RNA–Protein interactions for RNA: ENST00000584099.1

ERBB2-217, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 4

Gene ERBB2, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-217ENST00000584099 NISCHQ9Y2I1 1504 aa32.2■■■□□ 2.74
ERBB2-217ENST00000584099 CCDC180Q9P1Z9 1646 aa28.79■■■□□ 2.2
ERBB2-217ENST00000584099 ABCC9O60706 1549 aa28.51■■■□□ 2.15
ERBB2-217ENST00000584099 RB1CC1Q8TDY2 1594 aa27.34■■□□□ 1.97
ERBB2-217ENST00000584099 NACADO15069 1562 aa27.25■■□□□ 1.95
ERBB2-217ENST00000584099 MYO15BQ96JP2 1530 aa27.06■■□□□ 1.92
ERBB2-217ENST00000584099 DCAF8L2P0C7V8 631 aa26.96■■□□□ 1.91
ERBB2-217ENST00000584099 DCAF1Q9Y4B6 1507 aa26.73■■□□□ 1.87
ERBB2-217ENST00000584099 ZCCHC6Q5VYS8 1495 aaKnown RBP26.73■■□□□ 1.87
ERBB2-217ENST00000584099 DNAJC5BQ9UF47 199 aa26.59■■□□□ 1.85
ERBB2-217ENST00000584099 PABPN1Q86U42 306 aaKnown RBP eCLIP26.58■■□□□ 1.85
ERBB2-217ENST00000584099 UNC13AQ9UPW8 1703 aa26.46■■□□□ 1.83
ERBB2-217ENST00000584099 BICRAQ9NZM4 1560 aa26.46■■□□□ 1.83
ERBB2-217ENST00000584099 SHROOM4Q9ULL8 1493 aa26.38■■□□□ 1.81
ERBB2-217ENST00000584099 SCRIBQ14160 1630 aa26.1■■□□□ 1.77
ERBB2-217ENST00000584099 EIF4G1Q04637 1599 aaKnown RBP25.82■■□□□ 1.72
ERBB2-217ENST00000584099 CC2D2AQ9P2K1 1620 aa25.77■■□□□ 1.72
ERBB2-217ENST00000584099 CECR2Q9BXF3 1484 aa25.75■■□□□ 1.71
ERBB2-217ENST00000584099 NCAPD3P42695 1498 aa25.19■■□□□ 1.62
ERBB2-217ENST00000584099 ATAD2BQ9ULI0 1458 aa25.06■■□□□ 1.6
ERBB2-217ENST00000584099 SMARCA2P51531 1590 aa25.03■■□□□ 1.6
ERBB2-217ENST00000584099 SMARCA4P51532 1647 aa25.01■■□□□ 1.59
ERBB2-217ENST00000584099 BAZ1AQ9NRL2 1556 aaPredicted RBP25■■□□□ 1.59
ERBB2-217ENST00000584099 HMGXB3Q12766 1538 aa24.97■■□□□ 1.59
ERBB2-217ENST00000584099 PEG3Q9GZU2 1588 aa24.88■■□□□ 1.57
ERBB2-217ENST00000584099 BAZ1BQ9UIG0 1483 aaKnown RBP24.81■■□□□ 1.56
ERBB2-217ENST00000584099 MROH2BQ7Z745 1585 aa24.72■■□□□ 1.55
ERBB2-217ENST00000584099 CUX2O14529 1486 aa24.67■■□□□ 1.54
ERBB2-217ENST00000584099 ERCC6Q03468 1493 aa24.67■■□□□ 1.54
ERBB2-217ENST00000584099 LAMC3Q9Y6N6 1575 aa24.52■■□□□ 1.52
ERBB2-217ENST00000584099 NESP48681 1621 aa24.52■■□□□ 1.52
ERBB2-217ENST00000584099 PDS5BQ9NTI5 1447 aa24.44■■□□□ 1.5
ERBB2-217ENST00000584099 DNAJC5Q9H3Z4 198 aa24.43■■□□□ 1.5
ERBB2-217ENST00000584099 CADPSQ9ULU8 1353 aa24.41■■□□□ 1.5
ERBB2-217ENST00000584099 RSF1Q96T23 1441 aaPredicted RBP24.36■■□□□ 1.49
ERBB2-217ENST00000584099 WIZO95785 1651 aa24.35■■□□□ 1.49
ERBB2-217ENST00000584099 THOC2Q8NI27 1593 aaKnown RBP24.27■■□□□ 1.48
ERBB2-217ENST00000584099 TOP2AP11388 1531 aaKnown RBP24.2■■□□□ 1.47
ERBB2-217ENST00000584099 CFTRP13569 1480 aa24.16■■□□□ 1.46
ERBB2-217ENST00000584099 MRC2Q9UBG0 1479 aa24.14■■□□□ 1.46
ERBB2-217ENST00000584099 KIF21AQ7Z4S6 1674 aa24.14■■□□□ 1.45
ERBB2-217ENST00000584099 WDR62O43379 1518 aa24.08■■□□□ 1.45
ERBB2-217ENST00000584099 CEP164Q9UPV0 1460 aa24.07■■□□□ 1.44
ERBB2-217ENST00000584099 FANCD2Q9BXW9 1451 aa24.06■■□□□ 1.44
ERBB2-217ENST00000584099 CCDC88BA6NC98 1476 aa23.91■■□□□ 1.42
ERBB2-217ENST00000584099 URB2Q14146 1524 aaKnown RBP23.8■■□□□ 1.4
ERBB2-217ENST00000584099 PRDM2Q13029 1718 aa23.72■■□□□ 1.39
ERBB2-217ENST00000584099 ABCC8Q09428 1581 aa23.71■■□□□ 1.39
ERBB2-217ENST00000584099 IFT140Q96RY7 1462 aa23.64■■□□□ 1.38
ERBB2-217ENST00000584099 TOPBP1Q92547 1522 aa23.6■■□□□ 1.37
ERBB2-217ENST00000584099 OSCARQ8IYS5 282 aa23.57■■□□□ 1.36
ERBB2-217ENST00000584099 DNMBPQ6XZF7 1577 aa23.54■■□□□ 1.36
ERBB2-217ENST00000584099 ZNF608Q9ULD9 1512 aaPredicted RBP23.45■■□□□ 1.34
ERBB2-217ENST00000584099 POLA1P09884 1462 aaPredicted RBP23.39■■□□□ 1.34
ERBB2-217ENST00000584099 TARBP1Q13395 1621 aaKnown RBP23.36■■□□□ 1.33
ERBB2-217ENST00000584099 EIF4G3O43432 1585 aaKnown RBP23.31■■□□□ 1.32
ERBB2-217ENST00000584099 SOGA1O94964 1423 aa23.31■■□□□ 1.32
ERBB2-217ENST00000584099 SUPT5HO00267 1087 aaKnown RBP23.29■■□□□ 1.32
ERBB2-217ENST00000584099 AQRO60306 1485 aaKnown RBP eCLIP23.29■■□□□ 1.326e-8■■■□□ 18.3
ERBB2-217ENST00000584099 WDR97A6NE52 1622 aa23.28■■□□□ 1.32
ERBB2-217ENST00000584099 TRIM41Q8WV44 630 aa23.25■■□□□ 1.31
ERBB2-217ENST00000584099 FGD5Q6ZNL6 1462 aa23.24■■□□□ 1.31
ERBB2-217ENST00000584099 RAD54L2Q9Y4B4 1467 aa23.23■■□□□ 1.31
ERBB2-217ENST00000584099 CUX1P39880 1505 aa23.23■■□□□ 1.31
ERBB2-217ENST00000584099 TDRD9Q8NDG6 1382 aaKnown RBP23.19■■□□□ 1.3
ERBB2-217ENST00000584099 GRIN2BQ13224 1484 aa23.11■■□□□ 1.29
ERBB2-217ENST00000584099 MAGI1Q96QZ7 1491 aaPredicted RBP23.11■■□□□ 1.29
ERBB2-217ENST00000584099 ARHGEF11O15085 1522 aa23.09■■□□□ 1.29
ERBB2-217ENST00000584099 FBLN2P98095 1184 aa23.08■■□□□ 1.29
ERBB2-217ENST00000584099 RIMBP3CA6NJZ7 1639 aa23.07■■□□□ 1.28
ERBB2-217ENST00000584099 RIMBP3BA6NNM3 1639 aa23.07■■□□□ 1.28
ERBB2-217ENST00000584099 RIMBP3Q9UFD9 1639 aa23.07■■□□□ 1.28
ERBB2-217ENST00000584099 ABCA10Q8WWZ4 1543 aa23.07■■□□□ 1.28
ERBB2-217ENST00000584099 SNAPC4Q5SXM2 1469 aa23.05■■□□□ 1.28
ERBB2-217ENST00000584099 WRNQ14191 1432 aaPredicted RBP eCLIP23.04■■□□□ 1.28
ERBB2-217ENST00000584099 CHMP7Q8WUX9 453 aaPredicted RBP23.03■■□□□ 1.28
ERBB2-217ENST00000584099 GAPVD1Q14C86 1478 aa23.02■■□□□ 1.28
ERBB2-217ENST00000584099 SYNJ2O15056 1496 aa23.01■■□□□ 1.27
ERBB2-217ENST00000584099 CHD1O14646 1710 aa23.01■■□□□ 1.27
ERBB2-217ENST00000584099 TOP2BQ02880 1626 aa22.94■■□□□ 1.26
ERBB2-217ENST00000584099 SYNJ1O43426 1573 aa22.94■■□□□ 1.26
ERBB2-217ENST00000584099 ABCA5Q8WWZ7 1642 aa22.93■■□□□ 1.26
ERBB2-217ENST00000584099 CLASP1Q7Z460 1538 aa22.92■■□□□ 1.26
ERBB2-217ENST00000584099 CYB5RLQ6IPT4 315 aa22.91■■□□□ 1.26
ERBB2-217ENST00000584099 BIVM-ERCC5R4GMW8 1640 aa22.9■■□□□ 1.26
ERBB2-217ENST00000584099 ARAP1Q96P48 1450 aa22.86■■□□□ 1.25
ERBB2-217ENST00000584099 PBRM1Q86U86 1689 aa22.83■■□□□ 1.24
ERBB2-217ENST00000584099 FHAD1B1AJZ9 1412 aa22.79■■□□□ 1.24
ERBB2-217ENST00000584099 GRIN2AQ12879 1464 aa22.79■■□□□ 1.24
ERBB2-217ENST00000584099 ERICH3Q5RHP9 1530 aa22.78■■□□□ 1.24
ERBB2-217ENST00000584099 NUP160Q12769 1436 aa22.74■■□□□ 1.23
ERBB2-217ENST00000584099 ADAMTS12P58397 1594 aa22.73■■□□□ 1.23
ERBB2-217ENST00000584099 CEP170Q5SW79 1584 aa22.61■■□□□ 1.21
ERBB2-217ENST00000584099 KIF27Q86VH2 1401 aa22.58■■□□□ 1.21
ERBB2-217ENST00000584099 TRHP20396 242 aaPredicted RBP22.57■■□□□ 1.2
ERBB2-217ENST00000584099 SHROOM2Q13796 1616 aa22.55■■□□□ 1.2
ERBB2-217ENST00000584099 IGF1RP08069 1367 aa22.54■■□□□ 1.2
ERBB2-217ENST00000584099 JPH4Q96JJ6 628 aa22.5■■□□□ 1.19
ERBB2-217ENST00000584099 PRG4Q92954 1404 aaPredicted RBP22.46■■□□□ 1.19
ERBB2-217ENST00000584099 ERCC6L2Q5T890 1561 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms