RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 NISCHQ9Y2I1 1504 aa29.43■■■□□ 2.3
NUP85-224ENST00000583948 ABCC9O60706 1549 aa27.56■■■□□ 2
NUP85-224ENST00000583948 DNAJC5BQ9UF47 199 aa26.61■■□□□ 1.85
NUP85-224ENST00000583948 CCDC180Q9P1Z9 1646 aa26.57■■□□□ 1.84
NUP85-224ENST00000583948 RB1CC1Q8TDY2 1594 aa25.68■■□□□ 1.7
NUP85-224ENST00000583948 PABPN1Q86U42 306 aaKnown RBP eCLIP25.65■■□□□ 1.7
NUP85-224ENST00000583948 DCAF8L2P0C7V8 631 aa25.4■■□□□ 1.66
NUP85-224ENST00000583948 UNC13AQ9UPW8 1703 aa25.3■■□□□ 1.64
NUP85-224ENST00000583948 NACADO15069 1562 aa25.29■■□□□ 1.64
NUP85-224ENST00000583948 BICRAQ9NZM4 1560 aa25.13■■□□□ 1.61
NUP85-224ENST00000583948 CECR2Q9BXF3 1484 aa24.78■■□□□ 1.56
NUP85-224ENST00000583948 CC2D2AQ9P2K1 1620 aa24.77■■□□□ 1.56
NUP85-224ENST00000583948 DNAJC5Q9H3Z4 198 aa24.71■■□□□ 1.55
NUP85-224ENST00000583948 MYO15BQ96JP2 1530 aa24.58■■□□□ 1.53
NUP85-224ENST00000583948 EIF4G1Q04637 1599 aaKnown RBP24.5■■□□□ 1.51
NUP85-224ENST00000583948 SCRIBQ14160 1630 aa24.44■■□□□ 1.5
NUP85-224ENST00000583948 SHROOM4Q9ULL8 1493 aa24.32■■□□□ 1.48
NUP85-224ENST00000583948 ZCCHC6Q5VYS8 1495 aaKnown RBP24.21■■□□□ 1.47
NUP85-224ENST00000583948 DCAF1Q9Y4B6 1507 aa24.07■■□□□ 1.44
NUP85-224ENST00000583948 CUX2O14529 1486 aa23.77■■□□□ 1.4
NUP85-224ENST00000583948 ERCC6Q03468 1493 aa23.71■■□□□ 1.39
NUP85-224ENST00000583948 NESP48681 1621 aa23.53■■□□□ 1.36
NUP85-224ENST00000583948 TRIM41Q8WV44 630 aa23.52■■□□□ 1.36
NUP85-224ENST00000583948 NCAPD3P42695 1498 aa23.41■■□□□ 1.34
NUP85-224ENST00000583948 ATAD2BQ9ULI0 1458 aa23.32■■□□□ 1.32
NUP85-224ENST00000583948 THOC2Q8NI27 1593 aaKnown RBP23.27■■□□□ 1.32
NUP85-224ENST00000583948 SMARCA2P51531 1590 aa23.19■■□□□ 1.3
NUP85-224ENST00000583948 HMGXB3Q12766 1538 aa23.13■■□□□ 1.29
NUP85-224ENST00000583948 SMARCA4P51532 1647 aa23.12■■□□□ 1.29
NUP85-224ENST00000583948 KIF21AQ7Z4S6 1674 aa23.12■■□□□ 1.29
NUP85-224ENST00000583948 BAZ1BQ9UIG0 1483 aaKnown RBP23.04■■□□□ 1.28
NUP85-224ENST00000583948 LAMC3Q9Y6N6 1575 aa22.96■■□□□ 1.27
NUP85-224ENST00000583948 PDS5BQ9NTI5 1447 aa22.85■■□□□ 1.25
NUP85-224ENST00000583948 BAZ1AQ9NRL2 1556 aaPredicted RBP22.81■■□□□ 1.24
NUP85-224ENST00000583948 MROH2BQ7Z745 1585 aa22.8■■□□□ 1.24
NUP85-224ENST00000583948 PEG3Q9GZU2 1588 aa22.77■■□□□ 1.24
NUP85-224ENST00000583948 MRC2Q9UBG0 1479 aa22.77■■□□□ 1.24
NUP85-224ENST00000583948 WDR62O43379 1518 aa22.72■■□□□ 1.23
NUP85-224ENST00000583948 CADPSQ9ULU8 1353 aa22.7■■□□□ 1.22
NUP85-224ENST00000583948 OSCARQ8IYS5 282 aa22.68■■□□□ 1.22
NUP85-224ENST00000583948 RIMBP3CA6NJZ7 1639 aa22.55■■□□□ 1.2
NUP85-224ENST00000583948 RIMBP3BA6NNM3 1639 aa22.55■■□□□ 1.2
NUP85-224ENST00000583948 RIMBP3Q9UFD9 1639 aa22.55■■□□□ 1.2
NUP85-224ENST00000583948 CEP164Q9UPV0 1460 aa22.54■■□□□ 1.2
NUP85-224ENST00000583948 WIZO95785 1651 aa22.52■■□□□ 1.2
NUP85-224ENST00000583948 FANCD2Q9BXW9 1451 aa22.5■■□□□ 1.19
NUP85-224ENST00000583948 URB2Q14146 1524 aaKnown RBP22.42■■□□□ 1.18
NUP85-224ENST00000583948 ARHGEF11O15085 1522 aa22.36■■□□□ 1.17
NUP85-224ENST00000583948 CYB5RLQ6IPT4 315 aa22.34■■□□□ 1.17
NUP85-224ENST00000583948 ZNF608Q9ULD9 1512 aaPredicted RBP22.32■■□□□ 1.16
NUP85-224ENST00000583948 TRHP20396 242 aaPredicted RBP22.31■■□□□ 1.16
NUP85-224ENST00000583948 CFTRP13569 1480 aa22.28■■□□□ 1.16
NUP85-224ENST00000583948 ARAP1Q96P48 1450 aa22.14■■□□□ 1.13
NUP85-224ENST00000583948 AEBP2Q6ZN18 517 aaPredicted RBP22.09■■□□□ 1.13
NUP85-224ENST00000583948 CHD1O14646 1710 aa22.08■■□□□ 1.12
NUP85-224ENST00000583948 IFT140Q96RY7 1462 aa22.07■■□□□ 1.12
NUP85-224ENST00000583948 EIF4G3O43432 1585 aaKnown RBP22.05■■□□□ 1.12
NUP85-224ENST00000583948 FBLN2P98095 1184 aa22.04■■□□□ 1.12
NUP85-224ENST00000583948 AQRO60306 1485 aaKnown RBP eCLIP22.02■■□□□ 1.121e-6■■■■□ 21.1
NUP85-224ENST00000583948 TOP2AP11388 1531 aaKnown RBP22.01■■□□□ 1.11
NUP85-224ENST00000583948 RSF1Q96T23 1441 aaPredicted RBP22.01■■□□□ 1.11
NUP85-224ENST00000583948 TOPBP1Q92547 1522 aa22.01■■□□□ 1.11
NUP85-224ENST00000583948 PRDM2Q13029 1718 aa21.97■■□□□ 1.11
NUP85-224ENST00000583948 CCDC88BA6NC98 1476 aa21.88■■□□□ 1.09
NUP85-224ENST00000583948 TARBP1Q13395 1621 aaKnown RBP21.87■■□□□ 1.09
NUP85-224ENST00000583948 DNMBPQ6XZF7 1577 aa21.8■■□□□ 1.08
NUP85-224ENST00000583948 RAD54L2Q9Y4B4 1467 aa21.8■■□□□ 1.08
NUP85-224ENST00000583948 TDRD9Q8NDG6 1382 aaKnown RBP21.78■■□□□ 1.08
NUP85-224ENST00000583948 POLA1P09884 1462 aaPredicted RBP21.74■■□□□ 1.07
NUP85-224ENST00000583948 CLASP1Q7Z460 1538 aa21.72■■□□□ 1.07
NUP85-224ENST00000583948 SNAPC4Q5SXM2 1469 aa21.71■■□□□ 1.07
NUP85-224ENST00000583948 ABCC8Q09428 1581 aa21.69■■□□□ 1.06
NUP85-224ENST00000583948 CHMP7Q8WUX9 453 aaPredicted RBP21.64■■□□□ 1.05
NUP85-224ENST00000583948 SOGA1O94964 1423 aa21.63■■□□□ 1.05
NUP85-224ENST00000583948 SYNJ1O43426 1573 aa21.57■■□□□ 1.04
NUP85-224ENST00000583948 GAPVD1Q14C86 1478 aa21.56■■□□□ 1.04
NUP85-224ENST00000583948 ERCC6L2Q5T890 1561 aa21.54■■□□□ 1.04
NUP85-224ENST00000583948 FGD5Q6ZNL6 1462 aa21.52■■□□□ 1.04
NUP85-224ENST00000583948 SYNJ2O15056 1496 aa21.45■■□□□ 1.03
NUP85-224ENST00000583948 MAGI1Q96QZ7 1491 aaPredicted RBP21.45■■□□□ 1.03
NUP85-224ENST00000583948 GRIN2BQ13224 1484 aa21.45■■□□□ 1.02
NUP85-224ENST00000583948 CUX1P39880 1505 aa21.43■■□□□ 1.02
NUP85-224ENST00000583948 PBRM1Q86U86 1689 aa21.4■■□□□ 1.02
NUP85-224ENST00000583948 WDR97A6NE52 1622 aa21.36■■□□□ 1.01
NUP85-224ENST00000583948 ILDR1Q86SU0 546 aaPredicted RBP21.34■■□□□ 1.01
NUP85-224ENST00000583948 KIF13AQ9H1H9 1805 aa21.34■■□□□ 1.01
NUP85-224ENST00000583948 CEP170Q5SW79 1584 aa21.27■■□□□ 1
NUP85-224ENST00000583948 KDM4FA0A1W2PPD8 638 aa21.24■□□□□ 0.99
NUP85-224ENST00000583948 ABCA5Q8WWZ7 1642 aa21.22■□□□□ 0.99
NUP85-224ENST00000583948 GRIN2AQ12879 1464 aa21.2■□□□□ 0.98
NUP85-224ENST00000583948 FAM69CQ0P6D2 419 aa21.16■□□□□ 0.98
NUP85-224ENST00000583948 ABCA10Q8WWZ4 1543 aa21.14■□□□□ 0.97
NUP85-224ENST00000583948 NUP160Q12769 1436 aa21.13■□□□□ 0.97
NUP85-224ENST00000583948 SHROOM2Q13796 1616 aa21.12■□□□□ 0.97
NUP85-224ENST00000583948 ADAMTS12P58397 1594 aa21.11■□□□□ 0.97
NUP85-224ENST00000583948 PRG4Q92954 1404 aaPredicted RBP21.07■□□□□ 0.96
NUP85-224ENST00000583948 TSPOAP1O95153 1857 aa21.05■□□□□ 0.96
NUP85-224ENST00000583948 ABCC10Q5T3U5 1492 aa21.03■□□□□ 0.96
NUP85-224ENST00000583948 DIP2BQ9P265 1576 aa21■□□□□ 0.95
NUP85-224ENST00000583948 KDM6BO15054 1643 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms