RNA–Protein interactions for RNA: ENST00000584467.2

RN7SL246P-201, Transcript of RNA, 7SL, cytoplasmic 246, pseudogene, humanhuman

BASIC

Gene RN7SL246P, Length 296 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL246P-201ENST00000584467 NISCHQ9Y2I1 1504 aa21.29■■□□□ 1
RN7SL246P-201ENST00000584467 CCDC180Q9P1Z9 1646 aa19.09■□□□□ 0.65
RN7SL246P-201ENST00000584467 ABCC9O60706 1549 aa18.67■□□□□ 0.58
RN7SL246P-201ENST00000584467 RB1CC1Q8TDY2 1594 aa17.99■□□□□ 0.47
RN7SL246P-201ENST00000584467 NACADO15069 1562 aa17.91■□□□□ 0.46
RN7SL246P-201ENST00000584467 DCAF8L2P0C7V8 631 aa17.78■□□□□ 0.44
RN7SL246P-201ENST00000584467 MYO15BQ96JP2 1530 aa17.74■□□□□ 0.43
RN7SL246P-201ENST00000584467 ZCCHC6Q5VYS8 1495 aaKnown RBP17.72■□□□□ 0.43
RN7SL246P-201ENST00000584467 DCAF1Q9Y4B6 1507 aa17.63■□□□□ 0.41
RN7SL246P-201ENST00000584467 UNC13AQ9UPW8 1703 aa17.62■□□□□ 0.41
RN7SL246P-201ENST00000584467 BICRAQ9NZM4 1560 aa17.38■□□□□ 0.37
RN7SL246P-201ENST00000584467 SCRIBQ14160 1630 aa17.36■□□□□ 0.37
RN7SL246P-201ENST00000584467 PABPN1Q86U42 306 aaKnown RBP eCLIP17.35■□□□□ 0.37
RN7SL246P-201ENST00000584467 SHROOM4Q9ULL8 1493 aa17.25■□□□□ 0.35
RN7SL246P-201ENST00000584467 DNAJC5BQ9UF47 199 aa17.11■□□□□ 0.33
RN7SL246P-201ENST00000584467 EIF4G1Q04637 1599 aaKnown RBP16.97■□□□□ 0.31
RN7SL246P-201ENST00000584467 CC2D2AQ9P2K1 1620 aa16.92■□□□□ 0.3
RN7SL246P-201ENST00000584467 CECR2Q9BXF3 1484 aa16.8■□□□□ 0.28
RN7SL246P-201ENST00000584467 SMARCA4P51532 1647 aa16.59■□□□□ 0.25
RN7SL246P-201ENST00000584467 BAZ1AQ9NRL2 1556 aaPredicted RBP16.55■□□□□ 0.24
RN7SL246P-201ENST00000584467 SMARCA2P51531 1590 aa16.51■□□□□ 0.23
RN7SL246P-201ENST00000584467 NCAPD3P42695 1498 aa16.47■□□□□ 0.23
RN7SL246P-201ENST00000584467 ATAD2BQ9ULI0 1458 aa16.46■□□□□ 0.23
RN7SL246P-201ENST00000584467 HMGXB3Q12766 1538 aa16.45■□□□□ 0.22
RN7SL246P-201ENST00000584467 PEG3Q9GZU2 1588 aa16.41■□□□□ 0.22
RN7SL246P-201ENST00000584467 MROH2BQ7Z745 1585 aa16.38■□□□□ 0.21
RN7SL246P-201ENST00000584467 BAZ1BQ9UIG0 1483 aaKnown RBP16.36■□□□□ 0.21
RN7SL246P-201ENST00000584467 WIZO95785 1651 aa16.26■□□□□ 0.19
RN7SL246P-201ENST00000584467 ERCC6Q03468 1493 aa16.15■□□□□ 0.18
RN7SL246P-201ENST00000584467 LAMC3Q9Y6N6 1575 aa16.13■□□□□ 0.17
RN7SL246P-201ENST00000584467 RSF1Q96T23 1441 aaPredicted RBP16.12■□□□□ 0.17
RN7SL246P-201ENST00000584467 NESP48681 1621 aa16.11■□□□□ 0.17
RN7SL246P-201ENST00000584467 TOP2AP11388 1531 aaKnown RBP16.08■□□□□ 0.16
RN7SL246P-201ENST00000584467 KIF21AQ7Z4S6 1674 aa16.02■□□□□ 0.16
RN7SL246P-201ENST00000584467 CUX2O14529 1486 aa16.01■□□□□ 0.15
RN7SL246P-201ENST00000584467 PDS5BQ9NTI5 1447 aa15.98■□□□□ 0.15
RN7SL246P-201ENST00000584467 THOC2Q8NI27 1593 aaKnown RBP15.97■□□□□ 0.15
RN7SL246P-201ENST00000584467 CADPSQ9ULU8 1353 aa15.97■□□□□ 0.15
RN7SL246P-201ENST00000584467 PRDM2Q13029 1718 aa15.91■□□□□ 0.14
RN7SL246P-201ENST00000584467 CFTRP13569 1480 aa15.87■□□□□ 0.13
RN7SL246P-201ENST00000584467 CEP164Q9UPV0 1460 aa15.84■□□□□ 0.13
RN7SL246P-201ENST00000584467 MRC2Q9UBG0 1479 aa15.84■□□□□ 0.13
RN7SL246P-201ENST00000584467 CCDC88BA6NC98 1476 aa15.83■□□□□ 0.12
RN7SL246P-201ENST00000584467 FANCD2Q9BXW9 1451 aa15.82■□□□□ 0.12
RN7SL246P-201ENST00000584467 WDR62O43379 1518 aa15.8■□□□□ 0.12
RN7SL246P-201ENST00000584467 URB2Q14146 1524 aaKnown RBP15.65■□□□□ 0.1
RN7SL246P-201ENST00000584467 SUPT5HO00267 1087 aaKnown RBP15.62■□□□□ 0.09
RN7SL246P-201ENST00000584467 ABCC8Q09428 1581 aa15.58■□□□□ 0.09
RN7SL246P-201ENST00000584467 DNMBPQ6XZF7 1577 aa15.58■□□□□ 0.08
RN7SL246P-201ENST00000584467 TOPBP1Q92547 1522 aa15.56■□□□□ 0.08
RN7SL246P-201ENST00000584467 DNAJC5Q9H3Z4 198 aa15.55■□□□□ 0.08
RN7SL246P-201ENST00000584467 IFT140Q96RY7 1462 aa15.5■□□□□ 0.07
RN7SL246P-201ENST00000584467 EIF4G3O43432 1585 aaKnown RBP15.43■□□□□ 0.06
RN7SL246P-201ENST00000584467 TARBP1Q13395 1621 aaKnown RBP15.42■□□□□ 0.06
RN7SL246P-201ENST00000584467 POLA1P09884 1462 aaPredicted RBP15.41■□□□□ 0.06
RN7SL246P-201ENST00000584467 ZNF608Q9ULD9 1512 aaPredicted RBP15.4■□□□□ 0.06
RN7SL246P-201ENST00000584467 CUX1P39880 1505 aa15.38■□□□□ 0.05
RN7SL246P-201ENST00000584467 FGD5Q6ZNL6 1462 aa15.37■□□□□ 0.05
RN7SL246P-201ENST00000584467 WDR97A6NE52 1622 aa15.35■□□□□ 0.05
RN7SL246P-201ENST00000584467 SOGA1O94964 1423 aa15.33■□□□□ 0.04
RN7SL246P-201ENST00000584467 RAD54L2Q9Y4B4 1467 aa15.32■□□□□ 0.04
RN7SL246P-201ENST00000584467 BIVM-ERCC5R4GMW8 1640 aa15.31■□□□□ 0.04
RN7SL246P-201ENST00000584467 CHD1O14646 1710 aa15.29■□□□□ 0.04
RN7SL246P-201ENST00000584467 AQRO60306 1485 aaKnown RBP eCLIP15.28■□□□□ 0.04
RN7SL246P-201ENST00000584467 TOP2BQ02880 1626 aa15.28■□□□□ 0.04
RN7SL246P-201ENST00000584467 PBRM1Q86U86 1689 aa15.26■□□□□ 0.03
RN7SL246P-201ENST00000584467 WRNQ14191 1432 aaPredicted RBP eCLIP15.26■□□□□ 0.03
RN7SL246P-201ENST00000584467 OSCARQ8IYS5 282 aa15.25■□□□□ 0.03
RN7SL246P-201ENST00000584467 SYNJ1O43426 1573 aa15.24■□□□□ 0.03
RN7SL246P-201ENST00000584467 TDRD9Q8NDG6 1382 aaKnown RBP15.24■□□□□ 0.03
RN7SL246P-201ENST00000584467 ABCA10Q8WWZ4 1543 aa15.21■□□□□ 0.03
RN7SL246P-201ENST00000584467 ABCA5Q8WWZ7 1642 aa15.21■□□□□ 0.02
RN7SL246P-201ENST00000584467 GRIN2BQ13224 1484 aa15.2■□□□□ 0.02
RN7SL246P-201ENST00000584467 SNAPC4Q5SXM2 1469 aa15.19■□□□□ 0.02
RN7SL246P-201ENST00000584467 MAGI1Q96QZ7 1491 aaPredicted RBP15.18■□□□□ 0.02
RN7SL246P-201ENST00000584467 GAPVD1Q14C86 1478 aa15.17■□□□□ 0.02
RN7SL246P-201ENST00000584467 FBLN2P98095 1184 aa15.14■□□□□ 0.01
RN7SL246P-201ENST00000584467 SYNJ2O15056 1496 aa15.12■□□□□ 0.01
RN7SL246P-201ENST00000584467 RIMBP3CA6NJZ7 1639 aa15.11■□□□□ 0.01
RN7SL246P-201ENST00000584467 RIMBP3BA6NNM3 1639 aa15.11■□□□□ 0.01
RN7SL246P-201ENST00000584467 RIMBP3Q9UFD9 1639 aa15.11■□□□□ 0.01
RN7SL246P-201ENST00000584467 CHMP7Q8WUX9 453 aaPredicted RBP15.08■□□□□ 0
RN7SL246P-201ENST00000584467 ADAMTS12P58397 1594 aa15.07■□□□□ 0
RN7SL246P-201ENST00000584467 ARHGEF11O15085 1522 aa15.07■□□□□ 0
RN7SL246P-201ENST00000584467 ERICH3Q5RHP9 1530 aa15.06■□□□□ 0
RN7SL246P-201ENST00000584467 CLASP1Q7Z460 1538 aa15.05■□□□□ -0
RN7SL246P-201ENST00000584467 TRIM41Q8WV44 630 aa15.03■□□□□ -0
RN7SL246P-201ENST00000584467 GRIN2AQ12879 1464 aa15.01□□□□□ -0.01
RN7SL246P-201ENST00000584467 FHAD1B1AJZ9 1412 aa14.99□□□□□ -0.01
RN7SL246P-201ENST00000584467 CUL7Q14999 1698 aa14.96□□□□□ -0.01
RN7SL246P-201ENST00000584467 CEP170Q5SW79 1584 aa14.94□□□□□ -0.02
RN7SL246P-201ENST00000584467 KIF27Q86VH2 1401 aa14.94□□□□□ -0.02
RN7SL246P-201ENST00000584467 ARAP1Q96P48 1450 aa14.92□□□□□ -0.02
RN7SL246P-201ENST00000584467 NUP160Q12769 1436 aa14.91□□□□□ -0.02
RN7SL246P-201ENST00000584467 SHROOM2Q13796 1616 aa14.88□□□□□ -0.03
RN7SL246P-201ENST00000584467 RUSC2Q8N2Y8 1516 aa14.87□□□□□ -0.03
RN7SL246P-201ENST00000584467 CYB5RLQ6IPT4 315 aa14.86□□□□□ -0.03
RN7SL246P-201ENST00000584467 IGF1RP08069 1367 aa14.83□□□□□ -0.04
RN7SL246P-201ENST00000584467 ERCC6L2Q5T890 1561 aa14.79□□□□□ -0.04
RN7SL246P-201ENST00000584467 CARMIL1Q5VZK9 1371 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms