RNA–Protein interactions for RNA: ENST00000583677.1

PER1-216, Transcript of period circadian regulator 1, humanhuman

TSL 1 (best)

Gene PER1, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PER1-216ENST00000583677 NISCHQ9Y2I1 1504 aa31.6■■■□□ 2.65
PER1-216ENST00000583677 ABCC9O60706 1549 aa28.71■■■□□ 2.19
PER1-216ENST00000583677 CCDC180Q9P1Z9 1646 aa28.58■■■□□ 2.17
PER1-216ENST00000583677 RB1CC1Q8TDY2 1594 aa27.27■■□□□ 1.96
PER1-216ENST00000583677 DNAJC5BQ9UF47 199 aa27.08■■□□□ 1.93
PER1-216ENST00000583677 NACADO15069 1562 aa27.02■■□□□ 1.92
PER1-216ENST00000583677 UNC13AQ9UPW8 1703 aa26.73■■□□□ 1.87
PER1-216ENST00000583677 DCAF8L2P0C7V8 631 aa26.67■■□□□ 1.86
PER1-216ENST00000583677 PABPN1Q86U42 306 aaKnown RBP eCLIP26.61■■□□□ 1.85
PER1-216ENST00000583677 MYO15BQ96JP2 1530 aa26.56■■□□□ 1.84
PER1-216ENST00000583677 BICRAQ9NZM4 1560 aa26.48■■□□□ 1.83
PER1-216ENST00000583677 ZCCHC6Q5VYS8 1495 aaKnown RBP26.17■■□□□ 1.78
PER1-216ENST00000583677 SHROOM4Q9ULL8 1493 aa26.13■■□□□ 1.77
PER1-216ENST00000583677 DCAF1Q9Y4B6 1507 aa26.12■■□□□ 1.77
PER1-216ENST00000583677 CC2D2AQ9P2K1 1620 aa25.97■■□□□ 1.75
PER1-216ENST00000583677 SCRIBQ14160 1630 aa25.96■■□□□ 1.75
PER1-216ENST00000583677 CECR2Q9BXF3 1484 aa25.9■■□□□ 1.74
PER1-216ENST00000583677 EIF4G1Q04637 1599 aaKnown RBP25.86■■□□□ 1.73
PER1-216ENST00000583677 DNAJC5Q9H3Z4 198 aa25.08■■□□□ 1.61
PER1-216ENST00000583677 CUX2O14529 1486 aa24.9■■□□□ 1.58
PER1-216ENST00000583677 NCAPD3P42695 1498 aa24.89■■□□□ 1.58
PER1-216ENST00000583677 ERCC6Q03468 1493 aa24.83■■□□□ 1.56
PER1-216ENST00000583677 ATAD2BQ9ULI0 1458 aa24.79■■□□□ 1.56
PER1-216ENST00000583677 HMGXB3Q12766 1538 aa24.76■■□□□ 1.55
PER1-216ENST00000583677 SMARCA4P51532 1647 aa24.75■■□□□ 1.55
PER1-216ENST00000583677 SMARCA2P51531 1590 aa24.75■■□□□ 1.55
PER1-216ENST00000583677 NESP48681 1621 aa24.59■■□□□ 1.53
PER1-216ENST00000583677 BAZ1AQ9NRL2 1556 aaPredicted RBP24.58■■□□□ 1.52
PER1-216ENST00000583677 BAZ1BQ9UIG0 1483 aaKnown RBP24.56■■□□□ 1.52
PER1-216ENST00000583677 PEG3Q9GZU2 1588 aa24.52■■□□□ 1.52
PER1-216ENST00000583677 THOC2Q8NI27 1593 aaKnown RBP24.48■■□□□ 1.51
PER1-216ENST00000583677 LAMC3Q9Y6N6 1575 aa24.44■■□□□ 1.5
PER1-216ENST00000583677 KIF21AQ7Z4S6 1674 aa24.36■■□□□ 1.49
PER1-216ENST00000583677 MROH2BQ7Z745 1585 aa24.34■■□□□ 1.49
PER1-216ENST00000583677 PDS5BQ9NTI5 1447 aa24.25■■□□□ 1.47
PER1-216ENST00000583677 CADPSQ9ULU8 1353 aa24.11■■□□□ 1.45
PER1-216ENST00000583677 MRC2Q9UBG0 1479 aa24.08■■□□□ 1.45
PER1-216ENST00000583677 WIZO95785 1651 aa24.07■■□□□ 1.44
PER1-216ENST00000583677 WDR62O43379 1518 aa24.06■■□□□ 1.44
PER1-216ENST00000583677 CEP164Q9UPV0 1460 aa23.94■■□□□ 1.42
PER1-216ENST00000583677 TRIM41Q8WV44 630 aa23.87■■□□□ 1.41
PER1-216ENST00000583677 FANCD2Q9BXW9 1451 aa23.87■■□□□ 1.41
PER1-216ENST00000583677 CFTRP13569 1480 aa23.81■■□□□ 1.4
PER1-216ENST00000583677 TOP2AP11388 1531 aaKnown RBP23.76■■□□□ 1.39
PER1-216ENST00000583677 RSF1Q96T23 1441 aaPredicted RBP23.71■■□□□ 1.39
PER1-216ENST00000583677 PRDM2Q13029 1718 aa23.7■■□□□ 1.38
PER1-216ENST00000583677 URB2Q14146 1524 aaKnown RBP23.69■■□□□ 1.38
PER1-216ENST00000583677 OSCARQ8IYS5 282 aa23.62■■□□□ 1.37
PER1-216ENST00000583677 IFT140Q96RY7 1462 aa23.46■■□□□ 1.35
PER1-216ENST00000583677 RIMBP3CA6NJZ7 1639 aa23.45■■□□□ 1.34
PER1-216ENST00000583677 RIMBP3BA6NNM3 1639 aa23.45■■□□□ 1.34
PER1-216ENST00000583677 RIMBP3Q9UFD9 1639 aa23.45■■□□□ 1.34
PER1-216ENST00000583677 CCDC88BA6NC98 1476 aa23.43■■□□□ 1.34
PER1-216ENST00000583677 ZNF608Q9ULD9 1512 aaPredicted RBP23.43■■□□□ 1.34
PER1-216ENST00000583677 TOPBP1Q92547 1522 aa23.4■■□□□ 1.34
PER1-216ENST00000583677 EIF4G3O43432 1585 aaKnown RBP23.36■■□□□ 1.33
PER1-216ENST00000583677 ABCC8Q09428 1581 aa23.33■■□□□ 1.33
PER1-216ENST00000583677 ARHGEF11O15085 1522 aa23.33■■□□□ 1.32
PER1-216ENST00000583677 DNMBPQ6XZF7 1577 aa23.32■■□□□ 1.32
PER1-216ENST00000583677 CHD1O14646 1710 aa23.25■■□□□ 1.31
PER1-216ENST00000583677 TARBP1Q13395 1621 aaKnown RBP23.24■■□□□ 1.31
PER1-216ENST00000583677 AQRO60306 1485 aaKnown RBP eCLIP23.16■■□□□ 1.37e-7■■■■■ 40.9
PER1-216ENST00000583677 POLA1P09884 1462 aaPredicted RBP23.14■■□□□ 1.29
PER1-216ENST00000583677 CYB5RLQ6IPT4 315 aa23.08■■□□□ 1.29
PER1-216ENST00000583677 ARAP1Q96P48 1450 aa23.07■■□□□ 1.28
PER1-216ENST00000583677 WDR97A6NE52 1622 aa23.03■■□□□ 1.28
PER1-216ENST00000583677 RAD54L2Q9Y4B4 1467 aa23.03■■□□□ 1.28
PER1-216ENST00000583677 FBLN2P98095 1184 aa23.02■■□□□ 1.28
PER1-216ENST00000583677 SOGA1O94964 1423 aa22.99■■□□□ 1.27
PER1-216ENST00000583677 TDRD9Q8NDG6 1382 aaKnown RBP22.96■■□□□ 1.27
PER1-216ENST00000583677 SNAPC4Q5SXM2 1469 aa22.96■■□□□ 1.27
PER1-216ENST00000583677 FGD5Q6ZNL6 1462 aa22.96■■□□□ 1.27
PER1-216ENST00000583677 CLASP1Q7Z460 1538 aa22.94■■□□□ 1.26
PER1-216ENST00000583677 TRHP20396 242 aaPredicted RBP22.91■■□□□ 1.26
PER1-216ENST00000583677 SYNJ1O43426 1573 aa22.91■■□□□ 1.26
PER1-216ENST00000583677 CUX1P39880 1505 aa22.9■■□□□ 1.26
PER1-216ENST00000583677 MAGI1Q96QZ7 1491 aaPredicted RBP22.9■■□□□ 1.26
PER1-216ENST00000583677 GRIN2BQ13224 1484 aa22.85■■□□□ 1.25
PER1-216ENST00000583677 PBRM1Q86U86 1689 aa22.84■■□□□ 1.25
PER1-216ENST00000583677 SYNJ2O15056 1496 aa22.82■■□□□ 1.24
PER1-216ENST00000583677 CHMP7Q8WUX9 453 aaPredicted RBP22.82■■□□□ 1.24
PER1-216ENST00000583677 GAPVD1Q14C86 1478 aa22.73■■□□□ 1.23
PER1-216ENST00000583677 ABCA5Q8WWZ7 1642 aa22.73■■□□□ 1.23
PER1-216ENST00000583677 ABCA10Q8WWZ4 1543 aa22.68■■□□□ 1.22
PER1-216ENST00000583677 GRIN2AQ12879 1464 aa22.57■■□□□ 1.2
PER1-216ENST00000583677 ADAMTS12P58397 1594 aa22.57■■□□□ 1.2
PER1-216ENST00000583677 ERCC6L2Q5T890 1561 aa22.54■■□□□ 1.2
PER1-216ENST00000583677 CEP170Q5SW79 1584 aa22.52■■□□□ 1.2
PER1-216ENST00000583677 BIVM-ERCC5R4GMW8 1640 aa22.52■■□□□ 1.2
PER1-216ENST00000583677 WRNQ14191 1432 aaPredicted RBP eCLIP22.51■■□□□ 1.19
PER1-216ENST00000583677 NUP160Q12769 1436 aa22.49■■□□□ 1.19
PER1-216ENST00000583677 TOP2BQ02880 1626 aa22.49■■□□□ 1.19
PER1-216ENST00000583677 SHROOM2Q13796 1616 aa22.48■■□□□ 1.19
PER1-216ENST00000583677 AEBP2Q6ZN18 517 aaPredicted RBP22.45■■□□□ 1.18
PER1-216ENST00000583677 FHAD1B1AJZ9 1412 aa22.43■■□□□ 1.18
PER1-216ENST00000583677 ERICH3Q5RHP9 1530 aa22.41■■□□□ 1.18
PER1-216ENST00000583677 SUPT5HO00267 1087 aaKnown RBP22.4■■□□□ 1.18
PER1-216ENST00000583677 KIF13AQ9H1H9 1805 aa22.34■■□□□ 1.17
PER1-216ENST00000583677 PRG4Q92954 1404 aaPredicted RBP22.27■■□□□ 1.16
PER1-216ENST00000583677 RUSC2Q8N2Y8 1516 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms