000584555 OSCARQ8IYS5 282 aa19.4■□□□□ 0.7
RN7SL616P-201ENST00000584555 EIF4G3O43432 1585 aaKnown RBP19.39■□□□□ 0.69
RN7SL616P-201ENST00000584555 POLA1P09884 1462 aaPredicted RBP19.36■□□□□ 0.69
RN7SL616P-201ENST00000584555 AQRO60306 1485 aaKnown RBP eCLIP19.3■□□□□ 0.68
RN7SL616P-201ENST00000584555 TRIM41Q8WV44 630 aa19.29■□□□□ 0.68
RN7SL616P-201ENST00000584555 CUX1P39880 1505 aa19.29■□□□□ 0.68
RN7SL616P-201ENST00000584555 RAD54L2Q9Y4B4 1467 aa19.28■□□□□ 0.68
RN7SL616P-201ENST00000584555 SUPT5HO00267 1087 aaKnown RBP19.28■□□□□ 0.68
RN7SL616P-201ENST00000584555 FGD5Q6ZNL6 1462 aa19.25■□□□□ 0.67
RN7SL616P-201ENST00000584555 SOGA1O94964 1423 aa19.24■□□□□ 0.67
RN7SL616P-201ENST00000584555 CHD1O14646 1710 aa19.23■□□□□ 0.67
RN7SL616P-201ENST00000584555 RIMBP3CA6NJZ7 1639 aa19.2■□□□□ 0.66
RN7SL616P-201ENST00000584555 RIMBP3BA6NNM3 1639 aa19.2■□□□□ 0.66
RN7SL616P-201ENST00000584555 RIMBP3Q9UFD9 1639 aa19.2■□□□□ 0.66
RN7SL616P-201ENST00000584555 TDRD9Q8NDG6 1382 aaKnown RBP19.19■□□□□ 0.66
RN7SL616P-201ENST00000584555 WDR97A6NE52 1622 aa19.18■□□□□ 0.66
RN7SL616P-201ENST00000584555 ARHGEF11O15085 1522 aa19.15■□□□□ 0.66
RN7SL616P-201ENST00000584555 SNAPC4Q5SXM2 1469 aa19.11■□□□□ 0.65
RN7SL616P-201ENST00000584555 FBLN2P98095 1184 aa19.07■□□□□ 0.64
RN7SL616P-201ENST00000584555 GRIN2BQ13224 1484 aa19.06■□□□□ 0.64
RN7SL616P-201ENST00000584555 MAGI1Q96QZ7 1491 aaPredicted RBP19.06■□□□□ 0.64
RN7SL616P-201ENST00000584555 PBRM1Q86U86 1689 aa19.05■□□□□ 0.64
RN7SL616P-201ENST00000584555 ABCA10Q8WWZ4 1543 aa19.05■□□□□ 0.64
RN7SL616P-201ENST00000584555 ABCA5Q8WWZ7 1642 aa19.03■□□□□ 0.64
RN7SL616P-201ENST00000584555 BIVM-ERCC5R4GMW8 1640 aa19.03■□□□□ 0.64
RN7SL616P-201ENST00000584555 GAPVD1Q14C86 1478 aa19.03■□□□□ 0.64
RN7SL616P-201ENST00000584555 CLASP1Q7Z460 1538 aa19.01■□□□□ 0.63
RN7SL616P-201ENST00000584555 TOP2BQ02880 1626 aa19.01■□□□□ 0.63
RN7SL616P-201ENST00000584555 SYNJ1O43426 1573 aa19.01■□□□□ 0.63
RN7SL616P-201ENST00000584555 SYNJ2O15056 1496 aa19■□□□□ 0.63
RN7SL616P-201ENST00000584555 WRNQ14191 1432 aaPredicted RBP eCLIP18.98■□□□□ 0.63
RN7SL616P-201ENST00000584555 ARAP1Q96P48 1450 aa18.97■□□□□ 0.63
RN7SL616P-201ENST00000584555 CHMP7Q8WUX9 453 aaPredicted RBP18.97■□□□□ 0.63
RN7SL616P-201ENST00000584555 CYB5RLQ6IPT4 315 aa18.94■□□□□ 0.62
RN7SL616P-201ENST00000584555 ADAMTS12P58397 1594 aa18.86■□□□□ 0.61
RN7SL616P-201ENST00000584555 GRIN2AQ12879 1464 aa18.84■□□□□ 0.61
RN7SL616P-201ENST00000584555 ERICH3Q5RHP9 1530 aa18.81■□□□□ 0.6
RN7SL616P-201ENST00000584555 CEP170Q5SW79 1584 aa18.79■□□□□ 0.6
RN7SL616P-201ENST00000584555 FHAD1B1AJZ9 1412 aa18.78■□□□□ 0.6
RN7SL616P-201ENST00000584555 NUP160Q12769 1436 aa18.78■□□□□ 0.6
RN7SL616P-201ENST00000584555 ERCC6L2Q5T890 1561 aa18.74■□□□□ 0.59
RN7SL616P-201ENST00000584555 SHROOM2Q13796 1616 aa18.71■□□□□ 0.59
RN7SL616P-201ENST00000584555 TRHP20396 242 aaPredicted RBP18.64■□□□□ 0.57
RN7SL616P-201ENST00000584555 RUSC2Q8N2Y8 1516 aa18.6■□□□□ 0.57
RN7SL616P-201ENST00000584555 IGF1RP08069 1367 aa18.6■□□□□ 0.57
RN7SL616P-201ENST00000584555 KIF27Q86VH2 1401 aa18.58■□□□□ 0.57
RN7SL616P-201ENST00000584555 CUL7Q14999 1698 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms