RNA–Protein interactions for RNA: ENST00000584236.1

PHF12-214, Transcript of PHD finger protein 12, humanhuman

TSL 4

Gene PHF12, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF12-214ENST00000584236 NISCHQ9Y2I1 1504 aa26.71■■□□□ 1.87
PHF12-214ENST00000584236 ABCC9O60706 1549 aa24.63■■□□□ 1.53
PHF12-214ENST00000584236 CCDC180Q9P1Z9 1646 aa24.16■■□□□ 1.46
PHF12-214ENST00000584236 DNAJC5BQ9UF47 199 aa23.39■■□□□ 1.33
PHF12-214ENST00000584236 RB1CC1Q8TDY2 1594 aa23.24■■□□□ 1.31
PHF12-214ENST00000584236 NACADO15069 1562 aa22.95■■□□□ 1.26
PHF12-214ENST00000584236 DCAF8L2P0C7V8 631 aa22.87■■□□□ 1.25
PHF12-214ENST00000584236 PABPN1Q86U42 306 aaKnown RBP eCLIP22.87■■□□□ 1.25
PHF12-214ENST00000584236 UNC13AQ9UPW8 1703 aa22.65■■□□□ 1.22
PHF12-214ENST00000584236 BICRAQ9NZM4 1560 aa22.51■■□□□ 1.19
PHF12-214ENST00000584236 MYO15BQ96JP2 1530 aa22.44■■□□□ 1.18
PHF12-214ENST00000584236 CECR2Q9BXF3 1484 aa22.22■■□□□ 1.15
PHF12-214ENST00000584236 SHROOM4Q9ULL8 1493 aa22.2■■□□□ 1.14
PHF12-214ENST00000584236 CC2D2AQ9P2K1 1620 aa22.2■■□□□ 1.14
PHF12-214ENST00000584236 ZCCHC6Q5VYS8 1495 aaKnown RBP22.06■■□□□ 1.12
PHF12-214ENST00000584236 SCRIBQ14160 1630 aa22.06■■□□□ 1.12
PHF12-214ENST00000584236 EIF4G1Q04637 1599 aaKnown RBP22.04■■□□□ 1.12
PHF12-214ENST00000584236 DCAF1Q9Y4B6 1507 aa22.01■■□□□ 1.11
PHF12-214ENST00000584236 DNAJC5Q9H3Z4 198 aa21.82■■□□□ 1.08
PHF12-214ENST00000584236 CUX2O14529 1486 aa21.39■■□□□ 1.01
PHF12-214ENST00000584236 ERCC6Q03468 1493 aa21.36■■□□□ 1.01
PHF12-214ENST00000584236 NCAPD3P42695 1498 aa21.16■□□□□ 0.98
PHF12-214ENST00000584236 ATAD2BQ9ULI0 1458 aa21.07■□□□□ 0.96
PHF12-214ENST00000584236 SMARCA2P51531 1590 aa21.02■□□□□ 0.95
PHF12-214ENST00000584236 NESP48681 1621 aa21.01■□□□□ 0.95
PHF12-214ENST00000584236 HMGXB3Q12766 1538 aa21■□□□□ 0.95
PHF12-214ENST00000584236 SMARCA4P51532 1647 aa20.95■□□□□ 0.94
PHF12-214ENST00000584236 BAZ1BQ9UIG0 1483 aaKnown RBP20.89■□□□□ 0.94
PHF12-214ENST00000584236 THOC2Q8NI27 1593 aaKnown RBP20.87■□□□□ 0.93
PHF12-214ENST00000584236 TRIM41Q8WV44 630 aa20.81■□□□□ 0.92
PHF12-214ENST00000584236 BAZ1AQ9NRL2 1556 aaPredicted RBP20.8■□□□□ 0.92
PHF12-214ENST00000584236 LAMC3Q9Y6N6 1575 aa20.79■□□□□ 0.92
PHF12-214ENST00000584236 KIF21AQ7Z4S6 1674 aa20.73■□□□□ 0.91
PHF12-214ENST00000584236 PDS5BQ9NTI5 1447 aa20.72■□□□□ 0.91
PHF12-214ENST00000584236 PEG3Q9GZU2 1588 aa20.7■□□□□ 0.9
PHF12-214ENST00000584236 MROH2BQ7Z745 1585 aa20.59■□□□□ 0.89
PHF12-214ENST00000584236 MRC2Q9UBG0 1479 aa20.56■□□□□ 0.88
PHF12-214ENST00000584236 CADPSQ9ULU8 1353 aa20.54■□□□□ 0.88
PHF12-214ENST00000584236 WDR62O43379 1518 aa20.49■□□□□ 0.87
PHF12-214ENST00000584236 CEP164Q9UPV0 1460 aa20.42■□□□□ 0.86
PHF12-214ENST00000584236 OSCARQ8IYS5 282 aa20.35■□□□□ 0.85
PHF12-214ENST00000584236 WIZO95785 1651 aa20.33■□□□□ 0.85
PHF12-214ENST00000584236 FANCD2Q9BXW9 1451 aa20.33■□□□□ 0.85
PHF12-214ENST00000584236 CFTRP13569 1480 aa20.2■□□□□ 0.82
PHF12-214ENST00000584236 URB2Q14146 1524 aaKnown RBP20.17■□□□□ 0.82
PHF12-214ENST00000584236 RIMBP3CA6NJZ7 1639 aa20.12■□□□□ 0.81
PHF12-214ENST00000584236 RIMBP3BA6NNM3 1639 aa20.12■□□□□ 0.81
PHF12-214ENST00000584236 RIMBP3Q9UFD9 1639 aa20.12■□□□□ 0.81
PHF12-214ENST00000584236 TOP2AP11388 1531 aaKnown RBP20.06■□□□□ 0.8
PHF12-214ENST00000584236 ARHGEF11O15085 1522 aa20.02■□□□□ 0.8
PHF12-214ENST00000584236 RSF1Q96T23 1441 aaPredicted RBP20.01■□□□□ 0.79
PHF12-214ENST00000584236 IFT140Q96RY7 1462 aa20■□□□□ 0.79
PHF12-214ENST00000584236 ZNF608Q9ULD9 1512 aaPredicted RBP19.99■□□□□ 0.79
PHF12-214ENST00000584236 PRDM2Q13029 1718 aa19.97■□□□□ 0.79
PHF12-214ENST00000584236 CYB5RLQ6IPT4 315 aa19.93■□□□□ 0.78
PHF12-214ENST00000584236 TRHP20396 242 aaPredicted RBP19.91■□□□□ 0.78
PHF12-214ENST00000584236 EIF4G3O43432 1585 aaKnown RBP19.88■□□□□ 0.77
PHF12-214ENST00000584236 TOPBP1Q92547 1522 aa19.88■□□□□ 0.77
PHF12-214ENST00000584236 CCDC88BA6NC98 1476 aa19.81■□□□□ 0.76
PHF12-214ENST00000584236 FBLN2P98095 1184 aa19.81■□□□□ 0.76
PHF12-214ENST00000584236 ABCC8Q09428 1581 aa19.81■□□□□ 0.76
PHF12-214ENST00000584236 CHD1O14646 1710 aa19.81■□□□□ 0.76
PHF12-214ENST00000584236 ARAP1Q96P48 1450 aa19.79■□□□□ 0.76
PHF12-214ENST00000584236 DNMBPQ6XZF7 1577 aa19.78■□□□□ 0.76
PHF12-214ENST00000584236 AQRO60306 1485 aaKnown RBP eCLIP19.77■□□□□ 0.763e-6■■■■□ 24.1
PHF12-214ENST00000584236 TARBP1Q13395 1621 aaKnown RBP19.7■□□□□ 0.74
PHF12-214ENST00000584236 AEBP2Q6ZN18 517 aaPredicted RBP19.66■□□□□ 0.74
PHF12-214ENST00000584236 POLA1P09884 1462 aaPredicted RBP19.66■□□□□ 0.74
PHF12-214ENST00000584236 RAD54L2Q9Y4B4 1467 aa19.6■□□□□ 0.73
PHF12-214ENST00000584236 TDRD9Q8NDG6 1382 aaKnown RBP19.59■□□□□ 0.73
PHF12-214ENST00000584236 SNAPC4Q5SXM2 1469 aa19.59■□□□□ 0.73
PHF12-214ENST00000584236 SOGA1O94964 1423 aa19.57■□□□□ 0.72
PHF12-214ENST00000584236 CHMP7Q8WUX9 453 aaPredicted RBP19.56■□□□□ 0.72
PHF12-214ENST00000584236 SYNJ1O43426 1573 aa19.55■□□□□ 0.72
PHF12-214ENST00000584236 CLASP1Q7Z460 1538 aa19.54■□□□□ 0.72
PHF12-214ENST00000584236 WDR97A6NE52 1622 aa19.5■□□□□ 0.71
PHF12-214ENST00000584236 MAGI1Q96QZ7 1491 aaPredicted RBP19.49■□□□□ 0.71
PHF12-214ENST00000584236 FGD5Q6ZNL6 1462 aa19.48■□□□□ 0.71
PHF12-214ENST00000584236 GRIN2BQ13224 1484 aa19.46■□□□□ 0.71
PHF12-214ENST00000584236 SYNJ2O15056 1496 aa19.43■□□□□ 0.7
PHF12-214ENST00000584236 GAPVD1Q14C86 1478 aa19.41■□□□□ 0.7
PHF12-214ENST00000584236 CUX1P39880 1505 aa19.38■□□□□ 0.69
PHF12-214ENST00000584236 PBRM1Q86U86 1689 aa19.34■□□□□ 0.69
PHF12-214ENST00000584236 ABCA5Q8WWZ7 1642 aa19.22■□□□□ 0.67
PHF12-214ENST00000584236 ABCA10Q8WWZ4 1543 aa19.21■□□□□ 0.67
PHF12-214ENST00000584236 ERCC6L2Q5T890 1561 aa19.21■□□□□ 0.67
PHF12-214ENST00000584236 GRIN2AQ12879 1464 aa19.2■□□□□ 0.66
PHF12-214ENST00000584236 CEP170Q5SW79 1584 aa19.16■□□□□ 0.66
PHF12-214ENST00000584236 ADAMTS12P58397 1594 aa19.14■□□□□ 0.65
PHF12-214ENST00000584236 NUP160Q12769 1436 aa19.12■□□□□ 0.65
PHF12-214ENST00000584236 WRNQ14191 1432 aaPredicted RBP eCLIP19.09■□□□□ 0.65
PHF12-214ENST00000584236 FHAD1B1AJZ9 1412 aa19.07■□□□□ 0.64
PHF12-214ENST00000584236 SHROOM2Q13796 1616 aa19.07■□□□□ 0.64
PHF12-214ENST00000584236 KIF13AQ9H1H9 1805 aa19.06■□□□□ 0.64
PHF12-214ENST00000584236 PRG4Q92954 1404 aaPredicted RBP19.01■□□□□ 0.63
PHF12-214ENST00000584236 FAM69CQ0P6D2 419 aa18.99■□□□□ 0.63
PHF12-214ENST00000584236 ERICH3Q5RHP9 1530 aa18.98■□□□□ 0.63
PHF12-214ENST00000584236 NPM1P06748 294 aaKnown RBP eCLIP18.97■□□□□ 0.63
PHF12-214ENST00000584236 JPH4Q96JJ6 628 aa18.95■□□□□ 0.62
PHF12-214ENST00000584236 TOP2BQ02880 1626 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 207.5 ms