RNA–Protein interactions for RNA: ENST00000583582.5

STARD3-223, Transcript of StAR related lipid transfer domain containing 3, human

TSL 2

Gene STARD3, Length 1,350 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STARD3-223	ENST00000583582	NISCH	Q9Y2I1	1504 aa		40.24	■■■■■ 4.03
STARD3-223	ENST00000583582	CCDC180	Q9P1Z9	1646 aa		35.15	■■■■□ 3.22
STARD3-223	ENST00000583582	ZCCHC6	Q5VYS8	1495 aa	Known RBP	33.88	■■■■□ 3.01
STARD3-223	ENST00000583582	DCAF1	Q9Y4B6	1507 aa		33.48	■■■□□ 2.95
STARD3-223	ENST00000583582	ABCC9	O60706	1549 aa		33.35	■■■□□ 2.93
STARD3-223	ENST00000583582	MYO15B	Q96JP2	1530 aa		33.06	■■■□□ 2.88
STARD3-223	ENST00000583582	DCAF8L2	P0C7V8	631 aa		32.71	■■■□□ 2.83
STARD3-223	ENST00000583582	NACAD	O15069	1562 aa		32.64	■■■□□ 2.82
STARD3-223	ENST00000583582	SHROOM4	Q9ULL8	1493 aa		32.55	■■■□□ 2.8
STARD3-223	ENST00000583582	RB1CC1	Q8TDY2	1594 aa		32.26	■■■□□ 2.75
STARD3-223	ENST00000583582	SCRIB	Q14160	1630 aa		32.04	■■■□□ 2.72
STARD3-223	ENST00000583582	UNC13A	Q9UPW8	1703 aa		31.53	■■■□□ 2.64
STARD3-223	ENST00000583582	SUPT5H	O00267	1087 aa	Known RBP	31.46	■■■□□ 2.63
STARD3-223	ENST00000583582	RSF1	Q96T23	1441 aa	Predicted RBP	31.22	■■■□□ 2.59
STARD3-223	ENST00000583582	PABPN1	Q86U42	306 aa	Known RBP eCLIP	31.2	■■■□□ 2.59
STARD3-223	ENST00000583582	BICRA	Q9NZM4	1560 aa		31.2	■■■□□ 2.58
STARD3-223	ENST00000583582	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	31.11	■■■□□ 2.57
STARD3-223	ENST00000583582	CECR2	Q9BXF3	1484 aa		31.07	■■■□□ 2.56
STARD3-223	ENST00000583582	MROH2B	Q7Z745	1585 aa		30.98	■■■□□ 2.55
STARD3-223	ENST00000583582	DNAJC5B	Q9UF47	199 aa		30.88	■■■□□ 2.53
STARD3-223	ENST00000583582	SMARCA4	P51532	1647 aa		30.88	■■■□□ 2.53
STARD3-223	ENST00000583582	WIZ	O95785	1651 aa		30.72	■■■□□ 2.51
STARD3-223	ENST00000583582	PEG3	Q9GZU2	1588 aa		30.64	■■■□□ 2.5
STARD3-223	ENST00000583582	TOP2A	P11388	1531 aa	Known RBP	30.56	■■■□□ 2.48
STARD3-223	ENST00000583582	CHIC1	Q5VXU3	224 aa		30.4	■■■□□ 2.46
STARD3-223	ENST00000583582	SMARCA2	P51531	1590 aa		30.39	■■■□□ 2.45
STARD3-223	ENST00000583582	ATAD2B	Q9ULI0	1458 aa		30.3	■■■□□ 2.44
STARD3-223	ENST00000583582	EIF4G1	Q04637	1599 aa	Known RBP	30.24	■■■□□ 2.43
STARD3-223	ENST00000583582	CCDC88B	A6NC98	1476 aa		30.14	■■■□□ 2.42
STARD3-223	ENST00000583582	BAZ1B	Q9UIG0	1483 aa	Known RBP	30.12	■■■□□ 2.41
STARD3-223	ENST00000583582	HMGXB3	Q12766	1538 aa		30.11	■■■□□ 2.41
STARD3-223	ENST00000583582	CC2D2A	Q9P2K1	1620 aa		30.11	■■■□□ 2.41
STARD3-223	ENST00000583582	NCAPD3	P42695	1498 aa		30.08	■■■□□ 2.41
STARD3-223	ENST00000583582	TRIM41	Q8WV44	630 aa		29.72	■■■□□ 2.35
STARD3-223	ENST00000583582	ABCC8	Q09428	1581 aa		29.46	■■■□□ 2.31
STARD3-223	ENST00000583582	CFTR	P13569	1480 aa		29.44	■■■□□ 2.3
STARD3-223	ENST00000583582	PRDM2	Q13029	1718 aa		29.41	■■■□□ 2.3
STARD3-223	ENST00000583582	WRN	Q14191	1432 aa	Predicted RBP eCLIP	29.4	■■■□□ 2.3
STARD3-223	ENST00000583582	EEA1	Q15075	1411 aa		29.28	■■■□□ 2.28
STARD3-223	ENST00000583582	CADPS	Q9ULU8	1353 aa		29.24	■■■□□ 2.27
STARD3-223	ENST00000583582	SYNJ1	O43426	1573 aa		29.23	■■■□□ 2.27
STARD3-223	ENST00000583582	TOP2B	Q02880	1626 aa		29.22	■■■□□ 2.27
STARD3-223	ENST00000583582	BIVM-ERCC5	R4GMW8	1640 aa		29.21	■■■□□ 2.27
STARD3-223	ENST00000583582	LAMC3	Q9Y6N6	1575 aa		29.05	■■■□□ 2.24
STARD3-223	ENST00000583582	LOC105371045	A0A1W2PR82	267 aa		29.04	■■■□□ 2.24
STARD3-223	ENST00000583582	CUX1	P39880	1505 aa		28.99	■■■□□ 2.23
STARD3-223	ENST00000583582	SOGA1	O94964	1423 aa		28.96	■■■□□ 2.23
STARD3-223	ENST00000583582	FAM9A	Q8IZU1	332 aa	Predicted RBP	28.95	■■■□□ 2.22
STARD3-223	ENST00000583582	FANCD2	Q9BXW9	1451 aa		28.9	■■■□□ 2.22
STARD3-223	ENST00000583582	CSRNP3	Q8WYN3	585 aa		28.86	■■■□□ 2.21
STARD3-223	ENST00000583582	KIF21B	O75037	1637 aa		28.82	■■■□□ 2.2
STARD3-223	ENST00000583582	RUSC2	Q8N2Y8	1516 aa		28.8	■■■□□ 2.2
STARD3-223	ENST00000583582	NES	P48681	1621 aa		28.8	■■■□□ 2.2
STARD3-223	ENST00000583582	DNMBP	Q6XZF7	1577 aa		28.76	■■■□□ 2.19
STARD3-223	ENST00000583582	PDS5B	Q9NTI5	1447 aa		28.76	■■■□□ 2.19
STARD3-223	ENST00000583582	CEP164	Q9UPV0	1460 aa		28.75	■■■□□ 2.19
STARD3-223	ENST00000583582	ERCC6	Q03468	1493 aa		28.74	■■■□□ 2.19
STARD3-223	ENST00000583582	GOLGA3	Q08378	1498 aa		28.74	■■■□□ 2.19
STARD3-223	ENST00000583582	TNIK	Q9UKE5	1360 aa		28.7	■■■□□ 2.19
STARD3-223	ENST00000583582	KIF27	Q86VH2	1401 aa		28.67	■■■□□ 2.18
STARD3-223	ENST00000583582	FGD5	Q6ZNL6	1462 aa		28.62	■■■□□ 2.17
STARD3-223	ENST00000583582	TOPBP1	Q92547	1522 aa		28.62	■■■□□ 2.17
STARD3-223	ENST00000583582	ERICH3	Q5RHP9	1530 aa		28.61	■■■□□ 2.17
STARD3-223	ENST00000583582	PRX	Q9BXM0	1461 aa		28.56	■■■□□ 2.16
STARD3-223	ENST00000583582	KIF21A	Q7Z4S6	1674 aa		28.51	■■■□□ 2.15
STARD3-223	ENST00000583582	URB2	Q14146	1524 aa	Known RBP	28.49	■■■□□ 2.15
STARD3-223	ENST00000583582	ABCA10	Q8WWZ4	1543 aa		28.49	■■■□□ 2.15
STARD3-223	ENST00000583582	CUX2	O14529	1486 aa		28.48	■■■□□ 2.15
STARD3-223	ENST00000583582	POLA1	P09884	1462 aa	Predicted RBP	28.48	■■■□□ 2.15
STARD3-223	ENST00000583582	CEP162	Q5TB80	1403 aa		28.47	■■■□□ 2.15
STARD3-223	ENST00000583582	RAPGEF2	Q9Y4G8	1499 aa		28.41	■■■□□ 2.14
STARD3-223	ENST00000583582	WDR97	A6NE52	1622 aa		28.39	■■■□□ 2.14
STARD3-223	ENST00000583582	UBTF	P17480	764 aa	Known RBP	28.38	■■■□□ 2.13
STARD3-223	ENST00000583582	MRC2	Q9UBG0	1479 aa		28.35	■■■□□ 2.13
STARD3-223	ENST00000583582	EHMT2	Q96KQ7	1210 aa		28.34	■■■□□ 2.13
STARD3-223	ENST00000583582	IGF1R	P08069	1367 aa		28.33	■■■□□ 2.13
STARD3-223	ENST00000583582	THOC2	Q8NI27	1593 aa	Known RBP	28.32	■■■□□ 2.12
STARD3-223	ENST00000583582	RAD54L2	Q9Y4B4	1467 aa		28.26	■■■□□ 2.11
STARD3-223	ENST00000583582	CUL7	Q14999	1698 aa		28.26	■■■□□ 2.11
STARD3-223	ENST00000583582	ABCA5	Q8WWZ7	1642 aa		28.24	■■■□□ 2.11
STARD3-223	ENST00000583582	WDR62	O43379	1518 aa		28.24	■■■□□ 2.11
STARD3-223	ENST00000583582	TARBP1	Q13395	1621 aa	Known RBP	28.21	■■■□□ 2.11
STARD3-223	ENST00000583582	CLIP1	P30622	1438 aa		28.21	■■■□□ 2.11
STARD3-223	ENST00000583582	CARMIL1	Q5VZK9	1371 aa		28.19	■■■□□ 2.1
STARD3-223	ENST00000583582	TRIM26	Q12899	539 aa	Predicted RBP	28.14	■■■□□ 2.1
STARD3-223	ENST00000583582	GAPVD1	Q14C86	1478 aa		28.09	■■■□□ 2.09
STARD3-223	ENST00000583582	IFT140	Q96RY7	1462 aa		28.08	■■■□□ 2.09
STARD3-223	ENST00000583582	VPS8	Q8N3P4	1428 aa		28.06	■■■□□ 2.08
STARD3-223	ENST00000583582	PCGF6	Q9BYE7	350 aa		27.97	■■■□□ 2.07
STARD3-223	ENST00000583582	TDRD9	Q8NDG6	1382 aa	Known RBP	27.95	■■■□□ 2.07
STARD3-223	ENST00000583582	PBRM1	Q86U86	1689 aa		27.95	■■■□□ 2.07
STARD3-223	ENST00000583582	DNAJC5	Q9H3Z4	198 aa		27.94	■■■□□ 2.06
STARD3-223	ENST00000583582	ARAP1	Q96P48	1450 aa		27.92	■■■□□ 2.06
STARD3-223	ENST00000583582	CTTNBP2	Q8WZ74	1663 aa		27.92	■■■□□ 2.06
STARD3-223	ENST00000583582	GRIN2B	Q13224	1484 aa		27.89	■■■□□ 2.05
STARD3-223	ENST00000583582	ARHGAP35	Q9NRY4	1499 aa		27.88	■■■□□ 2.05
STARD3-223	ENST00000583582	EFCAB5	A4FU69	1503 aa		27.86	■■■□□ 2.05
STARD3-223	ENST00000583582	FHAD1	B1AJZ9	1412 aa		27.85	■■■□□ 2.05
STARD3-223	ENST00000583582	ADAMTS12	P58397	1594 aa		27.84	■■■□□ 2.05
STARD3-223	ENST00000583582	AQR	O60306	1485 aa	Known RBP eCLIP	27.76	■■■□□ 2.03	9e-8	■■■■■ 30.5

Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms