RNA–Protein interactions for RNA: ENST00000584015.5

EPB41L3-231, Transcript of erythrocyte membrane protein band 4.1 like 3, human

TSL 3

Gene EPB41L3, Length 500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EPB41L3-231	ENST00000584015	NISCH	Q9Y2I1	1504 aa		70.29	■■■■■ 8.84
EPB41L3-231	ENST00000584015	CCDC180	Q9P1Z9	1646 aa		63.12	■■■■■ 7.7
EPB41L3-231	ENST00000584015	ABCC9	O60706	1549 aa		62.65	■■■■■ 7.62
EPB41L3-231	ENST00000584015	RB1CC1	Q8TDY2	1594 aa		59.86	■■■■■ 7.17
EPB41L3-231	ENST00000584015	NACAD	O15069	1562 aa		59.49	■■■■■ 7.11
EPB41L3-231	ENST00000584015	DCAF8L2	P0C7V8	631 aa		59.06	■■■■■ 7.05
EPB41L3-231	ENST00000584015	MYO15B	Q96JP2	1530 aa		58.75	■■■■■ 7
EPB41L3-231	ENST00000584015	UNC13A	Q9UPW8	1703 aa		58.64	■■■■■ 6.98
EPB41L3-231	ENST00000584015	ZCCHC6	Q5VYS8	1495 aa	Known RBP	58.36	■■■■■ 6.93
EPB41L3-231	ENST00000584015	DNAJC5B	Q9UF47	199 aa		58.32	■■■■■ 6.93
EPB41L3-231	ENST00000584015	PABPN1	Q86U42	306 aa	Known RBP eCLIP	58.26	■■■■■ 6.92
EPB41L3-231	ENST00000584015	DCAF1	Q9Y4B6	1507 aa		58.11	■■■■■ 6.89
EPB41L3-231	ENST00000584015	BICRA	Q9NZM4	1560 aa		58.05	■■■■■ 6.88
EPB41L3-231	ENST00000584015	SCRIB	Q14160	1630 aa		57.47	■■■■■ 6.79
EPB41L3-231	ENST00000584015	SHROOM4	Q9ULL8	1493 aa		57.36	■■■■■ 6.77
EPB41L3-231	ENST00000584015	CC2D2A	Q9P2K1	1620 aa		56.68	■■■■■ 6.66
EPB41L3-231	ENST00000584015	EIF4G1	Q04637	1599 aa	Known RBP	56.63	■■■■■ 6.66
EPB41L3-231	ENST00000584015	CECR2	Q9BXF3	1484 aa		56.41	■■■■■ 6.62
EPB41L3-231	ENST00000584015	SMARCA4	P51532	1647 aa		54.85	■■■■■ 6.37
EPB41L3-231	ENST00000584015	NCAPD3	P42695	1498 aa		54.82	■■■■■ 6.37
EPB41L3-231	ENST00000584015	ATAD2B	Q9ULI0	1458 aa		54.72	■■■■■ 6.35
EPB41L3-231	ENST00000584015	SMARCA2	P51531	1590 aa		54.68	■■■■■ 6.34
EPB41L3-231	ENST00000584015	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	54.6	■■■■■ 6.33
EPB41L3-231	ENST00000584015	HMGXB3	Q12766	1538 aa		54.57	■■■■■ 6.33
EPB41L3-231	ENST00000584015	PEG3	Q9GZU2	1588 aa		54.29	■■■■■ 6.28
EPB41L3-231	ENST00000584015	BAZ1B	Q9UIG0	1483 aa	Known RBP	54.27	■■■■■ 6.28
EPB41L3-231	ENST00000584015	MROH2B	Q7Z745	1585 aa		54.15	■■■■■ 6.26
EPB41L3-231	ENST00000584015	ERCC6	Q03468	1493 aa		54.12	■■■■■ 6.25
EPB41L3-231	ENST00000584015	CUX2	O14529	1486 aa		53.92	■■■■■ 6.22
EPB41L3-231	ENST00000584015	NES	P48681	1621 aa		53.9	■■■■■ 6.22
EPB41L3-231	ENST00000584015	LAMC3	Q9Y6N6	1575 aa		53.67	■■■■■ 6.18
EPB41L3-231	ENST00000584015	WIZ	O95785	1651 aa		53.6	■■■■■ 6.17
EPB41L3-231	ENST00000584015	THOC2	Q8NI27	1593 aa	Known RBP	53.41	■■■■■ 6.14
EPB41L3-231	ENST00000584015	KIF21A	Q7Z4S6	1674 aa		53.38	■■■■■ 6.14
EPB41L3-231	ENST00000584015	DNAJC5	Q9H3Z4	198 aa		53.38	■■■■■ 6.14
EPB41L3-231	ENST00000584015	PDS5B	Q9NTI5	1447 aa		53.25	■■■■■ 6.12
EPB41L3-231	ENST00000584015	CADPS	Q9ULU8	1353 aa		53.15	■■■■■ 6.1
EPB41L3-231	ENST00000584015	RSF1	Q96T23	1441 aa	Predicted RBP	53.08	■■■■■ 6.09
EPB41L3-231	ENST00000584015	TOP2A	P11388	1531 aa	Known RBP	52.94	■■■■■ 6.07
EPB41L3-231	ENST00000584015	MRC2	Q9UBG0	1479 aa		52.82	■■■■■ 6.05
EPB41L3-231	ENST00000584015	WDR62	O43379	1518 aa		52.71	■■■■■ 6.03
EPB41L3-231	ENST00000584015	CEP164	Q9UPV0	1460 aa		52.69	■■■■■ 6.03
EPB41L3-231	ENST00000584015	CFTR	P13569	1480 aa		52.65	■■■■■ 6.02
EPB41L3-231	ENST00000584015	FANCD2	Q9BXW9	1451 aa		52.63	■■■■■ 6.01
EPB41L3-231	ENST00000584015	PRDM2	Q13029	1718 aa		52.44	■■■■■ 5.99
EPB41L3-231	ENST00000584015	CCDC88B	A6NC98	1476 aa		52.24	■■■■■ 5.95
EPB41L3-231	ENST00000584015	URB2	Q14146	1524 aa	Known RBP	52.16	■■■■■ 5.94
EPB41L3-231	ENST00000584015	TOPBP1	Q92547	1522 aa		51.67	■■■■■ 5.86
EPB41L3-231	ENST00000584015	IFT140	Q96RY7	1462 aa		51.59	■■■■■ 5.85
EPB41L3-231	ENST00000584015	ABCC8	Q09428	1581 aa		51.58	■■■■■ 5.85
EPB41L3-231	ENST00000584015	DNMBP	Q6XZF7	1577 aa		51.57	■■■■■ 5.85
EPB41L3-231	ENST00000584015	ZNF608	Q9ULD9	1512 aa	Predicted RBP	51.44	■■■■■ 5.83
EPB41L3-231	ENST00000584015	OSCAR	Q8IYS5	282 aa		51.37	■■■■■ 5.81
EPB41L3-231	ENST00000584015	EIF4G3	O43432	1585 aa	Known RBP	51.32	■■■■■ 5.81
EPB41L3-231	ENST00000584015	TARBP1	Q13395	1621 aa	Known RBP	51.23	■■■■■ 5.79
EPB41L3-231	ENST00000584015	TRIM41	Q8WV44	630 aa		51.22	■■■■■ 5.79
EPB41L3-231	ENST00000584015	POLA1	P09884	1462 aa	Predicted RBP	51.16	■■■■■ 5.78
EPB41L3-231	ENST00000584015	AQR	O60306	1485 aa	Known RBP eCLIP	50.98	■■■■■ 5.75
EPB41L3-231	ENST00000584015	CHD1	O14646	1710 aa		50.93	■■■■■ 5.74
EPB41L3-231	ENST00000584015	RAD54L2	Q9Y4B4	1467 aa		50.91	■■■■■ 5.74
EPB41L3-231	ENST00000584015	SUPT5H	O00267	1087 aa	Known RBP	50.91	■■■■■ 5.74
EPB41L3-231	ENST00000584015	FGD5	Q6ZNL6	1462 aa		50.89	■■■■■ 5.74
EPB41L3-231	ENST00000584015	CUX1	P39880	1505 aa		50.88	■■■■■ 5.74
EPB41L3-231	ENST00000584015	SOGA1	O94964	1423 aa		50.87	■■■■■ 5.73
EPB41L3-231	ENST00000584015	RIMBP3C	A6NJZ7	1639 aa		50.85	■■■■■ 5.73
EPB41L3-231	ENST00000584015	RIMBP3B	A6NNM3	1639 aa		50.85	■■■■■ 5.73
EPB41L3-231	ENST00000584015	RIMBP3	Q9UFD9	1639 aa		50.85	■■■■■ 5.73
EPB41L3-231	ENST00000584015	WDR97	A6NE52	1622 aa		50.8	■■■■■ 5.72
EPB41L3-231	ENST00000584015	TDRD9	Q8NDG6	1382 aa	Known RBP	50.7	■■■■■ 5.71
EPB41L3-231	ENST00000584015	ARHGEF11	O15085	1522 aa		50.68	■■■■■ 5.7
EPB41L3-231	ENST00000584015	FBLN2	P98095	1184 aa		50.58	■■■■■ 5.69
EPB41L3-231	ENST00000584015	SNAPC4	Q5SXM2	1469 aa		50.56	■■■■■ 5.68
EPB41L3-231	ENST00000584015	MAGI1	Q96QZ7	1491 aa	Predicted RBP	50.46	■■■■■ 5.67
EPB41L3-231	ENST00000584015	PBRM1	Q86U86	1689 aa		50.45	■■■■■ 5.67
EPB41L3-231	ENST00000584015	GRIN2B	Q13224	1484 aa		50.45	■■■■■ 5.67
EPB41L3-231	ENST00000584015	ABCA10	Q8WWZ4	1543 aa		50.32	■■■■■ 5.65
EPB41L3-231	ENST00000584015	GAPVD1	Q14C86	1478 aa		50.31	■■■■■ 5.64
EPB41L3-231	ENST00000584015	ABCA5	Q8WWZ7	1642 aa		50.3	■■■■■ 5.64
EPB41L3-231	ENST00000584015	SYNJ1	O43426	1573 aa		50.29	■■■■■ 5.64
EPB41L3-231	ENST00000584015	SYNJ2	O15056	1496 aa		50.26	■■■■■ 5.64
EPB41L3-231	ENST00000584015	BIVM-ERCC5	R4GMW8	1640 aa		50.25	■■■■■ 5.64
EPB41L3-231	ENST00000584015	CHMP7	Q8WUX9	453 aa	Predicted RBP	50.25	■■■■■ 5.63
EPB41L3-231	ENST00000584015	CLASP1	Q7Z460	1538 aa		50.25	■■■■■ 5.63
EPB41L3-231	ENST00000584015	TOP2B	Q02880	1626 aa		50.21	■■■■■ 5.63
EPB41L3-231	ENST00000584015	ARAP1	Q96P48	1450 aa		50.18	■■■■■ 5.62
EPB41L3-231	ENST00000584015	WRN	Q14191	1432 aa	Predicted RBP eCLIP	50.15	■■■■■ 5.62
EPB41L3-231	ENST00000584015	CYB5RL	Q6IPT4	315 aa		50.14	■■■■■ 5.62
EPB41L3-231	ENST00000584015	ADAMTS12	P58397	1594 aa		49.91	■■■■■ 5.58
EPB41L3-231	ENST00000584015	GRIN2A	Q12879	1464 aa		49.82	■■■■■ 5.57
EPB41L3-231	ENST00000584015	ERICH3	Q5RHP9	1530 aa		49.73	■■■■■ 5.55
EPB41L3-231	ENST00000584015	FHAD1	B1AJZ9	1412 aa		49.67	■■■■■ 5.54
EPB41L3-231	ENST00000584015	CEP170	Q5SW79	1584 aa		49.66	■■■■■ 5.54
EPB41L3-231	ENST00000584015	NUP160	Q12769	1436 aa		49.6	■■■■■ 5.53
EPB41L3-231	ENST00000584015	TRH	P20396	242 aa	Predicted RBP	49.54	■■■■■ 5.52
EPB41L3-231	ENST00000584015	SHROOM2	Q13796	1616 aa		49.45	■■■■■ 5.51
EPB41L3-231	ENST00000584015	ERCC6L2	Q5T890	1561 aa		49.45	■■■■■ 5.51
EPB41L3-231	ENST00000584015	RUSC2	Q8N2Y8	1516 aa		49.21	■■■■■ 5.47
EPB41L3-231	ENST00000584015	CUL7	Q14999	1698 aa		49.16	■■■■■ 5.46
EPB41L3-231	ENST00000584015	KIF27	Q86VH2	1401 aa		49.16	■■■■■ 5.46
EPB41L3-231	ENST00000584015	PRG4	Q92954	1404 aa	Predicted RBP	49.09	■■■■■ 5.45

Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms