RNA–Protein interactions for RNA: ENST00000583578.5

LINC00908-204, long intergenic non-protein coding RNA 908, humanhuman

TSL 3

Gene LINC00908, Length 449 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00908-204ENST00000583578 NISCHQ9Y2I1 1504 aa33.46■■■□□ 2.95
LINC00908-204ENST00000583578 CCDC180Q9P1Z9 1646 aa30.03■■■□□ 2.4
LINC00908-204ENST00000583578 ABCC9O60706 1549 aa29.96■■■□□ 2.39
LINC00908-204ENST00000583578 RB1CC1Q8TDY2 1594 aa28.55■■■□□ 2.16
LINC00908-204ENST00000583578 NACADO15069 1562 aa28.36■■■□□ 2.13
LINC00908-204ENST00000583578 DCAF8L2P0C7V8 631 aa28.18■■■□□ 2.1
LINC00908-204ENST00000583578 MYO15BQ96JP2 1530 aa27.99■■■□□ 2.07
LINC00908-204ENST00000583578 DNAJC5BQ9UF47 199 aa27.99■■■□□ 2.07
LINC00908-204ENST00000583578 UNC13AQ9UPW8 1703 aa27.89■■■□□ 2.05
LINC00908-204ENST00000583578 PABPN1Q86U42 306 aaKnown RBP eCLIP27.87■■■□□ 2.05
LINC00908-204ENST00000583578 ZCCHC6Q5VYS8 1495 aaKnown RBP27.76■■■□□ 2.04
LINC00908-204ENST00000583578 BICRAQ9NZM4 1560 aa27.7■■■□□ 2.03
LINC00908-204ENST00000583578 DCAF1Q9Y4B6 1507 aa27.65■■■□□ 2.02
LINC00908-204ENST00000583578 SCRIBQ14160 1630 aa27.38■■□□□ 1.97
LINC00908-204ENST00000583578 SHROOM4Q9ULL8 1493 aa27.37■■□□□ 1.97
LINC00908-204ENST00000583578 CC2D2AQ9P2K1 1620 aa27.06■■□□□ 1.92
LINC00908-204ENST00000583578 EIF4G1Q04637 1599 aaKnown RBP27.03■■□□□ 1.92
LINC00908-204ENST00000583578 CECR2Q9BXF3 1484 aa26.98■■□□□ 1.91
LINC00908-204ENST00000583578 NCAPD3P42695 1498 aa26.17■■□□□ 1.78
LINC00908-204ENST00000583578 SMARCA4P51532 1647 aa26.11■■□□□ 1.77
LINC00908-204ENST00000583578 ATAD2BQ9ULI0 1458 aa26.11■■□□□ 1.77
LINC00908-204ENST00000583578 SMARCA2P51531 1590 aa26.05■■□□□ 1.76
LINC00908-204ENST00000583578 HMGXB3Q12766 1538 aa26.01■■□□□ 1.75
LINC00908-204ENST00000583578 BAZ1AQ9NRL2 1556 aaPredicted RBP25.99■■□□□ 1.75
LINC00908-204ENST00000583578 ERCC6Q03468 1493 aa25.88■■□□□ 1.73
LINC00908-204ENST00000583578 BAZ1BQ9UIG0 1483 aaKnown RBP25.87■■□□□ 1.73
LINC00908-204ENST00000583578 PEG3Q9GZU2 1588 aa25.85■■□□□ 1.73
LINC00908-204ENST00000583578 CUX2O14529 1486 aa25.8■■□□□ 1.72
LINC00908-204ENST00000583578 MROH2BQ7Z745 1585 aa25.79■■□□□ 1.72
LINC00908-204ENST00000583578 NESP48681 1621 aa25.75■■□□□ 1.71
LINC00908-204ENST00000583578 DNAJC5Q9H3Z4 198 aa25.67■■□□□ 1.7
LINC00908-204ENST00000583578 LAMC3Q9Y6N6 1575 aa25.59■■□□□ 1.69
LINC00908-204ENST00000583578 THOC2Q8NI27 1593 aaKnown RBP25.49■■□□□ 1.67
LINC00908-204ENST00000583578 WIZO95785 1651 aa25.48■■□□□ 1.67
LINC00908-204ENST00000583578 PDS5BQ9NTI5 1447 aa25.43■■□□□ 1.66
LINC00908-204ENST00000583578 KIF21AQ7Z4S6 1674 aa25.42■■□□□ 1.66
LINC00908-204ENST00000583578 CADPSQ9ULU8 1353 aa25.37■■□□□ 1.65
LINC00908-204ENST00000583578 RSF1Q96T23 1441 aaPredicted RBP25.27■■□□□ 1.64
LINC00908-204ENST00000583578 MRC2Q9UBG0 1479 aa25.22■■□□□ 1.63
LINC00908-204ENST00000583578 TOP2AP11388 1531 aaKnown RBP25.19■■□□□ 1.62
LINC00908-204ENST00000583578 WDR62O43379 1518 aa25.16■■□□□ 1.62
LINC00908-204ENST00000583578 CEP164Q9UPV0 1460 aa25.14■■□□□ 1.61
LINC00908-204ENST00000583578 CFTRP13569 1480 aa25.11■■□□□ 1.61
LINC00908-204ENST00000583578 FANCD2Q9BXW9 1451 aa25.11■■□□□ 1.61
LINC00908-204ENST00000583578 URB2Q14146 1524 aaKnown RBP24.9■■□□□ 1.58
LINC00908-204ENST00000583578 PRDM2Q13029 1718 aa24.87■■□□□ 1.57
LINC00908-204ENST00000583578 CCDC88BA6NC98 1476 aa24.87■■□□□ 1.57
LINC00908-204ENST00000583578 TOPBP1Q92547 1522 aa24.64■■□□□ 1.53
LINC00908-204ENST00000583578 IFT140Q96RY7 1462 aa24.63■■□□□ 1.53
LINC00908-204ENST00000583578 OSCARQ8IYS5 282 aa24.59■■□□□ 1.53
LINC00908-204ENST00000583578 TRIM41Q8WV44 630 aa24.59■■□□□ 1.53
LINC00908-204ENST00000583578 ABCC8Q09428 1581 aa24.58■■□□□ 1.52
LINC00908-204ENST00000583578 ZNF608Q9ULD9 1512 aaPredicted RBP24.57■■□□□ 1.52
LINC00908-204ENST00000583578 DNMBPQ6XZF7 1577 aa24.56■■□□□ 1.52
LINC00908-204ENST00000583578 EIF4G3O43432 1585 aaKnown RBP24.46■■□□□ 1.51
LINC00908-204ENST00000583578 TARBP1Q13395 1621 aaKnown RBP24.41■■□□□ 1.5
LINC00908-204ENST00000583578 POLA1P09884 1462 aaPredicted RBP24.39■■□□□ 1.5
LINC00908-204ENST00000583578 AQRO60306 1485 aaKnown RBP eCLIP24.34■■□□□ 1.49
LINC00908-204ENST00000583578 RIMBP3CA6NJZ7 1639 aa24.31■■□□□ 1.48
LINC00908-204ENST00000583578 RIMBP3BA6NNM3 1639 aa24.31■■□□□ 1.48
LINC00908-204ENST00000583578 RIMBP3Q9UFD9 1639 aa24.31■■□□□ 1.48
LINC00908-204ENST00000583578 RAD54L2Q9Y4B4 1467 aa24.29■■□□□ 1.48
LINC00908-204ENST00000583578 CHD1O14646 1710 aa24.26■■□□□ 1.47
LINC00908-204ENST00000583578 SOGA1O94964 1423 aa24.26■■□□□ 1.47
LINC00908-204ENST00000583578 FGD5Q6ZNL6 1462 aa24.26■■□□□ 1.47
LINC00908-204ENST00000583578 ARHGEF11O15085 1522 aa24.24■■□□□ 1.47
LINC00908-204ENST00000583578 CUX1P39880 1505 aa24.24■■□□□ 1.47
LINC00908-204ENST00000583578 TDRD9Q8NDG6 1382 aaKnown RBP24.21■■□□□ 1.47
LINC00908-204ENST00000583578 WDR97A6NE52 1622 aa24.18■■□□□ 1.46
LINC00908-204ENST00000583578 SUPT5HO00267 1087 aaKnown RBP24.18■■□□□ 1.46
LINC00908-204ENST00000583578 FBLN2P98095 1184 aa24.17■■□□□ 1.46
LINC00908-204ENST00000583578 SNAPC4Q5SXM2 1469 aa24.13■■□□□ 1.45
LINC00908-204ENST00000583578 GRIN2BQ13224 1484 aa24.07■■□□□ 1.44
LINC00908-204ENST00000583578 MAGI1Q96QZ7 1491 aaPredicted RBP24.07■■□□□ 1.44
LINC00908-204ENST00000583578 CYB5RLQ6IPT4 315 aa24.01■■□□□ 1.43
LINC00908-204ENST00000583578 ARAP1Q96P48 1450 aa24■■□□□ 1.43
LINC00908-204ENST00000583578 CHMP7Q8WUX9 453 aaPredicted RBP24■■□□□ 1.43
LINC00908-204ENST00000583578 CLASP1Q7Z460 1538 aa23.99■■□□□ 1.43
LINC00908-204ENST00000583578 SYNJ1O43426 1573 aa23.99■■□□□ 1.43
LINC00908-204ENST00000583578 SYNJ2O15056 1496 aa23.98■■□□□ 1.43
LINC00908-204ENST00000583578 GAPVD1Q14C86 1478 aa23.98■■□□□ 1.43
LINC00908-204ENST00000583578 PBRM1Q86U86 1689 aa23.98■■□□□ 1.43
LINC00908-204ENST00000583578 ABCA10Q8WWZ4 1543 aa23.97■■□□□ 1.43
LINC00908-204ENST00000583578 ABCA5Q8WWZ7 1642 aa23.95■■□□□ 1.42
LINC00908-204ENST00000583578 WRNQ14191 1432 aaPredicted RBP eCLIP23.89■■□□□ 1.41
LINC00908-204ENST00000583578 TOP2BQ02880 1626 aa23.87■■□□□ 1.41
LINC00908-204ENST00000583578 BIVM-ERCC5R4GMW8 1640 aa23.87■■□□□ 1.41
LINC00908-204ENST00000583578 ADAMTS12P58397 1594 aa23.78■■□□□ 1.4
LINC00908-204ENST00000583578 GRIN2AQ12879 1464 aa23.76■■□□□ 1.39
LINC00908-204ENST00000583578 TRHP20396 242 aaPredicted RBP23.74■■□□□ 1.39
LINC00908-204ENST00000583578 FHAD1B1AJZ9 1412 aa23.68■■□□□ 1.38
LINC00908-204ENST00000583578 ERICH3Q5RHP9 1530 aa23.68■■□□□ 1.38
LINC00908-204ENST00000583578 CEP170Q5SW79 1584 aa23.67■■□□□ 1.38
LINC00908-204ENST00000583578 NUP160Q12769 1436 aa23.67■■□□□ 1.38
LINC00908-204ENST00000583578 ERCC6L2Q5T890 1561 aa23.61■■□□□ 1.37
LINC00908-204ENST00000583578 SHROOM2Q13796 1616 aa23.57■■□□□ 1.36
LINC00908-204ENST00000583578 RUSC2Q8N2Y8 1516 aa23.43■■□□□ 1.34
LINC00908-204ENST00000583578 PRG4Q92954 1404 aaPredicted RBP23.43■■□□□ 1.34
LINC00908-204ENST00000583578 KIF27Q86VH2 1401 aa23.4■■□□□ 1.34
LINC00908-204ENST00000583578 JPH4Q96JJ6 628 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms