RNA–Protein interactions for RNA: ENST00000583463.5

SPECC1-220, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 4

Gene SPECC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-220ENST00000583463 NISCHQ9Y2I1 1504 aa37.98■■■■□ 3.67
SPECC1-220ENST00000583463 ABCC9O60706 1549 aa34.91■■■■□ 3.18
SPECC1-220ENST00000583463 CCDC180Q9P1Z9 1646 aa34.26■■■■□ 3.07
SPECC1-220ENST00000583463 DNAJC5BQ9UF47 199 aa33.31■■■□□ 2.92
SPECC1-220ENST00000583463 RB1CC1Q8TDY2 1594 aa32.83■■■□□ 2.85
SPECC1-220ENST00000583463 NACADO15069 1562 aa32.45■■■□□ 2.79
SPECC1-220ENST00000583463 PABPN1Q86U42 306 aaKnown RBP eCLIP32.45■■■□□ 2.79
SPECC1-220ENST00000583463 UNC13AQ9UPW8 1703 aa32.4■■■□□ 2.78
SPECC1-220ENST00000583463 DCAF8L2P0C7V8 631 aa32.35■■■□□ 2.77
SPECC1-220ENST00000583463 BICRAQ9NZM4 1560 aa32.08■■■□□ 2.73
SPECC1-220ENST00000583463 MYO15BQ96JP2 1530 aa31.74■■■□□ 2.67
SPECC1-220ENST00000583463 CC2D2AQ9P2K1 1620 aa31.49■■■□□ 2.63
SPECC1-220ENST00000583463 CECR2Q9BXF3 1484 aa31.4■■■□□ 2.62
SPECC1-220ENST00000583463 SCRIBQ14160 1630 aa31.36■■■□□ 2.61
SPECC1-220ENST00000583463 ZCCHC6Q5VYS8 1495 aaKnown RBP31.36■■■□□ 2.61
SPECC1-220ENST00000583463 EIF4G1Q04637 1599 aaKnown RBP31.25■■■□□ 2.59
SPECC1-220ENST00000583463 SHROOM4Q9ULL8 1493 aa31.21■■■□□ 2.59
SPECC1-220ENST00000583463 DCAF1Q9Y4B6 1507 aa31.19■■■□□ 2.58
SPECC1-220ENST00000583463 DNAJC5Q9H3Z4 198 aa30.73■■■□□ 2.51
SPECC1-220ENST00000583463 CUX2O14529 1486 aa30.08■■■□□ 2.41
SPECC1-220ENST00000583463 ERCC6Q03468 1493 aa30.04■■■□□ 2.4
SPECC1-220ENST00000583463 NCAPD3P42695 1498 aa29.98■■■□□ 2.39
SPECC1-220ENST00000583463 NESP48681 1621 aa29.91■■■□□ 2.38
SPECC1-220ENST00000583463 ATAD2BQ9ULI0 1458 aa29.9■■■□□ 2.38
SPECC1-220ENST00000583463 SMARCA4P51532 1647 aa29.78■■■□□ 2.36
SPECC1-220ENST00000583463 HMGXB3Q12766 1538 aa29.71■■■□□ 2.35
SPECC1-220ENST00000583463 SMARCA2P51531 1590 aa29.69■■■□□ 2.34
SPECC1-220ENST00000583463 THOC2Q8NI27 1593 aaKnown RBP29.64■■■□□ 2.33
SPECC1-220ENST00000583463 BAZ1BQ9UIG0 1483 aaKnown RBP29.55■■■□□ 2.32
SPECC1-220ENST00000583463 KIF21AQ7Z4S6 1674 aa29.52■■■□□ 2.32
SPECC1-220ENST00000583463 BAZ1AQ9NRL2 1556 aaPredicted RBP29.44■■■□□ 2.3
SPECC1-220ENST00000583463 PEG3Q9GZU2 1588 aa29.39■■■□□ 2.3
SPECC1-220ENST00000583463 LAMC3Q9Y6N6 1575 aa29.39■■■□□ 2.3
SPECC1-220ENST00000583463 MROH2BQ7Z745 1585 aa29.37■■■□□ 2.29
SPECC1-220ENST00000583463 TRIM41Q8WV44 630 aa29.29■■■□□ 2.28
SPECC1-220ENST00000583463 PDS5BQ9NTI5 1447 aa29.17■■■□□ 2.26
SPECC1-220ENST00000583463 WIZO95785 1651 aa29.05■■■□□ 2.24
SPECC1-220ENST00000583463 MRC2Q9UBG0 1479 aa29.05■■■□□ 2.24
SPECC1-220ENST00000583463 CADPSQ9ULU8 1353 aa29.05■■■□□ 2.24
SPECC1-220ENST00000583463 WDR62O43379 1518 aa29.02■■■□□ 2.24
SPECC1-220ENST00000583463 CEP164Q9UPV0 1460 aa28.82■■■□□ 2.2
SPECC1-220ENST00000583463 FANCD2Q9BXW9 1451 aa28.78■■■□□ 2.2
SPECC1-220ENST00000583463 URB2Q14146 1524 aaKnown RBP28.67■■■□□ 2.18
SPECC1-220ENST00000583463 OSCARQ8IYS5 282 aa28.64■■■□□ 2.18
SPECC1-220ENST00000583463 CFTRP13569 1480 aa28.64■■■□□ 2.17
SPECC1-220ENST00000583463 RIMBP3CA6NJZ7 1639 aa28.52■■■□□ 2.16
SPECC1-220ENST00000583463 RIMBP3BA6NNM3 1639 aa28.52■■■□□ 2.16
SPECC1-220ENST00000583463 RIMBP3Q9UFD9 1639 aa28.52■■■□□ 2.16
SPECC1-220ENST00000583463 RSF1Q96T23 1441 aaPredicted RBP28.5■■■□□ 2.15
SPECC1-220ENST00000583463 TOP2AP11388 1531 aaKnown RBP28.48■■■□□ 2.15
SPECC1-220ENST00000583463 ZNF608Q9ULD9 1512 aaPredicted RBP28.43■■■□□ 2.14
SPECC1-220ENST00000583463 PRDM2Q13029 1718 aa28.43■■■□□ 2.14
SPECC1-220ENST00000583463 ARHGEF11O15085 1522 aa28.3■■■□□ 2.12
SPECC1-220ENST00000583463 CCDC88BA6NC98 1476 aa28.22■■■□□ 2.11
SPECC1-220ENST00000583463 IFT140Q96RY7 1462 aa28.22■■■□□ 2.11
SPECC1-220ENST00000583463 TOPBP1Q92547 1522 aa28.22■■■□□ 2.11
SPECC1-220ENST00000583463 EIF4G3O43432 1585 aaKnown RBP28.2■■■□□ 2.11
SPECC1-220ENST00000583463 CHD1O14646 1710 aa28.18■■■□□ 2.1
SPECC1-220ENST00000583463 CYB5RLQ6IPT4 315 aa28.13■■■□□ 2.09
SPECC1-220ENST00000583463 AQRO60306 1485 aaKnown RBP eCLIP28.08■■■□□ 2.09
SPECC1-220ENST00000583463 TARBP1Q13395 1621 aaKnown RBP28.05■■■□□ 2.08
SPECC1-220ENST00000583463 ARAP1Q96P48 1450 aa28.03■■■□□ 2.08
SPECC1-220ENST00000583463 DNMBPQ6XZF7 1577 aa28.03■■■□□ 2.08
SPECC1-220ENST00000583463 TRHP20396 242 aaPredicted RBP27.94■■■□□ 2.06
SPECC1-220ENST00000583463 FBLN2P98095 1184 aa27.93■■■□□ 2.06
SPECC1-220ENST00000583463 ABCC8Q09428 1581 aa27.9■■■□□ 2.06
SPECC1-220ENST00000583463 RAD54L2Q9Y4B4 1467 aa27.89■■■□□ 2.06
SPECC1-220ENST00000583463 POLA1P09884 1462 aaPredicted RBP27.89■■■□□ 2.05
SPECC1-220ENST00000583463 TDRD9Q8NDG6 1382 aaKnown RBP27.8■■■□□ 2.04
SPECC1-220ENST00000583463 SUPT5HO00267 1087 aaKnown RBP27.74■■■□□ 2.03
SPECC1-220ENST00000583463 SNAPC4Q5SXM2 1469 aa27.74■■■□□ 2.03
SPECC1-220ENST00000583463 CLASP1Q7Z460 1538 aa27.72■■■□□ 2.03
SPECC1-220ENST00000583463 SOGA1O94964 1423 aa27.71■■■□□ 2.03
SPECC1-220ENST00000583463 FGD5Q6ZNL6 1462 aa27.67■■■□□ 2.02
SPECC1-220ENST00000583463 CUX1P39880 1505 aa27.61■■■□□ 2.01
SPECC1-220ENST00000583463 SYNJ1O43426 1573 aa27.56■■■□□ 2
SPECC1-220ENST00000583463 CHMP7Q8WUX9 453 aaPredicted RBP27.55■■■□□ 2
SPECC1-220ENST00000583463 WDR97A6NE52 1622 aa27.55■■■□□ 2
SPECC1-220ENST00000583463 PBRM1Q86U86 1689 aa27.52■■■□□ 2
SPECC1-220ENST00000583463 MAGI1Q96QZ7 1491 aaPredicted RBP27.51■■□□□ 1.99
SPECC1-220ENST00000583463 GRIN2BQ13224 1484 aa27.49■■□□□ 1.99
SPECC1-220ENST00000583463 SYNJ2O15056 1496 aa27.46■■□□□ 1.99
SPECC1-220ENST00000583463 ERCC6L2Q5T890 1561 aa27.43■■□□□ 1.98
SPECC1-220ENST00000583463 GAPVD1Q14C86 1478 aa27.42■■□□□ 1.98
SPECC1-220ENST00000583463 AEBP2Q6ZN18 517 aaPredicted RBP27.41■■□□□ 1.98
SPECC1-220ENST00000583463 ABCA5Q8WWZ7 1642 aa27.34■■□□□ 1.97
SPECC1-220ENST00000583463 ABCA10Q8WWZ4 1543 aa27.25■■□□□ 1.95
SPECC1-220ENST00000583463 CEP170Q5SW79 1584 aa27.22■■□□□ 1.95
SPECC1-220ENST00000583463 GRIN2AQ12879 1464 aa27.19■■□□□ 1.94
SPECC1-220ENST00000583463 ADAMTS12P58397 1594 aa27.16■■□□□ 1.94
SPECC1-220ENST00000583463 KIF13AQ9H1H9 1805 aa27.14■■□□□ 1.94
SPECC1-220ENST00000583463 SHROOM2Q13796 1616 aa27.09■■□□□ 1.93
SPECC1-220ENST00000583463 NUP160Q12769 1436 aa27.09■■□□□ 1.93
SPECC1-220ENST00000583463 BIVM-ERCC5R4GMW8 1640 aa26.99■■□□□ 1.91
SPECC1-220ENST00000583463 WRNQ14191 1432 aaPredicted RBP eCLIP26.98■■□□□ 1.91
SPECC1-220ENST00000583463 TOP2BQ02880 1626 aa26.94■■□□□ 1.9
SPECC1-220ENST00000583463 FHAD1B1AJZ9 1412 aa26.94■■□□□ 1.9
SPECC1-220ENST00000583463 PRG4Q92954 1404 aaPredicted RBP26.9■■□□□ 1.9
SPECC1-220ENST00000583463 ERICH3Q5RHP9 1530 aa26.85■■□□□ 1.89
SPECC1-220ENST00000583463 JPH4Q96JJ6 628 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms