RNA–Protein interactions for RNA: ENST00000583691.1

LINC01887-201, Transcript of long intergenic non-protein coding RNA 1887, humanhuman

TSL 5

Gene LINC01887, Length 631 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01887-201ENST00000583691 NISCHQ9Y2I1 1504 aa37.9■■■■□ 3.66
LINC01887-201ENST00000583691 CCDC180Q9P1Z9 1646 aa34.15■■■■□ 3.06
LINC01887-201ENST00000583691 ABCC9O60706 1549 aa34.06■■■■□ 3.04
LINC01887-201ENST00000583691 RB1CC1Q8TDY2 1594 aa32.48■■■□□ 2.79
LINC01887-201ENST00000583691 NACADO15069 1562 aa32.23■■■□□ 2.75
LINC01887-201ENST00000583691 DCAF8L2P0C7V8 631 aa31.92■■■□□ 2.7
LINC01887-201ENST00000583691 DNAJC5BQ9UF47 199 aa31.85■■■□□ 2.69
LINC01887-201ENST00000583691 UNC13AQ9UPW8 1703 aa31.79■■■□□ 2.68
LINC01887-201ENST00000583691 MYO15BQ96JP2 1530 aa31.76■■■□□ 2.68
LINC01887-201ENST00000583691 PABPN1Q86U42 306 aaKnown RBP eCLIP31.62■■■□□ 2.65
LINC01887-201ENST00000583691 BICRAQ9NZM4 1560 aa31.47■■■□□ 2.63
LINC01887-201ENST00000583691 ZCCHC6Q5VYS8 1495 aaKnown RBP31.42■■■□□ 2.62
LINC01887-201ENST00000583691 DCAF1Q9Y4B6 1507 aa31.34■■■□□ 2.61
LINC01887-201ENST00000583691 SHROOM4Q9ULL8 1493 aa31.14■■■□□ 2.57
LINC01887-201ENST00000583691 SCRIBQ14160 1630 aa31.06■■■□□ 2.56
LINC01887-201ENST00000583691 CC2D2AQ9P2K1 1620 aa30.81■■■□□ 2.52
LINC01887-201ENST00000583691 EIF4G1Q04637 1599 aaKnown RBP30.74■■■□□ 2.51
LINC01887-201ENST00000583691 CECR2Q9BXF3 1484 aa30.7■■■□□ 2.5
LINC01887-201ENST00000583691 NCAPD3P42695 1498 aa29.69■■■□□ 2.34
LINC01887-201ENST00000583691 SMARCA4P51532 1647 aa29.62■■■□□ 2.33
LINC01887-201ENST00000583691 ATAD2BQ9ULI0 1458 aa29.6■■■□□ 2.33
LINC01887-201ENST00000583691 SMARCA2P51531 1590 aa29.59■■■□□ 2.33
LINC01887-201ENST00000583691 HMGXB3Q12766 1538 aa29.55■■■□□ 2.32
LINC01887-201ENST00000583691 BAZ1AQ9NRL2 1556 aaPredicted RBP29.47■■■□□ 2.31
LINC01887-201ENST00000583691 ERCC6Q03468 1493 aa29.47■■■□□ 2.31
LINC01887-201ENST00000583691 CUX2O14529 1486 aa29.42■■■□□ 2.3
LINC01887-201ENST00000583691 BAZ1BQ9UIG0 1483 aaKnown RBP29.36■■■□□ 2.29
LINC01887-201ENST00000583691 DNAJC5Q9H3Z4 198 aa29.34■■■□□ 2.29
LINC01887-201ENST00000583691 PEG3Q9GZU2 1588 aa29.33■■■□□ 2.29
LINC01887-201ENST00000583691 NESP48681 1621 aa29.23■■■□□ 2.27
LINC01887-201ENST00000583691 MROH2BQ7Z745 1585 aa29.18■■■□□ 2.26
LINC01887-201ENST00000583691 LAMC3Q9Y6N6 1575 aa29.11■■■□□ 2.25
LINC01887-201ENST00000583691 THOC2Q8NI27 1593 aaKnown RBP29.03■■■□□ 2.24
LINC01887-201ENST00000583691 KIF21AQ7Z4S6 1674 aa28.96■■■□□ 2.23
LINC01887-201ENST00000583691 PDS5BQ9NTI5 1447 aa28.89■■■□□ 2.22
LINC01887-201ENST00000583691 WIZO95785 1651 aa28.87■■■□□ 2.21
LINC01887-201ENST00000583691 CADPSQ9ULU8 1353 aa28.77■■■□□ 2.2
LINC01887-201ENST00000583691 MRC2Q9UBG0 1479 aa28.66■■■□□ 2.18
LINC01887-201ENST00000583691 WDR62O43379 1518 aa28.61■■■□□ 2.17
LINC01887-201ENST00000583691 CEP164Q9UPV0 1460 aa28.56■■■□□ 2.16
LINC01887-201ENST00000583691 RSF1Q96T23 1441 aaPredicted RBP28.53■■■□□ 2.16
LINC01887-201ENST00000583691 TOP2AP11388 1531 aaKnown RBP28.53■■■□□ 2.16
LINC01887-201ENST00000583691 FANCD2Q9BXW9 1451 aa28.49■■■□□ 2.15
LINC01887-201ENST00000583691 CFTRP13569 1480 aa28.46■■■□□ 2.15
LINC01887-201ENST00000583691 PRDM2Q13029 1718 aa28.35■■■□□ 2.13
LINC01887-201ENST00000583691 URB2Q14146 1524 aaKnown RBP28.24■■■□□ 2.11
LINC01887-201ENST00000583691 CCDC88BA6NC98 1476 aa28.13■■■□□ 2.09
LINC01887-201ENST00000583691 TRIM41Q8WV44 630 aa28.06■■■□□ 2.08
LINC01887-201ENST00000583691 OSCARQ8IYS5 282 aa27.98■■■□□ 2.07
LINC01887-201ENST00000583691 IFT140Q96RY7 1462 aa27.97■■■□□ 2.07
LINC01887-201ENST00000583691 TOPBP1Q92547 1522 aa27.94■■■□□ 2.06
LINC01887-201ENST00000583691 ABCC8Q09428 1581 aa27.91■■■□□ 2.06
LINC01887-201ENST00000583691 ZNF608Q9ULD9 1512 aaPredicted RBP27.88■■■□□ 2.05
LINC01887-201ENST00000583691 DNMBPQ6XZF7 1577 aa27.88■■■□□ 2.05
LINC01887-201ENST00000583691 EIF4G3O43432 1585 aaKnown RBP27.82■■■□□ 2.04
LINC01887-201ENST00000583691 RIMBP3CA6NJZ7 1639 aa27.72■■■□□ 2.03
LINC01887-201ENST00000583691 RIMBP3BA6NNM3 1639 aa27.72■■■□□ 2.03
LINC01887-201ENST00000583691 TARBP1Q13395 1621 aaKnown RBP27.72■■■□□ 2.03
LINC01887-201ENST00000583691 RIMBP3Q9UFD9 1639 aa27.72■■■□□ 2.03
LINC01887-201ENST00000583691 POLA1P09884 1462 aaPredicted RBP27.65■■■□□ 2.02
LINC01887-201ENST00000583691 CHD1O14646 1710 aa27.64■■■□□ 2.02
LINC01887-201ENST00000583691 ARHGEF11O15085 1522 aa27.62■■■□□ 2.01
LINC01887-201ENST00000583691 AQRO60306 1485 aaKnown RBP eCLIP27.6■■■□□ 2.01
LINC01887-201ENST00000583691 WDR97A6NE52 1622 aa27.51■■□□□ 1.99
LINC01887-201ENST00000583691 RAD54L2Q9Y4B4 1467 aa27.51■■□□□ 1.99
LINC01887-201ENST00000583691 SOGA1O94964 1423 aa27.5■■□□□ 1.99
LINC01887-201ENST00000583691 FGD5Q6ZNL6 1462 aa27.48■■□□□ 1.99
LINC01887-201ENST00000583691 CUX1P39880 1505 aa27.44■■□□□ 1.98
LINC01887-201ENST00000583691 FBLN2P98095 1184 aa27.43■■□□□ 1.98
LINC01887-201ENST00000583691 TDRD9Q8NDG6 1382 aaKnown RBP27.42■■□□□ 1.98
LINC01887-201ENST00000583691 SNAPC4Q5SXM2 1469 aa27.38■■□□□ 1.97
LINC01887-201ENST00000583691 MAGI1Q96QZ7 1491 aaPredicted RBP27.34■■□□□ 1.97
LINC01887-201ENST00000583691 CYB5RLQ6IPT4 315 aa27.32■■□□□ 1.96
LINC01887-201ENST00000583691 ARAP1Q96P48 1450 aa27.32■■□□□ 1.96
LINC01887-201ENST00000583691 GRIN2BQ13224 1484 aa27.31■■□□□ 1.96
LINC01887-201ENST00000583691 SYNJ1O43426 1573 aa27.29■■□□□ 1.96
LINC01887-201ENST00000583691 PBRM1Q86U86 1689 aa27.28■■□□□ 1.96
LINC01887-201ENST00000583691 CLASP1Q7Z460 1538 aa27.27■■□□□ 1.96
LINC01887-201ENST00000583691 CHMP7Q8WUX9 453 aaPredicted RBP27.23■■□□□ 1.95
LINC01887-201ENST00000583691 SYNJ2O15056 1496 aa27.23■■□□□ 1.95
LINC01887-201ENST00000583691 SUPT5HO00267 1087 aaKnown RBP27.2■■□□□ 1.94
LINC01887-201ENST00000583691 GAPVD1Q14C86 1478 aa27.19■■□□□ 1.94
LINC01887-201ENST00000583691 ABCA5Q8WWZ7 1642 aa27.18■■□□□ 1.94
LINC01887-201ENST00000583691 ABCA10Q8WWZ4 1543 aa27.17■■□□□ 1.94
LINC01887-201ENST00000583691 TRHP20396 242 aaPredicted RBP27.06■■□□□ 1.92
LINC01887-201ENST00000583691 BIVM-ERCC5R4GMW8 1640 aa27.05■■□□□ 1.92
LINC01887-201ENST00000583691 WRNQ14191 1432 aaPredicted RBP eCLIP27.05■■□□□ 1.92
LINC01887-201ENST00000583691 TOP2BQ02880 1626 aa27.03■■□□□ 1.92
LINC01887-201ENST00000583691 ADAMTS12P58397 1594 aa26.98■■□□□ 1.91
LINC01887-201ENST00000583691 GRIN2AQ12879 1464 aa26.96■■□□□ 1.91
LINC01887-201ENST00000583691 CEP170Q5SW79 1584 aa26.88■■□□□ 1.89
LINC01887-201ENST00000583691 ERICH3Q5RHP9 1530 aa26.85■■□□□ 1.89
LINC01887-201ENST00000583691 NUP160Q12769 1436 aa26.85■■□□□ 1.89
LINC01887-201ENST00000583691 FHAD1B1AJZ9 1412 aa26.84■■□□□ 1.89
LINC01887-201ENST00000583691 ERCC6L2Q5T890 1561 aa26.8■■□□□ 1.88
LINC01887-201ENST00000583691 SHROOM2Q13796 1616 aa26.79■■□□□ 1.88
LINC01887-201ENST00000583691 RUSC2Q8N2Y8 1516 aa26.61■■□□□ 1.85
LINC01887-201ENST00000583691 PRG4Q92954 1404 aaPredicted RBP26.57■■□□□ 1.84
LINC01887-201ENST00000583691 CUL7Q14999 1698 aa26.51■■□□□ 1.83
LINC01887-201ENST00000583691 JPH4Q96JJ6 628 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms