RNA–Protein interactions for RNA: ENST00000583361.1

PRKCA-204, Transcript of protein kinase C alpha, humanhuman

TSL 3

Gene PRKCA, Length 519 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-204ENST00000583361 NISCHQ9Y2I1 1504 aa19.33■□□□□ 0.68
PRKCA-204ENST00000583361 CCDC180Q9P1Z9 1646 aa17.32■□□□□ 0.36
PRKCA-204ENST00000583361 ABCC9O60706 1549 aa17.1■□□□□ 0.33
PRKCA-204ENST00000583361 RB1CC1Q8TDY2 1594 aa16.38■□□□□ 0.21
PRKCA-204ENST00000583361 DCAF8L2P0C7V8 631 aa16.35■□□□□ 0.21
PRKCA-204ENST00000583361 NACADO15069 1562 aa16.27■□□□□ 0.2
PRKCA-204ENST00000583361 UNC13AQ9UPW8 1703 aa16.09■□□□□ 0.17
PRKCA-204ENST00000583361 ZCCHC6Q5VYS8 1495 aaKnown RBP16.06■□□□□ 0.16
PRKCA-204ENST00000583361 MYO15BQ96JP2 1530 aa16.04■□□□□ 0.16
PRKCA-204ENST00000583361 DCAF1Q9Y4B6 1507 aa15.94■□□□□ 0.14
PRKCA-204ENST00000583361 PABPN1Q86U42 306 aaKnown RBP eCLIP15.94■□□□□ 0.14
PRKCA-204ENST00000583361 SCRIBQ14160 1630 aa15.83■□□□□ 0.13
PRKCA-204ENST00000583361 BICRAQ9NZM4 1560 aa15.83■□□□□ 0.12
PRKCA-204ENST00000583361 DNAJC5BQ9UF47 199 aa15.73■□□□□ 0.11
PRKCA-204ENST00000583361 SHROOM4Q9ULL8 1493 aa15.6■□□□□ 0.09
PRKCA-204ENST00000583361 EIF4G1Q04637 1599 aaKnown RBP15.46■□□□□ 0.07
PRKCA-204ENST00000583361 CC2D2AQ9P2K1 1620 aa15.46■□□□□ 0.06
PRKCA-204ENST00000583361 CECR2Q9BXF3 1484 aa15.35■□□□□ 0.05
PRKCA-204ENST00000583361 SMARCA4P51532 1647 aa15.08■□□□□ 0
PRKCA-204ENST00000583361 BAZ1AQ9NRL2 1556 aaPredicted RBP15.03■□□□□ -0
PRKCA-204ENST00000583361 SMARCA2P51531 1590 aa14.99□□□□□ -0.01
PRKCA-204ENST00000583361 ATAD2BQ9ULI0 1458 aa14.98□□□□□ -0.01
PRKCA-204ENST00000583361 NCAPD3P42695 1498 aa14.96□□□□□ -0.01
PRKCA-204ENST00000583361 HMGXB3Q12766 1538 aa14.92□□□□□ -0.02
PRKCA-204ENST00000583361 MROH2BQ7Z745 1585 aa14.91□□□□□ -0.02
PRKCA-204ENST00000583361 BAZ1BQ9UIG0 1483 aaKnown RBP14.91□□□□□ -0.02
PRKCA-204ENST00000583361 PEG3Q9GZU2 1588 aa14.86□□□□□ -0.03
PRKCA-204ENST00000583361 WIZO95785 1651 aa14.82□□□□□ -0.04
PRKCA-204ENST00000583361 ERCC6Q03468 1493 aa14.79□□□□□ -0.04
PRKCA-204ENST00000583361 NESP48681 1621 aa14.74□□□□□ -0.05
PRKCA-204ENST00000583361 LAMC3Q9Y6N6 1575 aa14.68□□□□□ -0.06
PRKCA-204ENST00000583361 RSF1Q96T23 1441 aaPredicted RBP14.65□□□□□ -0.06
PRKCA-204ENST00000583361 KIF21AQ7Z4S6 1674 aa14.64□□□□□ -0.07
PRKCA-204ENST00000583361 CUX2O14529 1486 aa14.6□□□□□ -0.07
PRKCA-204ENST00000583361 TOP2AP11388 1531 aaKnown RBP14.59□□□□□ -0.07
PRKCA-204ENST00000583361 PDS5BQ9NTI5 1447 aa14.56□□□□□ -0.08
PRKCA-204ENST00000583361 THOC2Q8NI27 1593 aaKnown RBP14.55□□□□□ -0.08
PRKCA-204ENST00000583361 CADPSQ9ULU8 1353 aa14.54□□□□□ -0.08
PRKCA-204ENST00000583361 PRDM2Q13029 1718 aa14.47□□□□□ -0.09
PRKCA-204ENST00000583361 CEP164Q9UPV0 1460 aa14.44□□□□□ -0.1
PRKCA-204ENST00000583361 FANCD2Q9BXW9 1451 aa14.43□□□□□ -0.1
PRKCA-204ENST00000583361 MRC2Q9UBG0 1479 aa14.43□□□□□ -0.1
PRKCA-204ENST00000583361 CFTRP13569 1480 aa14.42□□□□□ -0.1
PRKCA-204ENST00000583361 CCDC88BA6NC98 1476 aa14.4□□□□□ -0.1
PRKCA-204ENST00000583361 WDR62O43379 1518 aa14.36□□□□□ -0.11
PRKCA-204ENST00000583361 DNAJC5Q9H3Z4 198 aa14.3□□□□□ -0.12
PRKCA-204ENST00000583361 SUPT5HO00267 1087 aaKnown RBP14.29□□□□□ -0.12
PRKCA-204ENST00000583361 URB2Q14146 1524 aaKnown RBP14.27□□□□□ -0.12
PRKCA-204ENST00000583361 TOPBP1Q92547 1522 aa14.17□□□□□ -0.14
PRKCA-204ENST00000583361 DNMBPQ6XZF7 1577 aa14.16□□□□□ -0.14
PRKCA-204ENST00000583361 ABCC8Q09428 1581 aa14.15□□□□□ -0.14
PRKCA-204ENST00000583361 IFT140Q96RY7 1462 aa14.11□□□□□ -0.15
PRKCA-204ENST00000583361 ZNF608Q9ULD9 1512 aaPredicted RBP14.06□□□□□ -0.16
PRKCA-204ENST00000583361 EIF4G3O43432 1585 aaKnown RBP14.05□□□□□ -0.16
PRKCA-204ENST00000583361 POLA1P09884 1462 aaPredicted RBP14.03□□□□□ -0.16
PRKCA-204ENST00000583361 TARBP1Q13395 1621 aaKnown RBP14.03□□□□□ -0.16
PRKCA-204ENST00000583361 CUX1P39880 1505 aa14□□□□□ -0.17
PRKCA-204ENST00000583361 FGD5Q6ZNL6 1462 aa14□□□□□ -0.17
PRKCA-204ENST00000583361 RAD54L2Q9Y4B4 1467 aa13.99□□□□□ -0.17
PRKCA-204ENST00000583361 OSCARQ8IYS5 282 aa13.98□□□□□ -0.17
PRKCA-204ENST00000583361 CHD1O14646 1710 aa13.98□□□□□ -0.17
PRKCA-204ENST00000583361 SOGA1O94964 1423 aa13.98□□□□□ -0.17
PRKCA-204ENST00000583361 AQRO60306 1485 aaKnown RBP eCLIP13.97□□□□□ -0.17
PRKCA-204ENST00000583361 TDRD9Q8NDG6 1382 aaKnown RBP13.93□□□□□ -0.18
PRKCA-204ENST00000583361 FBLN2P98095 1184 aa13.92□□□□□ -0.18
PRKCA-204ENST00000583361 WDR97A6NE52 1622 aa13.92□□□□□ -0.18
PRKCA-204ENST00000583361 PBRM1Q86U86 1689 aa13.91□□□□□ -0.18
PRKCA-204ENST00000583361 TRIM41Q8WV44 630 aa13.9□□□□□ -0.18
PRKCA-204ENST00000583361 BIVM-ERCC5R4GMW8 1640 aa13.88□□□□□ -0.19
PRKCA-204ENST00000583361 WRNQ14191 1432 aaPredicted RBP eCLIP13.87□□□□□ -0.19
PRKCA-204ENST00000583361 TOP2BQ02880 1626 aa13.86□□□□□ -0.19
PRKCA-204ENST00000583361 SYNJ1O43426 1573 aa13.86□□□□□ -0.19
PRKCA-204ENST00000583361 SNAPC4Q5SXM2 1469 aa13.86□□□□□ -0.19
PRKCA-204ENST00000583361 RIMBP3CA6NJZ7 1639 aa13.83□□□□□ -0.2
PRKCA-204ENST00000583361 RIMBP3BA6NNM3 1639 aa13.83□□□□□ -0.2
PRKCA-204ENST00000583361 RIMBP3Q9UFD9 1639 aa13.83□□□□□ -0.2
PRKCA-204ENST00000583361 GRIN2BQ13224 1484 aa13.83□□□□□ -0.2
PRKCA-204ENST00000583361 GAPVD1Q14C86 1478 aa13.82□□□□□ -0.2
PRKCA-204ENST00000583361 ABCA10Q8WWZ4 1543 aa13.81□□□□□ -0.2
PRKCA-204ENST00000583361 CHMP7Q8WUX9 453 aaPredicted RBP13.81□□□□□ -0.2
PRKCA-204ENST00000583361 ABCA5Q8WWZ7 1642 aa13.81□□□□□ -0.2
PRKCA-204ENST00000583361 MAGI1Q96QZ7 1491 aaPredicted RBP13.8□□□□□ -0.2
PRKCA-204ENST00000583361 ARHGEF11O15085 1522 aa13.77□□□□□ -0.21
PRKCA-204ENST00000583361 SYNJ2O15056 1496 aa13.76□□□□□ -0.21
PRKCA-204ENST00000583361 ADAMTS12P58397 1594 aa13.71□□□□□ -0.22
PRKCA-204ENST00000583361 CLASP1Q7Z460 1538 aa13.69□□□□□ -0.22
PRKCA-204ENST00000583361 CYB5RLQ6IPT4 315 aa13.67□□□□□ -0.22
PRKCA-204ENST00000583361 ERICH3Q5RHP9 1530 aa13.67□□□□□ -0.22
PRKCA-204ENST00000583361 GRIN2AQ12879 1464 aa13.67□□□□□ -0.22
PRKCA-204ENST00000583361 FHAD1B1AJZ9 1412 aa13.64□□□□□ -0.23
PRKCA-204ENST00000583361 ARAP1Q96P48 1450 aa13.63□□□□□ -0.23
PRKCA-204ENST00000583361 CEP170Q5SW79 1584 aa13.62□□□□□ -0.23
PRKCA-204ENST00000583361 KIF27Q86VH2 1401 aa13.59□□□□□ -0.23
PRKCA-204ENST00000583361 CUL7Q14999 1698 aa13.58□□□□□ -0.24
PRKCA-204ENST00000583361 NUP160Q12769 1436 aa13.56□□□□□ -0.24
PRKCA-204ENST00000583361 TRHP20396 242 aaPredicted RBP13.52□□□□□ -0.25
PRKCA-204ENST00000583361 ERCC6L2Q5T890 1561 aa13.52□□□□□ -0.25
PRKCA-204ENST00000583361 SHROOM2Q13796 1616 aa13.52□□□□□ -0.25
PRKCA-204ENST00000583361 RUSC2Q8N2Y8 1516 aa13.5□□□□□ -0.25
PRKCA-204ENST00000583361 IGF1RP08069 1367 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms