RNA–Protein interactions for RNA: ENST00000583410.1

ARHGAP28-213, Transcript of Rho GTPase activating protein 28, humanhuman

TSL 5

Gene ARHGAP28, Length 462 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP28-213ENST00000583410 NISCHQ9Y2I1 1504 aa46.38■■■■■ 5.02
ARHGAP28-213ENST00000583410 ABCC9O60706 1549 aa42.08■■■■■ 4.33
ARHGAP28-213ENST00000583410 CCDC180Q9P1Z9 1646 aa41.74■■■■■ 4.27
ARHGAP28-213ENST00000583410 RB1CC1Q8TDY2 1594 aa39.85■■■■□ 3.97
ARHGAP28-213ENST00000583410 DNAJC5BQ9UF47 199 aa39.83■■■■□ 3.97
ARHGAP28-213ENST00000583410 NACADO15069 1562 aa39.5■■■■□ 3.91
ARHGAP28-213ENST00000583410 DCAF8L2P0C7V8 631 aa39.27■■■■□ 3.88
ARHGAP28-213ENST00000583410 PABPN1Q86U42 306 aaKnown RBP eCLIP39.14■■■■□ 3.86
ARHGAP28-213ENST00000583410 UNC13AQ9UPW8 1703 aa39.13■■■■□ 3.85
ARHGAP28-213ENST00000583410 MYO15BQ96JP2 1530 aa38.84■■■■□ 3.81
ARHGAP28-213ENST00000583410 BICRAQ9NZM4 1560 aa38.82■■■■□ 3.8
ARHGAP28-213ENST00000583410 ZCCHC6Q5VYS8 1495 aaKnown RBP38.37■■■■□ 3.73
ARHGAP28-213ENST00000583410 DCAF1Q9Y4B6 1507 aa38.24■■■■□ 3.71
ARHGAP28-213ENST00000583410 SHROOM4Q9ULL8 1493 aa38.07■■■■□ 3.68
ARHGAP28-213ENST00000583410 SCRIBQ14160 1630 aa38.06■■■■□ 3.68
ARHGAP28-213ENST00000583410 CC2D2AQ9P2K1 1620 aa38.01■■■■□ 3.67
ARHGAP28-213ENST00000583410 CECR2Q9BXF3 1484 aa37.9■■■■□ 3.66
ARHGAP28-213ENST00000583410 EIF4G1Q04637 1599 aaKnown RBP37.82■■■■□ 3.65
ARHGAP28-213ENST00000583410 DNAJC5Q9H3Z4 198 aa36.69■■■■□ 3.46
ARHGAP28-213ENST00000583410 NCAPD3P42695 1498 aa36.49■■■■□ 3.43
ARHGAP28-213ENST00000583410 ATAD2BQ9ULI0 1458 aa36.36■■■■□ 3.41
ARHGAP28-213ENST00000583410 CUX2O14529 1486 aa36.31■■■■□ 3.4
ARHGAP28-213ENST00000583410 ERCC6Q03468 1493 aa36.27■■■■□ 3.4
ARHGAP28-213ENST00000583410 SMARCA4P51532 1647 aa36.26■■■■□ 3.4
ARHGAP28-213ENST00000583410 SMARCA2P51531 1590 aa36.19■■■■□ 3.38
ARHGAP28-213ENST00000583410 HMGXB3Q12766 1538 aa36.18■■■■□ 3.38
ARHGAP28-213ENST00000583410 NESP48681 1621 aa36.1■■■■□ 3.37
ARHGAP28-213ENST00000583410 BAZ1AQ9NRL2 1556 aaPredicted RBP35.98■■■■□ 3.35
ARHGAP28-213ENST00000583410 BAZ1BQ9UIG0 1483 aaKnown RBP35.96■■■■□ 3.35
ARHGAP28-213ENST00000583410 PEG3Q9GZU2 1588 aa35.89■■■■□ 3.34
ARHGAP28-213ENST00000583410 MROH2BQ7Z745 1585 aa35.78■■■■□ 3.32
ARHGAP28-213ENST00000583410 THOC2Q8NI27 1593 aaKnown RBP35.77■■■■□ 3.32
ARHGAP28-213ENST00000583410 LAMC3Q9Y6N6 1575 aa35.71■■■■□ 3.31
ARHGAP28-213ENST00000583410 KIF21AQ7Z4S6 1674 aa35.65■■■■□ 3.3
ARHGAP28-213ENST00000583410 PDS5BQ9NTI5 1447 aa35.48■■■■□ 3.27
ARHGAP28-213ENST00000583410 WIZO95785 1651 aa35.37■■■■□ 3.25
ARHGAP28-213ENST00000583410 CADPSQ9ULU8 1353 aa35.36■■■■□ 3.25
ARHGAP28-213ENST00000583410 MRC2Q9UBG0 1479 aa35.22■■■■□ 3.23
ARHGAP28-213ENST00000583410 WDR62O43379 1518 aa35.17■■■■□ 3.22
ARHGAP28-213ENST00000583410 CEP164Q9UPV0 1460 aa35.01■■■■□ 3.19
ARHGAP28-213ENST00000583410 FANCD2Q9BXW9 1451 aa34.97■■■■□ 3.19
ARHGAP28-213ENST00000583410 TRIM41Q8WV44 630 aa34.96■■■■□ 3.19
ARHGAP28-213ENST00000583410 CFTRP13569 1480 aa34.9■■■■□ 3.18
ARHGAP28-213ENST00000583410 RSF1Q96T23 1441 aaPredicted RBP34.89■■■■□ 3.18
ARHGAP28-213ENST00000583410 TOP2AP11388 1531 aaKnown RBP34.81■■■■□ 3.16
ARHGAP28-213ENST00000583410 URB2Q14146 1524 aaKnown RBP34.76■■■■□ 3.15
ARHGAP28-213ENST00000583410 OSCARQ8IYS5 282 aa34.61■■■■□ 3.13
ARHGAP28-213ENST00000583410 PRDM2Q13029 1718 aa34.61■■■■□ 3.13
ARHGAP28-213ENST00000583410 CCDC88BA6NC98 1476 aa34.46■■■■□ 3.11
ARHGAP28-213ENST00000583410 ZNF608Q9ULD9 1512 aaPredicted RBP34.38■■■■□ 3.09
ARHGAP28-213ENST00000583410 IFT140Q96RY7 1462 aa34.32■■■■□ 3.08
ARHGAP28-213ENST00000583410 TOPBP1Q92547 1522 aa34.3■■■■□ 3.08
ARHGAP28-213ENST00000583410 RIMBP3CA6NJZ7 1639 aa34.28■■■■□ 3.08
ARHGAP28-213ENST00000583410 RIMBP3BA6NNM3 1639 aa34.28■■■■□ 3.08
ARHGAP28-213ENST00000583410 RIMBP3Q9UFD9 1639 aa34.28■■■■□ 3.08
ARHGAP28-213ENST00000583410 EIF4G3O43432 1585 aaKnown RBP34.15■■■■□ 3.06
ARHGAP28-213ENST00000583410 DNMBPQ6XZF7 1577 aa34.13■■■■□ 3.05
ARHGAP28-213ENST00000583410 ABCC8Q09428 1581 aa34.11■■■■□ 3.05
ARHGAP28-213ENST00000583410 ARHGEF11O15085 1522 aa34.1■■■■□ 3.05
ARHGAP28-213ENST00000583410 TARBP1Q13395 1621 aaKnown RBP34.05■■■■□ 3.04
ARHGAP28-213ENST00000583410 AQRO60306 1485 aaKnown RBP eCLIP34.02■■■■□ 3.04
ARHGAP28-213ENST00000583410 CHD1O14646 1710 aa34.01■■■■□ 3.04
ARHGAP28-213ENST00000583410 POLA1P09884 1462 aaPredicted RBP33.93■■■■□ 3.02
ARHGAP28-213ENST00000583410 CYB5RLQ6IPT4 315 aa33.86■■■■□ 3.01
ARHGAP28-213ENST00000583410 RAD54L2Q9Y4B4 1467 aa33.85■■■■□ 3.01
ARHGAP28-213ENST00000583410 FBLN2P98095 1184 aa33.8■■■■□ 3
ARHGAP28-213ENST00000583410 ARAP1Q96P48 1450 aa33.77■■■■□ 3
ARHGAP28-213ENST00000583410 SOGA1O94964 1423 aa33.75■■■□□ 2.99
ARHGAP28-213ENST00000583410 TDRD9Q8NDG6 1382 aaKnown RBP33.74■■■□□ 2.99
ARHGAP28-213ENST00000583410 FGD5Q6ZNL6 1462 aa33.68■■■□□ 2.98
ARHGAP28-213ENST00000583410 SNAPC4Q5SXM2 1469 aa33.63■■■□□ 2.97
ARHGAP28-213ENST00000583410 CUX1P39880 1505 aa33.63■■■□□ 2.97
ARHGAP28-213ENST00000583410 WDR97A6NE52 1622 aa33.57■■■□□ 2.97
ARHGAP28-213ENST00000583410 CLASP1Q7Z460 1538 aa33.56■■■□□ 2.96
ARHGAP28-213ENST00000583410 TRHP20396 242 aaPredicted RBP33.55■■■□□ 2.96
ARHGAP28-213ENST00000583410 MAGI1Q96QZ7 1491 aaPredicted RBP33.49■■■□□ 2.95
ARHGAP28-213ENST00000583410 CHMP7Q8WUX9 453 aaPredicted RBP33.48■■■□□ 2.95
ARHGAP28-213ENST00000583410 GRIN2BQ13224 1484 aa33.46■■■□□ 2.95
ARHGAP28-213ENST00000583410 SYNJ1O43426 1573 aa33.46■■■□□ 2.95
ARHGAP28-213ENST00000583410 PBRM1Q86U86 1689 aa33.4■■■□□ 2.94
ARHGAP28-213ENST00000583410 SYNJ2O15056 1496 aa33.4■■■□□ 2.94
ARHGAP28-213ENST00000583410 GAPVD1Q14C86 1478 aa33.32■■■□□ 2.92
ARHGAP28-213ENST00000583410 ABCA5Q8WWZ7 1642 aa33.27■■■□□ 2.92
ARHGAP28-213ENST00000583410 ABCA10Q8WWZ4 1543 aa33.25■■■□□ 2.91
ARHGAP28-213ENST00000583410 SUPT5HO00267 1087 aaKnown RBP33.13■■■□□ 2.89
ARHGAP28-213ENST00000583410 ERCC6L2Q5T890 1561 aa33.09■■■□□ 2.89
ARHGAP28-213ENST00000583410 GRIN2AQ12879 1464 aa33.05■■■□□ 2.88
ARHGAP28-213ENST00000583410 ADAMTS12P58397 1594 aa33.02■■■□□ 2.88
ARHGAP28-213ENST00000583410 WRNQ14191 1432 aaPredicted RBP eCLIP33.02■■■□□ 2.88
ARHGAP28-213ENST00000583410 CEP170Q5SW79 1584 aa33.01■■■□□ 2.88
ARHGAP28-213ENST00000583410 BIVM-ERCC5R4GMW8 1640 aa33■■■□□ 2.87
ARHGAP28-213ENST00000583410 TOP2BQ02880 1626 aa32.97■■■□□ 2.87
ARHGAP28-213ENST00000583410 NUP160Q12769 1436 aa32.96■■■□□ 2.87
ARHGAP28-213ENST00000583410 SHROOM2Q13796 1616 aa32.89■■■□□ 2.86
ARHGAP28-213ENST00000583410 FHAD1B1AJZ9 1412 aa32.86■■■□□ 2.85
ARHGAP28-213ENST00000583410 ERICH3Q5RHP9 1530 aa32.81■■■□□ 2.84
ARHGAP28-213ENST00000583410 AEBP2Q6ZN18 517 aaPredicted RBP32.75■■■□□ 2.83
ARHGAP28-213ENST00000583410 KIF13AQ9H1H9 1805 aa32.68■■■□□ 2.82
ARHGAP28-213ENST00000583410 PRG4Q92954 1404 aaPredicted RBP32.67■■■□□ 2.82
ARHGAP28-213ENST00000583410 JPH4Q96JJ6 628 aa32.62■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms