RNA–Protein interactions for RNA: ENST00000583998.1

KSR1-219, Transcript of kinase suppressor of ras 1, humanhuman

TSL 3

Gene KSR1, Length 339 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KSR1-219ENST00000583998 NISCHQ9Y2I1 1504 aa26.23■■□□□ 1.79
KSR1-219ENST00000583998 CCDC180Q9P1Z9 1646 aa23.42■■□□□ 1.34
KSR1-219ENST00000583998 ABCC9O60706 1549 aa23.23■■□□□ 1.31
KSR1-219ENST00000583998 RB1CC1Q8TDY2 1594 aa22.22■■□□□ 1.15
KSR1-219ENST00000583998 DCAF8L2P0C7V8 631 aa22.14■■□□□ 1.13
KSR1-219ENST00000583998 NACADO15069 1562 aa22.12■■□□□ 1.13
KSR1-219ENST00000583998 MYO15BQ96JP2 1530 aa21.87■■□□□ 1.09
KSR1-219ENST00000583998 ZCCHC6Q5VYS8 1495 aaKnown RBP21.78■■□□□ 1.08
KSR1-219ENST00000583998 PABPN1Q86U42 306 aaKnown RBP eCLIP21.69■■□□□ 1.06
KSR1-219ENST00000583998 DCAF1Q9Y4B6 1507 aa21.68■■□□□ 1.06
KSR1-219ENST00000583998 UNC13AQ9UPW8 1703 aa21.63■■□□□ 1.05
KSR1-219ENST00000583998 DNAJC5BQ9UF47 199 aa21.53■■□□□ 1.04
KSR1-219ENST00000583998 BICRAQ9NZM4 1560 aa21.49■■□□□ 1.03
KSR1-219ENST00000583998 SCRIBQ14160 1630 aa21.38■■□□□ 1.01
KSR1-219ENST00000583998 SHROOM4Q9ULL8 1493 aa21.3■■□□□ 1
KSR1-219ENST00000583998 EIF4G1Q04637 1599 aaKnown RBP21■□□□□ 0.95
KSR1-219ENST00000583998 CC2D2AQ9P2K1 1620 aa20.97■□□□□ 0.95
KSR1-219ENST00000583998 CECR2Q9BXF3 1484 aa20.92■□□□□ 0.94
KSR1-219ENST00000583998 NCAPD3P42695 1498 aa20.41■□□□□ 0.86
KSR1-219ENST00000583998 SMARCA4P51532 1647 aa20.4■□□□□ 0.86
KSR1-219ENST00000583998 ATAD2BQ9ULI0 1458 aa20.37■□□□□ 0.85
KSR1-219ENST00000583998 BAZ1AQ9NRL2 1556 aaPredicted RBP20.37■□□□□ 0.85
KSR1-219ENST00000583998 SMARCA2P51531 1590 aa20.36■□□□□ 0.85
KSR1-219ENST00000583998 HMGXB3Q12766 1538 aa20.27■□□□□ 0.84
KSR1-219ENST00000583998 BAZ1BQ9UIG0 1483 aaKnown RBP20.23■□□□□ 0.83
KSR1-219ENST00000583998 MROH2BQ7Z745 1585 aa20.2■□□□□ 0.82
KSR1-219ENST00000583998 PEG3Q9GZU2 1588 aa20.19■□□□□ 0.82
KSR1-219ENST00000583998 ERCC6Q03468 1493 aa20.1■□□□□ 0.81
KSR1-219ENST00000583998 NESP48681 1621 aa19.99■□□□□ 0.79
KSR1-219ENST00000583998 WIZO95785 1651 aa19.96■□□□□ 0.79
KSR1-219ENST00000583998 CUX2O14529 1486 aa19.93■□□□□ 0.78
KSR1-219ENST00000583998 LAMC3Q9Y6N6 1575 aa19.91■□□□□ 0.78
KSR1-219ENST00000583998 RSF1Q96T23 1441 aaPredicted RBP19.88■□□□□ 0.77
KSR1-219ENST00000583998 PDS5BQ9NTI5 1447 aa19.84■□□□□ 0.77
KSR1-219ENST00000583998 CADPSQ9ULU8 1353 aa19.83■□□□□ 0.76
KSR1-219ENST00000583998 TOP2AP11388 1531 aaKnown RBP19.76■□□□□ 0.75
KSR1-219ENST00000583998 KIF21AQ7Z4S6 1674 aa19.73■□□□□ 0.75
KSR1-219ENST00000583998 THOC2Q8NI27 1593 aaKnown RBP19.73■□□□□ 0.75
KSR1-219ENST00000583998 DNAJC5Q9H3Z4 198 aa19.66■□□□□ 0.74
KSR1-219ENST00000583998 CFTRP13569 1480 aa19.62■□□□□ 0.73
KSR1-219ENST00000583998 MRC2Q9UBG0 1479 aa19.62■□□□□ 0.73
KSR1-219ENST00000583998 CEP164Q9UPV0 1460 aa19.6■□□□□ 0.73
KSR1-219ENST00000583998 FANCD2Q9BXW9 1451 aa19.6■□□□□ 0.73
KSR1-219ENST00000583998 WDR62O43379 1518 aa19.55■□□□□ 0.72
KSR1-219ENST00000583998 CCDC88BA6NC98 1476 aa19.53■□□□□ 0.72
KSR1-219ENST00000583998 PRDM2Q13029 1718 aa19.4■□□□□ 0.7
KSR1-219ENST00000583998 URB2Q14146 1524 aaKnown RBP19.38■□□□□ 0.69
KSR1-219ENST00000583998 ABCC8Q09428 1581 aa19.25■□□□□ 0.67
KSR1-219ENST00000583998 SUPT5HO00267 1087 aaKnown RBP19.25■□□□□ 0.67
KSR1-219ENST00000583998 TOPBP1Q92547 1522 aa19.23■□□□□ 0.67
KSR1-219ENST00000583998 IFT140Q96RY7 1462 aa19.21■□□□□ 0.67
KSR1-219ENST00000583998 DNMBPQ6XZF7 1577 aa19.19■□□□□ 0.66
KSR1-219ENST00000583998 ZNF608Q9ULD9 1512 aaPredicted RBP19.11■□□□□ 0.65
KSR1-219ENST00000583998 OSCARQ8IYS5 282 aa19.1■□□□□ 0.65
KSR1-219ENST00000583998 POLA1P09884 1462 aaPredicted RBP19.05■□□□□ 0.64
KSR1-219ENST00000583998 EIF4G3O43432 1585 aaKnown RBP19.02■□□□□ 0.64
KSR1-219ENST00000583998 TARBP1Q13395 1621 aaKnown RBP19.01■□□□□ 0.63
KSR1-219ENST00000583998 SOGA1O94964 1423 aa19■□□□□ 0.63
KSR1-219ENST00000583998 AQRO60306 1485 aaKnown RBP eCLIP18.98■□□□□ 0.635e-12■■■□□ 17.8
KSR1-219ENST00000583998 FGD5Q6ZNL6 1462 aa18.97■□□□□ 0.63
KSR1-219ENST00000583998 RAD54L2Q9Y4B4 1467 aa18.97■□□□□ 0.63
KSR1-219ENST00000583998 CUX1P39880 1505 aa18.97■□□□□ 0.63
KSR1-219ENST00000583998 TRIM41Q8WV44 630 aa18.95■□□□□ 0.62
KSR1-219ENST00000583998 TDRD9Q8NDG6 1382 aaKnown RBP18.93■□□□□ 0.62
KSR1-219ENST00000583998 FBLN2P98095 1184 aa18.89■□□□□ 0.61
KSR1-219ENST00000583998 WDR97A6NE52 1622 aa18.88■□□□□ 0.61
KSR1-219ENST00000583998 CHD1O14646 1710 aa18.82■□□□□ 0.6
KSR1-219ENST00000583998 GRIN2BQ13224 1484 aa18.81■□□□□ 0.6
KSR1-219ENST00000583998 SNAPC4Q5SXM2 1469 aa18.8■□□□□ 0.6
KSR1-219ENST00000583998 WRNQ14191 1432 aaPredicted RBP eCLIP18.79■□□□□ 0.6
KSR1-219ENST00000583998 CHMP7Q8WUX9 453 aaPredicted RBP18.78■□□□□ 0.6
KSR1-219ENST00000583998 MAGI1Q96QZ7 1491 aaPredicted RBP18.77■□□□□ 0.6
KSR1-219ENST00000583998 GAPVD1Q14C86 1478 aa18.77■□□□□ 0.59
KSR1-219ENST00000583998 ABCA10Q8WWZ4 1543 aa18.76■□□□□ 0.59
KSR1-219ENST00000583998 RIMBP3CA6NJZ7 1639 aa18.76■□□□□ 0.59
KSR1-219ENST00000583998 RIMBP3BA6NNM3 1639 aa18.76■□□□□ 0.59
KSR1-219ENST00000583998 RIMBP3Q9UFD9 1639 aa18.76■□□□□ 0.59
KSR1-219ENST00000583998 ARHGEF11O15085 1522 aa18.75■□□□□ 0.59
KSR1-219ENST00000583998 TOP2BQ02880 1626 aa18.74■□□□□ 0.59
KSR1-219ENST00000583998 BIVM-ERCC5R4GMW8 1640 aa18.72■□□□□ 0.59
KSR1-219ENST00000583998 SYNJ2O15056 1496 aa18.71■□□□□ 0.59
KSR1-219ENST00000583998 SYNJ1O43426 1573 aa18.71■□□□□ 0.59
KSR1-219ENST00000583998 PBRM1Q86U86 1689 aa18.69■□□□□ 0.58
KSR1-219ENST00000583998 ABCA5Q8WWZ7 1642 aa18.69■□□□□ 0.58
KSR1-219ENST00000583998 CYB5RLQ6IPT4 315 aa18.64■□□□□ 0.57
KSR1-219ENST00000583998 CLASP1Q7Z460 1538 aa18.61■□□□□ 0.57
KSR1-219ENST00000583998 ARAP1Q96P48 1450 aa18.56■□□□□ 0.56
KSR1-219ENST00000583998 GRIN2AQ12879 1464 aa18.55■□□□□ 0.56
KSR1-219ENST00000583998 ADAMTS12P58397 1594 aa18.55■□□□□ 0.56
KSR1-219ENST00000583998 ERICH3Q5RHP9 1530 aa18.54■□□□□ 0.56
KSR1-219ENST00000583998 FHAD1B1AJZ9 1412 aa18.54■□□□□ 0.56
KSR1-219ENST00000583998 NUP160Q12769 1436 aa18.47■□□□□ 0.55
KSR1-219ENST00000583998 CEP170Q5SW79 1584 aa18.44■□□□□ 0.54
KSR1-219ENST00000583998 KIF27Q86VH2 1401 aa18.44■□□□□ 0.54
KSR1-219ENST00000583998 TRHP20396 242 aaPredicted RBP18.39■□□□□ 0.53
KSR1-219ENST00000583998 IGF1RP08069 1367 aa18.36■□□□□ 0.53
KSR1-219ENST00000583998 SHROOM2Q13796 1616 aa18.33■□□□□ 0.52
KSR1-219ENST00000583998 ERCC6L2Q5T890 1561 aa18.32■□□□□ 0.52
KSR1-219ENST00000583998 CUL7Q14999 1698 aa18.31■□□□□ 0.52
KSR1-219ENST00000583998 JPH4Q96JJ6 628 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms