RNA–Protein interactions for RNA: ENST00000583296.1

TMEM94-228, Transcript of transmembrane protein 94, humanhuman

TSL 2

Gene TMEM94, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM94-228ENST00000583296 NISCHQ9Y2I1 1504 aa36.01■■■■□ 3.36
TMEM94-228ENST00000583296 CCDC180Q9P1Z9 1646 aa32.27■■■□□ 2.76
TMEM94-228ENST00000583296 ABCC9O60706 1549 aa31.95■■■□□ 2.71
TMEM94-228ENST00000583296 RB1CC1Q8TDY2 1594 aa30.54■■■□□ 2.48
TMEM94-228ENST00000583296 NACADO15069 1562 aa30.37■■■□□ 2.45
TMEM94-228ENST00000583296 DCAF8L2P0C7V8 631 aa30.19■■■□□ 2.42
TMEM94-228ENST00000583296 MYO15BQ96JP2 1530 aa30.01■■■□□ 2.4
TMEM94-228ENST00000583296 ZCCHC6Q5VYS8 1495 aaKnown RBP29.95■■■□□ 2.39
TMEM94-228ENST00000583296 UNC13AQ9UPW8 1703 aa29.95■■■□□ 2.38
TMEM94-228ENST00000583296 DCAF1Q9Y4B6 1507 aa29.76■■■□□ 2.35
TMEM94-228ENST00000583296 PABPN1Q86U42 306 aaKnown RBP eCLIP29.72■■■□□ 2.35
TMEM94-228ENST00000583296 BICRAQ9NZM4 1560 aa29.64■■■□□ 2.34
TMEM94-228ENST00000583296 DNAJC5BQ9UF47 199 aa29.6■■■□□ 2.33
TMEM94-228ENST00000583296 SCRIBQ14160 1630 aa29.45■■■□□ 2.31
TMEM94-228ENST00000583296 SHROOM4Q9ULL8 1493 aa29.26■■■□□ 2.27
TMEM94-228ENST00000583296 EIF4G1Q04637 1599 aaKnown RBP28.91■■■□□ 2.22
TMEM94-228ENST00000583296 CC2D2AQ9P2K1 1620 aa28.9■■■□□ 2.22
TMEM94-228ENST00000583296 CECR2Q9BXF3 1484 aa28.73■■■□□ 2.19
TMEM94-228ENST00000583296 SMARCA4P51532 1647 aa28.09■■■□□ 2.09
TMEM94-228ENST00000583296 NCAPD3P42695 1498 aa27.99■■■□□ 2.07
TMEM94-228ENST00000583296 ATAD2BQ9ULI0 1458 aa27.98■■■□□ 2.07
TMEM94-228ENST00000583296 BAZ1AQ9NRL2 1556 aaPredicted RBP27.96■■■□□ 2.07
TMEM94-228ENST00000583296 SMARCA2P51531 1590 aa27.94■■■□□ 2.06
TMEM94-228ENST00000583296 HMGXB3Q12766 1538 aa27.89■■■□□ 2.06
TMEM94-228ENST00000583296 MROH2BQ7Z745 1585 aa27.77■■■□□ 2.04
TMEM94-228ENST00000583296 PEG3Q9GZU2 1588 aa27.77■■■□□ 2.04
TMEM94-228ENST00000583296 BAZ1BQ9UIG0 1483 aaKnown RBP27.76■■■□□ 2.04
TMEM94-228ENST00000583296 ERCC6Q03468 1493 aa27.58■■■□□ 2.01
TMEM94-228ENST00000583296 NESP48681 1621 aa27.53■■■□□ 2
TMEM94-228ENST00000583296 WIZO95785 1651 aa27.49■■□□□ 1.99
TMEM94-228ENST00000583296 CUX2O14529 1486 aa27.4■■□□□ 1.98
TMEM94-228ENST00000583296 LAMC3Q9Y6N6 1575 aa27.39■■□□□ 1.97
TMEM94-228ENST00000583296 KIF21AQ7Z4S6 1674 aa27.27■■□□□ 1.96
TMEM94-228ENST00000583296 THOC2Q8NI27 1593 aaKnown RBP27.26■■□□□ 1.95
TMEM94-228ENST00000583296 RSF1Q96T23 1441 aaPredicted RBP27.25■■□□□ 1.95
TMEM94-228ENST00000583296 TOP2AP11388 1531 aaKnown RBP27.16■■□□□ 1.94
TMEM94-228ENST00000583296 PDS5BQ9NTI5 1447 aa27.16■■□□□ 1.94
TMEM94-228ENST00000583296 CADPSQ9ULU8 1353 aa27.14■■□□□ 1.94
TMEM94-228ENST00000583296 MRC2Q9UBG0 1479 aa26.96■■□□□ 1.91
TMEM94-228ENST00000583296 DNAJC5Q9H3Z4 198 aa26.95■■□□□ 1.9
TMEM94-228ENST00000583296 CFTRP13569 1480 aa26.93■■□□□ 1.9
TMEM94-228ENST00000583296 CEP164Q9UPV0 1460 aa26.93■■□□□ 1.9
TMEM94-228ENST00000583296 WDR62O43379 1518 aa26.9■■□□□ 1.9
TMEM94-228ENST00000583296 FANCD2Q9BXW9 1451 aa26.9■■□□□ 1.9
TMEM94-228ENST00000583296 PRDM2Q13029 1718 aa26.84■■□□□ 1.89
TMEM94-228ENST00000583296 CCDC88BA6NC98 1476 aa26.78■■□□□ 1.88
TMEM94-228ENST00000583296 URB2Q14146 1524 aaKnown RBP26.67■■□□□ 1.86
TMEM94-228ENST00000583296 TOPBP1Q92547 1522 aa26.43■■□□□ 1.82
TMEM94-228ENST00000583296 DNMBPQ6XZF7 1577 aa26.38■■□□□ 1.81
TMEM94-228ENST00000583296 IFT140Q96RY7 1462 aa26.35■■□□□ 1.81
TMEM94-228ENST00000583296 ABCC8Q09428 1581 aa26.33■■□□□ 1.81
TMEM94-228ENST00000583296 ZNF608Q9ULD9 1512 aaPredicted RBP26.29■■□□□ 1.8
TMEM94-228ENST00000583296 EIF4G3O43432 1585 aaKnown RBP26.24■■□□□ 1.79
TMEM94-228ENST00000583296 SUPT5HO00267 1087 aaKnown RBP26.23■■□□□ 1.79
TMEM94-228ENST00000583296 TARBP1Q13395 1621 aaKnown RBP26.2■■□□□ 1.78
TMEM94-228ENST00000583296 POLA1P09884 1462 aaPredicted RBP26.18■■□□□ 1.78
TMEM94-228ENST00000583296 CUX1P39880 1505 aa26.09■■□□□ 1.77
TMEM94-228ENST00000583296 OSCARQ8IYS5 282 aa26.09■■□□□ 1.77
TMEM94-228ENST00000583296 FGD5Q6ZNL6 1462 aa26.07■■□□□ 1.76
TMEM94-228ENST00000583296 RAD54L2Q9Y4B4 1467 aa26.06■■□□□ 1.76
TMEM94-228ENST00000583296 AQRO60306 1485 aaKnown RBP eCLIP26.05■■□□□ 1.76
TMEM94-228ENST00000583296 CHD1O14646 1710 aa26.01■■□□□ 1.75
TMEM94-228ENST00000583296 SOGA1O94964 1423 aa26■■□□□ 1.75
TMEM94-228ENST00000583296 TRIM41Q8WV44 630 aa25.97■■□□□ 1.75
TMEM94-228ENST00000583296 WDR97A6NE52 1622 aa25.95■■□□□ 1.74
TMEM94-228ENST00000583296 TDRD9Q8NDG6 1382 aaKnown RBP25.93■■□□□ 1.74
TMEM94-228ENST00000583296 RIMBP3CA6NJZ7 1639 aa25.88■■□□□ 1.73
TMEM94-228ENST00000583296 RIMBP3BA6NNM3 1639 aa25.88■■□□□ 1.73
TMEM94-228ENST00000583296 RIMBP3Q9UFD9 1639 aa25.88■■□□□ 1.73
TMEM94-228ENST00000583296 SNAPC4Q5SXM2 1469 aa25.86■■□□□ 1.73
TMEM94-228ENST00000583296 PBRM1Q86U86 1689 aa25.82■■□□□ 1.72
TMEM94-228ENST00000583296 ARHGEF11O15085 1522 aa25.81■■□□□ 1.72
TMEM94-228ENST00000583296 FBLN2P98095 1184 aa25.8■■□□□ 1.72
TMEM94-228ENST00000583296 GRIN2BQ13224 1484 aa25.79■■□□□ 1.72
TMEM94-228ENST00000583296 BIVM-ERCC5R4GMW8 1640 aa25.78■■□□□ 1.72
TMEM94-228ENST00000583296 MAGI1Q96QZ7 1491 aaPredicted RBP25.78■■□□□ 1.72
TMEM94-228ENST00000583296 SYNJ1O43426 1573 aa25.77■■□□□ 1.72
TMEM94-228ENST00000583296 ABCA5Q8WWZ7 1642 aa25.77■■□□□ 1.72
TMEM94-228ENST00000583296 ABCA10Q8WWZ4 1543 aa25.76■■□□□ 1.71
TMEM94-228ENST00000583296 TOP2BQ02880 1626 aa25.76■■□□□ 1.71
TMEM94-228ENST00000583296 GAPVD1Q14C86 1478 aa25.73■■□□□ 1.71
TMEM94-228ENST00000583296 WRNQ14191 1432 aaPredicted RBP eCLIP25.73■■□□□ 1.71
TMEM94-228ENST00000583296 SYNJ2O15056 1496 aa25.67■■□□□ 1.7
TMEM94-228ENST00000583296 CLASP1Q7Z460 1538 aa25.66■■□□□ 1.7
TMEM94-228ENST00000583296 CHMP7Q8WUX9 453 aaPredicted RBP25.63■■□□□ 1.69
TMEM94-228ENST00000583296 ARAP1Q96P48 1450 aa25.57■■□□□ 1.68
TMEM94-228ENST00000583296 ADAMTS12P58397 1594 aa25.56■■□□□ 1.68
TMEM94-228ENST00000583296 CYB5RLQ6IPT4 315 aa25.49■■□□□ 1.67
TMEM94-228ENST00000583296 GRIN2AQ12879 1464 aa25.48■■□□□ 1.67
TMEM94-228ENST00000583296 ERICH3Q5RHP9 1530 aa25.45■■□□□ 1.66
TMEM94-228ENST00000583296 CEP170Q5SW79 1584 aa25.41■■□□□ 1.66
TMEM94-228ENST00000583296 FHAD1B1AJZ9 1412 aa25.4■■□□□ 1.66
TMEM94-228ENST00000583296 NUP160Q12769 1436 aa25.36■■□□□ 1.65
TMEM94-228ENST00000583296 ERCC6L2Q5T890 1561 aa25.28■■□□□ 1.64
TMEM94-228ENST00000583296 SHROOM2Q13796 1616 aa25.26■■□□□ 1.63
TMEM94-228ENST00000583296 RUSC2Q8N2Y8 1516 aa25.21■■□□□ 1.63
TMEM94-228ENST00000583296 KIF27Q86VH2 1401 aa25.2■■□□□ 1.63
TMEM94-228ENST00000583296 CUL7Q14999 1698 aa25.2■■□□□ 1.62
TMEM94-228ENST00000583296 TRHP20396 242 aaPredicted RBP25.14■■□□□ 1.62
TMEM94-228ENST00000583296 IGF1RP08069 1367 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms