RNA–Protein interactions for RNA: ENST00000583349.1

AC004477.2-201, humanhuman

TSL 3 BASIC

Gene AC004477.2, Length 192 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004477.2-201ENST00000583349 NISCHQ9Y2I1 1504 aa20.88■□□□□ 0.93
AC004477.2-201ENST00000583349 ABCC9O60706 1549 aa18.81■□□□□ 0.6
AC004477.2-201ENST00000583349 CCDC180Q9P1Z9 1646 aa18.78■□□□□ 0.6
AC004477.2-201ENST00000583349 RB1CC1Q8TDY2 1594 aa17.87■□□□□ 0.45
AC004477.2-201ENST00000583349 DNAJC5BQ9UF47 199 aa17.82■□□□□ 0.44
AC004477.2-201ENST00000583349 NACADO15069 1562 aa17.76■□□□□ 0.43
AC004477.2-201ENST00000583349 MYO15BQ96JP2 1530 aa17.56■□□□□ 0.4
AC004477.2-201ENST00000583349 UNC13AQ9UPW8 1703 aa17.52■□□□□ 0.4
AC004477.2-201ENST00000583349 PABPN1Q86U42 306 aaKnown RBP eCLIP17.47■□□□□ 0.39
AC004477.2-201ENST00000583349 BICRAQ9NZM4 1560 aa17.46■□□□□ 0.39
AC004477.2-201ENST00000583349 DCAF8L2P0C7V8 631 aa17.45■□□□□ 0.38
AC004477.2-201ENST00000583349 ZCCHC6Q5VYS8 1495 aaKnown RBP17.31■□□□□ 0.36
AC004477.2-201ENST00000583349 DCAF1Q9Y4B6 1507 aa17.28■□□□□ 0.36
AC004477.2-201ENST00000583349 SHROOM4Q9ULL8 1493 aa17.19■□□□□ 0.34
AC004477.2-201ENST00000583349 SCRIBQ14160 1630 aa17.04■□□□□ 0.32
AC004477.2-201ENST00000583349 CC2D2AQ9P2K1 1620 aa17.03■□□□□ 0.32
AC004477.2-201ENST00000583349 EIF4G1Q04637 1599 aaKnown RBP16.98■□□□□ 0.31
AC004477.2-201ENST00000583349 CECR2Q9BXF3 1484 aa16.97■□□□□ 0.31
AC004477.2-201ENST00000583349 NCAPD3P42695 1498 aa16.43■□□□□ 0.22
AC004477.2-201ENST00000583349 DNAJC5Q9H3Z4 198 aa16.39■□□□□ 0.21
AC004477.2-201ENST00000583349 ATAD2BQ9ULI0 1458 aa16.35■□□□□ 0.21
AC004477.2-201ENST00000583349 SMARCA4P51532 1647 aa16.3■□□□□ 0.2
AC004477.2-201ENST00000583349 HMGXB3Q12766 1538 aa16.29■□□□□ 0.2
AC004477.2-201ENST00000583349 CUX2O14529 1486 aa16.29■□□□□ 0.2
AC004477.2-201ENST00000583349 SMARCA2P51531 1590 aa16.26■□□□□ 0.19
AC004477.2-201ENST00000583349 PEG3Q9GZU2 1588 aa16.2■□□□□ 0.18
AC004477.2-201ENST00000583349 ERCC6Q03468 1493 aa16.19■□□□□ 0.18
AC004477.2-201ENST00000583349 BAZ1AQ9NRL2 1556 aaPredicted RBP16.18■□□□□ 0.18
AC004477.2-201ENST00000583349 NESP48681 1621 aa16.17■□□□□ 0.18
AC004477.2-201ENST00000583349 BAZ1BQ9UIG0 1483 aaKnown RBP16.13■□□□□ 0.17
AC004477.2-201ENST00000583349 MROH2BQ7Z745 1585 aa16.09■□□□□ 0.17
AC004477.2-201ENST00000583349 THOC2Q8NI27 1593 aaKnown RBP16.06■□□□□ 0.16
AC004477.2-201ENST00000583349 LAMC3Q9Y6N6 1575 aa16.04■□□□□ 0.16
AC004477.2-201ENST00000583349 KIF21AQ7Z4S6 1674 aa15.94■□□□□ 0.14
AC004477.2-201ENST00000583349 PDS5BQ9NTI5 1447 aa15.91■□□□□ 0.14
AC004477.2-201ENST00000583349 CADPSQ9ULU8 1353 aa15.88■□□□□ 0.13
AC004477.2-201ENST00000583349 WIZO95785 1651 aa15.86■□□□□ 0.13
AC004477.2-201ENST00000583349 WDR62O43379 1518 aa15.81■□□□□ 0.12
AC004477.2-201ENST00000583349 MRC2Q9UBG0 1479 aa15.8■□□□□ 0.12
AC004477.2-201ENST00000583349 CFTRP13569 1480 aa15.72■□□□□ 0.11
AC004477.2-201ENST00000583349 RSF1Q96T23 1441 aaPredicted RBP15.72■□□□□ 0.11
AC004477.2-201ENST00000583349 CEP164Q9UPV0 1460 aa15.7■□□□□ 0.1
AC004477.2-201ENST00000583349 FANCD2Q9BXW9 1451 aa15.69■□□□□ 0.1
AC004477.2-201ENST00000583349 TOP2AP11388 1531 aaKnown RBP15.67■□□□□ 0.1
AC004477.2-201ENST00000583349 URB2Q14146 1524 aaKnown RBP15.61■□□□□ 0.09
AC004477.2-201ENST00000583349 PRDM2Q13029 1718 aa15.51■□□□□ 0.07
AC004477.2-201ENST00000583349 TRIM41Q8WV44 630 aa15.49■□□□□ 0.07
AC004477.2-201ENST00000583349 CCDC88BA6NC98 1476 aa15.48■□□□□ 0.07
AC004477.2-201ENST00000583349 OSCARQ8IYS5 282 aa15.46■□□□□ 0.07
AC004477.2-201ENST00000583349 ZNF608Q9ULD9 1512 aaPredicted RBP15.43■□□□□ 0.06
AC004477.2-201ENST00000583349 IFT140Q96RY7 1462 aa15.41■□□□□ 0.06
AC004477.2-201ENST00000583349 TOPBP1Q92547 1522 aa15.41■□□□□ 0.06
AC004477.2-201ENST00000583349 DNMBPQ6XZF7 1577 aa15.33■□□□□ 0.05
AC004477.2-201ENST00000583349 RIMBP3CA6NJZ7 1639 aa15.33■□□□□ 0.04
AC004477.2-201ENST00000583349 RIMBP3BA6NNM3 1639 aa15.33■□□□□ 0.04
AC004477.2-201ENST00000583349 RIMBP3Q9UFD9 1639 aa15.33■□□□□ 0.04
AC004477.2-201ENST00000583349 ABCC8Q09428 1581 aa15.32■□□□□ 0.04
AC004477.2-201ENST00000583349 EIF4G3O43432 1585 aaKnown RBP15.32■□□□□ 0.04
AC004477.2-201ENST00000583349 TARBP1Q13395 1621 aaKnown RBP15.31■□□□□ 0.04
AC004477.2-201ENST00000583349 ARHGEF11O15085 1522 aa15.28■□□□□ 0.04
AC004477.2-201ENST00000583349 POLA1P09884 1462 aaPredicted RBP15.25■□□□□ 0.03
AC004477.2-201ENST00000583349 AQRO60306 1485 aaKnown RBP eCLIP15.24■□□□□ 0.03
AC004477.2-201ENST00000583349 CHD1O14646 1710 aa15.2■□□□□ 0.02
AC004477.2-201ENST00000583349 RAD54L2Q9Y4B4 1467 aa15.17■□□□□ 0.02
AC004477.2-201ENST00000583349 ARAP1Q96P48 1450 aa15.14■□□□□ 0.01
AC004477.2-201ENST00000583349 CUX1P39880 1505 aa15.12■□□□□ 0.01
AC004477.2-201ENST00000583349 SOGA1O94964 1423 aa15.12■□□□□ 0.01
AC004477.2-201ENST00000583349 WDR97A6NE52 1622 aa15.12■□□□□ 0.01
AC004477.2-201ENST00000583349 FGD5Q6ZNL6 1462 aa15.12■□□□□ 0.01
AC004477.2-201ENST00000583349 TDRD9Q8NDG6 1382 aaKnown RBP15.11■□□□□ 0.01
AC004477.2-201ENST00000583349 CLASP1Q7Z460 1538 aa15.09■□□□□ 0.01
AC004477.2-201ENST00000583349 SNAPC4Q5SXM2 1469 aa15.08■□□□□ 0.01
AC004477.2-201ENST00000583349 CYB5RLQ6IPT4 315 aa15.08■□□□□ 0
AC004477.2-201ENST00000583349 MAGI1Q96QZ7 1491 aaPredicted RBP15.05■□□□□ -0
AC004477.2-201ENST00000583349 FBLN2P98095 1184 aa15.03■□□□□ -0
AC004477.2-201ENST00000583349 GRIN2BQ13224 1484 aa15.02■□□□□ -0
AC004477.2-201ENST00000583349 SYNJ2O15056 1496 aa15□□□□□ -0.01
AC004477.2-201ENST00000583349 SYNJ1O43426 1573 aa14.98□□□□□ -0.01
AC004477.2-201ENST00000583349 ABCA10Q8WWZ4 1543 aa14.97□□□□□ -0.01
AC004477.2-201ENST00000583349 ABCA5Q8WWZ7 1642 aa14.97□□□□□ -0.01
AC004477.2-201ENST00000583349 GAPVD1Q14C86 1478 aa14.95□□□□□ -0.02
AC004477.2-201ENST00000583349 PBRM1Q86U86 1689 aa14.95□□□□□ -0.02
AC004477.2-201ENST00000583349 CHMP7Q8WUX9 453 aaPredicted RBP14.94□□□□□ -0.02
AC004477.2-201ENST00000583349 TRHP20396 242 aaPredicted RBP14.87□□□□□ -0.03
AC004477.2-201ENST00000583349 GRIN2AQ12879 1464 aa14.85□□□□□ -0.03
AC004477.2-201ENST00000583349 ADAMTS12P58397 1594 aa14.85□□□□□ -0.03
AC004477.2-201ENST00000583349 BIVM-ERCC5R4GMW8 1640 aa14.84□□□□□ -0.03
AC004477.2-201ENST00000583349 NUP160Q12769 1436 aa14.84□□□□□ -0.03
AC004477.2-201ENST00000583349 ERCC6L2Q5T890 1561 aa14.84□□□□□ -0.03
AC004477.2-201ENST00000583349 TOP2BQ02880 1626 aa14.84□□□□□ -0.03
AC004477.2-201ENST00000583349 WRNQ14191 1432 aaPredicted RBP eCLIP14.83□□□□□ -0.04
AC004477.2-201ENST00000583349 CEP170Q5SW79 1584 aa14.82□□□□□ -0.04
AC004477.2-201ENST00000583349 SHROOM2Q13796 1616 aa14.8□□□□□ -0.04
AC004477.2-201ENST00000583349 SUPT5HO00267 1087 aaKnown RBP14.78□□□□□ -0.04
AC004477.2-201ENST00000583349 ERICH3Q5RHP9 1530 aa14.76□□□□□ -0.05
AC004477.2-201ENST00000583349 FHAD1B1AJZ9 1412 aa14.76□□□□□ -0.05
AC004477.2-201ENST00000583349 RUSC2Q8N2Y8 1516 aa14.65□□□□□ -0.06
AC004477.2-201ENST00000583349 PRG4Q92954 1404 aaPredicted RBP14.63□□□□□ -0.07
AC004477.2-201ENST00000583349 KIF13AQ9H1H9 1805 aa14.62□□□□□ -0.07
AC004477.2-201ENST00000583349 JPH4Q96JJ6 628 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms