RNA–Protein interactions for RNA: ENST00000583482.6

SPECC1-221, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 5

Gene SPECC1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-221ENST00000583482 NISCHQ9Y2I1 1504 aa43.12■■■■■ 4.49
SPECC1-221ENST00000583482 ABCC9O60706 1549 aa40.63■■■■■ 4.1
SPECC1-221ENST00000583482 DNAJC5BQ9UF47 199 aa39.39■■■■□ 3.9
SPECC1-221ENST00000583482 CCDC180Q9P1Z9 1646 aa39.36■■■■□ 3.89
SPECC1-221ENST00000583482 RB1CC1Q8TDY2 1594 aa38.06■■■■□ 3.68
SPECC1-221ENST00000583482 PABPN1Q86U42 306 aaKnown RBP eCLIP37.56■■■■□ 3.6
SPECC1-221ENST00000583482 NACADO15069 1562 aa37.48■■■■□ 3.59
SPECC1-221ENST00000583482 UNC13AQ9UPW8 1703 aa37.36■■■■□ 3.57
SPECC1-221ENST00000583482 BICRAQ9NZM4 1560 aa37.12■■■■□ 3.53
SPECC1-221ENST00000583482 DNAJC5Q9H3Z4 198 aa37.11■■■■□ 3.53
SPECC1-221ENST00000583482 DCAF8L2P0C7V8 631 aa36.78■■■■□ 3.48
SPECC1-221ENST00000583482 CECR2Q9BXF3 1484 aa36.75■■■■□ 3.47
SPECC1-221ENST00000583482 CC2D2AQ9P2K1 1620 aa36.69■■■■□ 3.46
SPECC1-221ENST00000583482 MYO15BQ96JP2 1530 aa36.54■■■■□ 3.44
SPECC1-221ENST00000583482 SHROOM4Q9ULL8 1493 aa36.39■■■■□ 3.42
SPECC1-221ENST00000583482 EIF4G1Q04637 1599 aaKnown RBP36.27■■■■□ 3.4
SPECC1-221ENST00000583482 SCRIBQ14160 1630 aa35.75■■■■□ 3.31
SPECC1-221ENST00000583482 CUX2O14529 1486 aa35.6■■■■□ 3.29
SPECC1-221ENST00000583482 DCAF1Q9Y4B6 1507 aa35.56■■■■□ 3.28
SPECC1-221ENST00000583482 ZCCHC6Q5VYS8 1495 aaKnown RBP35.48■■■■□ 3.27
SPECC1-221ENST00000583482 ERCC6Q03468 1493 aa35.12■■■■□ 3.21
SPECC1-221ENST00000583482 TRIM41Q8WV44 630 aa34.84■■■■□ 3.17
SPECC1-221ENST00000583482 NCAPD3P42695 1498 aa34.61■■■■□ 3.13
SPECC1-221ENST00000583482 NESP48681 1621 aa34.55■■■■□ 3.12
SPECC1-221ENST00000583482 THOC2Q8NI27 1593 aaKnown RBP34.55■■■■□ 3.12
SPECC1-221ENST00000583482 ATAD2BQ9ULI0 1458 aa34.33■■■■□ 3.09
SPECC1-221ENST00000583482 HMGXB3Q12766 1538 aa34.27■■■■□ 3.08
SPECC1-221ENST00000583482 SMARCA2P51531 1590 aa34.16■■■■□ 3.06
SPECC1-221ENST00000583482 KIF21AQ7Z4S6 1674 aa34.11■■■■□ 3.05
SPECC1-221ENST00000583482 LAMC3Q9Y6N6 1575 aa34.06■■■■□ 3.04
SPECC1-221ENST00000583482 SMARCA4P51532 1647 aa33.98■■■■□ 3.03
SPECC1-221ENST00000583482 BAZ1BQ9UIG0 1483 aaKnown RBP33.88■■■■□ 3.01
SPECC1-221ENST00000583482 BAZ1AQ9NRL2 1556 aaPredicted RBP33.87■■■■□ 3.01
SPECC1-221ENST00000583482 PDS5BQ9NTI5 1447 aa33.84■■■■□ 3.01
SPECC1-221ENST00000583482 WDR62O43379 1518 aa33.71■■■□□ 2.99
SPECC1-221ENST00000583482 MRC2Q9UBG0 1479 aa33.69■■■□□ 2.98
SPECC1-221ENST00000583482 PEG3Q9GZU2 1588 aa33.68■■■□□ 2.98
SPECC1-221ENST00000583482 OSCARQ8IYS5 282 aa33.62■■■□□ 2.97
SPECC1-221ENST00000583482 RIMBP3CA6NJZ7 1639 aa33.51■■■□□ 2.96
SPECC1-221ENST00000583482 RIMBP3BA6NNM3 1639 aa33.51■■■□□ 2.96
SPECC1-221ENST00000583482 RIMBP3Q9UFD9 1639 aa33.51■■■□□ 2.96
SPECC1-221ENST00000583482 CADPSQ9ULU8 1353 aa33.46■■■□□ 2.95
SPECC1-221ENST00000583482 CEP164Q9UPV0 1460 aa33.26■■■□□ 2.92
SPECC1-221ENST00000583482 MROH2BQ7Z745 1585 aa33.24■■■□□ 2.91
SPECC1-221ENST00000583482 ARHGEF11O15085 1522 aa33.23■■■□□ 2.91
SPECC1-221ENST00000583482 FANCD2Q9BXW9 1451 aa33.11■■■□□ 2.89
SPECC1-221ENST00000583482 AEBP2Q6ZN18 517 aaPredicted RBP33■■■□□ 2.87
SPECC1-221ENST00000583482 URB2Q14146 1524 aaKnown RBP32.98■■■□□ 2.87
SPECC1-221ENST00000583482 TRHP20396 242 aaPredicted RBP32.97■■■□□ 2.87
SPECC1-221ENST00000583482 CYB5RLQ6IPT4 315 aa32.94■■■□□ 2.86
SPECC1-221ENST00000583482 CFTRP13569 1480 aa32.83■■■□□ 2.85
SPECC1-221ENST00000583482 ARAP1Q96P48 1450 aa32.83■■■□□ 2.85
SPECC1-221ENST00000583482 ZNF608Q9ULD9 1512 aaPredicted RBP32.8■■■□□ 2.84
SPECC1-221ENST00000583482 WIZO95785 1651 aa32.78■■■□□ 2.84
SPECC1-221ENST00000583482 IFT140Q96RY7 1462 aa32.65■■■□□ 2.82
SPECC1-221ENST00000583482 CHD1O14646 1710 aa32.6■■■□□ 2.81
SPECC1-221ENST00000583482 EIF4G3O43432 1585 aaKnown RBP32.57■■■□□ 2.8
SPECC1-221ENST00000583482 RSF1Q96T23 1441 aaPredicted RBP32.53■■■□□ 2.8
SPECC1-221ENST00000583482 PRDM2Q13029 1718 aa32.47■■■□□ 2.79
SPECC1-221ENST00000583482 TOPBP1Q92547 1522 aa32.36■■■□□ 2.77
SPECC1-221ENST00000583482 AQRO60306 1485 aaKnown RBP eCLIP32.27■■■□□ 2.76
SPECC1-221ENST00000583482 TOP2AP11388 1531 aaKnown RBP32.25■■■□□ 2.75
SPECC1-221ENST00000583482 TARBP1Q13395 1621 aaKnown RBP32.22■■■□□ 2.75
SPECC1-221ENST00000583482 FBLN2P98095 1184 aa32.2■■■□□ 2.75
SPECC1-221ENST00000583482 CLASP1Q7Z460 1538 aa32.2■■■□□ 2.74
SPECC1-221ENST00000583482 DNMBPQ6XZF7 1577 aa32.12■■■□□ 2.73
SPECC1-221ENST00000583482 ABCC8Q09428 1581 aa32.11■■■□□ 2.73
SPECC1-221ENST00000583482 SYNJ1O43426 1573 aa31.97■■■□□ 2.71
SPECC1-221ENST00000583482 POLA1P09884 1462 aaPredicted RBP31.94■■■□□ 2.7
SPECC1-221ENST00000583482 SNAPC4Q5SXM2 1469 aa31.92■■■□□ 2.7
SPECC1-221ENST00000583482 ILDR1Q86SU0 546 aaPredicted RBP31.91■■■□□ 2.7
SPECC1-221ENST00000583482 CCDC88BA6NC98 1476 aa31.88■■■□□ 2.69
SPECC1-221ENST00000583482 GAPVD1Q14C86 1478 aa31.87■■■□□ 2.69
SPECC1-221ENST00000583482 RAD54L2Q9Y4B4 1467 aa31.84■■■□□ 2.69
SPECC1-221ENST00000583482 TDRD9Q8NDG6 1382 aaKnown RBP31.81■■■□□ 2.68
SPECC1-221ENST00000583482 MAGI1Q96QZ7 1491 aaPredicted RBP31.77■■■□□ 2.68
SPECC1-221ENST00000583482 WDR97A6NE52 1622 aa31.75■■■□□ 2.67
SPECC1-221ENST00000583482 CHMP7Q8WUX9 453 aaPredicted RBP31.75■■■□□ 2.67
SPECC1-221ENST00000583482 SOGA1O94964 1423 aa31.68■■■□□ 2.66
SPECC1-221ENST00000583482 SYNJ2O15056 1496 aa31.67■■■□□ 2.66
SPECC1-221ENST00000583482 KIF13AQ9H1H9 1805 aa31.66■■■□□ 2.66
SPECC1-221ENST00000583482 ERCC6L2Q5T890 1561 aa31.6■■■□□ 2.65
SPECC1-221ENST00000583482 GRIN2BQ13224 1484 aa31.6■■■□□ 2.65
SPECC1-221ENST00000583482 FGD5Q6ZNL6 1462 aa31.52■■■□□ 2.64
SPECC1-221ENST00000583482 KDM4FA0A1W2PPD8 638 aa31.48■■■□□ 2.63
SPECC1-221ENST00000583482 PBRM1Q86U86 1689 aa31.48■■■□□ 2.63
SPECC1-221ENST00000583482 CEP170Q5SW79 1584 aa31.37■■■□□ 2.61
SPECC1-221ENST00000583482 CUX1P39880 1505 aa31.32■■■□□ 2.6
SPECC1-221ENST00000583482 SHROOM2Q13796 1616 aa31.27■■■□□ 2.6
SPECC1-221ENST00000583482 ABCA5Q8WWZ7 1642 aa31.24■■■□□ 2.59
SPECC1-221ENST00000583482 GRIN2AQ12879 1464 aa31.22■■■□□ 2.59
SPECC1-221ENST00000583482 ABCC10Q5T3U5 1492 aa31.21■■■□□ 2.59
SPECC1-221ENST00000583482 NUP160Q12769 1436 aa31.2■■■□□ 2.59
SPECC1-221ENST00000583482 KDM6BO15054 1643 aa31.2■■■□□ 2.58
SPECC1-221ENST00000583482 DIP2BQ9P265 1576 aa31.14■■■□□ 2.58
SPECC1-221ENST00000583482 FAM69CQ0P6D2 419 aa31.14■■■□□ 2.58
SPECC1-221ENST00000583482 ADAMTS12P58397 1594 aa31.09■■■□□ 2.57
SPECC1-221ENST00000583482 ABCA10Q8WWZ4 1543 aa31.09■■■□□ 2.57
SPECC1-221ENST00000583482 MAPKBP1O60336 1514 aa31.08■■■□□ 2.57
SPECC1-221ENST00000583482 HECW2Q9P2P5 1572 aa30.98■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms