RNA–Protein interactions for RNA: ENST00000583246.1

CASKIN2-206, Transcript of CASK interacting protein 2, humanhuman

TSL 3

Gene CASKIN2, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN2-206ENST00000583246 NISCHQ9Y2I1 1504 aa11.87□□□□□ -0.51
CASKIN2-206ENST00000583246 ABCC9O60706 1549 aa10.77□□□□□ -0.69
CASKIN2-206ENST00000583246 CCDC180Q9P1Z9 1646 aa10.62□□□□□ -0.71
CASKIN2-206ENST00000583246 DCAF8L2P0C7V8 631 aa10.18□□□□□ -0.78
CASKIN2-206ENST00000583246 RB1CC1Q8TDY2 1594 aa10.15□□□□□ -0.78
CASKIN2-206ENST00000583246 DNAJC5BQ9UF47 199 aa10.14□□□□□ -0.79
CASKIN2-206ENST00000583246 PABPN1Q86U42 306 aaKnown RBP eCLIP10.05□□□□□ -0.8
CASKIN2-206ENST00000583246 NACADO15069 1562 aa10.05□□□□□ -0.8
CASKIN2-206ENST00000583246 UNC13AQ9UPW8 1703 aa9.99□□□□□ -0.81
CASKIN2-206ENST00000583246 BICRAQ9NZM4 1560 aa9.89□□□□□ -0.83
CASKIN2-206ENST00000583246 MYO15BQ96JP2 1530 aa9.84□□□□□ -0.83
CASKIN2-206ENST00000583246 ZCCHC6Q5VYS8 1495 aaKnown RBP9.82□□□□□ -0.84
CASKIN2-206ENST00000583246 SCRIBQ14160 1630 aa9.78□□□□□ -0.84
CASKIN2-206ENST00000583246 DCAF1Q9Y4B6 1507 aa9.73□□□□□ -0.85
CASKIN2-206ENST00000583246 CC2D2AQ9P2K1 1620 aa9.69□□□□□ -0.86
CASKIN2-206ENST00000583246 CECR2Q9BXF3 1484 aa9.66□□□□□ -0.86
CASKIN2-206ENST00000583246 EIF4G1Q04637 1599 aaKnown RBP9.64□□□□□ -0.87
CASKIN2-206ENST00000583246 SHROOM4Q9ULL8 1493 aa9.61□□□□□ -0.87
CASKIN2-206ENST00000583246 NCAPD3P42695 1498 aa9.28□□□□□ -0.92
CASKIN2-206ENST00000583246 ATAD2BQ9ULI0 1458 aa9.28□□□□□ -0.92
CASKIN2-206ENST00000583246 SMARCA4P51532 1647 aa9.28□□□□□ -0.92
CASKIN2-206ENST00000583246 DNAJC5Q9H3Z4 198 aa9.26□□□□□ -0.93
CASKIN2-206ENST00000583246 NESP48681 1621 aa9.26□□□□□ -0.93
CASKIN2-206ENST00000583246 ERCC6Q03468 1493 aa9.26□□□□□ -0.93
CASKIN2-206ENST00000583246 SMARCA2P51531 1590 aa9.23□□□□□ -0.93
CASKIN2-206ENST00000583246 HMGXB3Q12766 1538 aa9.21□□□□□ -0.94
CASKIN2-206ENST00000583246 BAZ1BQ9UIG0 1483 aaKnown RBP9.2□□□□□ -0.94
CASKIN2-206ENST00000583246 MROH2BQ7Z745 1585 aa9.2□□□□□ -0.94
CASKIN2-206ENST00000583246 BAZ1AQ9NRL2 1556 aaPredicted RBP9.2□□□□□ -0.94
CASKIN2-206ENST00000583246 CUX2O14529 1486 aa9.19□□□□□ -0.94
CASKIN2-206ENST00000583246 PEG3Q9GZU2 1588 aa9.12□□□□□ -0.95
CASKIN2-206ENST00000583246 WIZO95785 1651 aa9.11□□□□□ -0.95
CASKIN2-206ENST00000583246 KIF21AQ7Z4S6 1674 aa9.11□□□□□ -0.95
CASKIN2-206ENST00000583246 THOC2Q8NI27 1593 aaKnown RBP9.1□□□□□ -0.95
CASKIN2-206ENST00000583246 LAMC3Q9Y6N6 1575 aa9.09□□□□□ -0.95
CASKIN2-206ENST00000583246 PDS5BQ9NTI5 1447 aa9.04□□□□□ -0.96
CASKIN2-206ENST00000583246 CADPSQ9ULU8 1353 aa9.02□□□□□ -0.97
CASKIN2-206ENST00000583246 MRC2Q9UBG0 1479 aa8.97□□□□□ -0.97
CASKIN2-206ENST00000583246 RSF1Q96T23 1441 aaPredicted RBP8.97□□□□□ -0.97
CASKIN2-206ENST00000583246 WDR62O43379 1518 aa8.95□□□□□ -0.98
CASKIN2-206ENST00000583246 TRIM41Q8WV44 630 aa8.94□□□□□ -0.98
CASKIN2-206ENST00000583246 FANCD2Q9BXW9 1451 aa8.94□□□□□ -0.98
CASKIN2-206ENST00000583246 CEP164Q9UPV0 1460 aa8.94□□□□□ -0.98
CASKIN2-206ENST00000583246 TOP2AP11388 1531 aaKnown RBP8.92□□□□□ -0.98
CASKIN2-206ENST00000583246 CFTRP13569 1480 aa8.9□□□□□ -0.98
CASKIN2-206ENST00000583246 URB2Q14146 1524 aaKnown RBP8.89□□□□□ -0.99
CASKIN2-206ENST00000583246 CCDC88BA6NC98 1476 aa8.86□□□□□ -0.99
CASKIN2-206ENST00000583246 PRDM2Q13029 1718 aa8.83□□□□□ -1
CASKIN2-206ENST00000583246 OSCARQ8IYS5 282 aa8.82□□□□□ -1
CASKIN2-206ENST00000583246 ZNF608Q9ULD9 1512 aaPredicted RBP8.8□□□□□ -1
CASKIN2-206ENST00000583246 TOPBP1Q92547 1522 aa8.77□□□□□ -1.01
CASKIN2-206ENST00000583246 IFT140Q96RY7 1462 aa8.75□□□□□ -1.01
CASKIN2-206ENST00000583246 RIMBP3CA6NJZ7 1639 aa8.73□□□□□ -1.01
CASKIN2-206ENST00000583246 RIMBP3BA6NNM3 1639 aa8.73□□□□□ -1.01
CASKIN2-206ENST00000583246 RIMBP3Q9UFD9 1639 aa8.73□□□□□ -1.01
CASKIN2-206ENST00000583246 EIF4G3O43432 1585 aaKnown RBP8.73□□□□□ -1.01
CASKIN2-206ENST00000583246 AQRO60306 1485 aaKnown RBP eCLIP8.72□□□□□ -1.01
CASKIN2-206ENST00000583246 DNMBPQ6XZF7 1577 aa8.72□□□□□ -1.01
CASKIN2-206ENST00000583246 FBLN2P98095 1184 aa8.71□□□□□ -1.02
CASKIN2-206ENST00000583246 CHD1O14646 1710 aa8.7□□□□□ -1.02
CASKIN2-206ENST00000583246 RAD54L2Q9Y4B4 1467 aa8.7□□□□□ -1.02
CASKIN2-206ENST00000583246 TARBP1Q13395 1621 aaKnown RBP8.69□□□□□ -1.02
CASKIN2-206ENST00000583246 ABCC8Q09428 1581 aa8.69□□□□□ -1.02
CASKIN2-206ENST00000583246 POLA1P09884 1462 aaPredicted RBP8.68□□□□□ -1.02
CASKIN2-206ENST00000583246 ARHGEF11O15085 1522 aa8.68□□□□□ -1.02
CASKIN2-206ENST00000583246 CYB5RLQ6IPT4 315 aa8.67□□□□□ -1.02
CASKIN2-206ENST00000583246 TDRD9Q8NDG6 1382 aaKnown RBP8.67□□□□□ -1.02
CASKIN2-206ENST00000583246 SUPT5HO00267 1087 aaKnown RBP8.66□□□□□ -1.02
CASKIN2-206ENST00000583246 SOGA1O94964 1423 aa8.65□□□□□ -1.02
CASKIN2-206ENST00000583246 FGD5Q6ZNL6 1462 aa8.64□□□□□ -1.03
CASKIN2-206ENST00000583246 CUX1P39880 1505 aa8.63□□□□□ -1.03
CASKIN2-206ENST00000583246 SNAPC4Q5SXM2 1469 aa8.61□□□□□ -1.03
CASKIN2-206ENST00000583246 ARAP1Q96P48 1450 aa8.59□□□□□ -1.03
CASKIN2-206ENST00000583246 TRHP20396 242 aaPredicted RBP8.59□□□□□ -1.03
CASKIN2-206ENST00000583246 CHMP7Q8WUX9 453 aaPredicted RBP8.59□□□□□ -1.03
CASKIN2-206ENST00000583246 WDR97A6NE52 1622 aa8.56□□□□□ -1.04
CASKIN2-206ENST00000583246 PBRM1Q86U86 1689 aa8.56□□□□□ -1.04
CASKIN2-206ENST00000583246 CLASP1Q7Z460 1538 aa8.54□□□□□ -1.04
CASKIN2-206ENST00000583246 GRIN2BQ13224 1484 aa8.54□□□□□ -1.04
CASKIN2-206ENST00000583246 SYNJ1O43426 1573 aa8.53□□□□□ -1.04
CASKIN2-206ENST00000583246 GAPVD1Q14C86 1478 aa8.53□□□□□ -1.04
CASKIN2-206ENST00000583246 MAGI1Q96QZ7 1491 aaPredicted RBP8.52□□□□□ -1.05
CASKIN2-206ENST00000583246 SYNJ2O15056 1496 aa8.51□□□□□ -1.05
CASKIN2-206ENST00000583246 ABCA5Q8WWZ7 1642 aa8.51□□□□□ -1.05
CASKIN2-206ENST00000583246 ABCA10Q8WWZ4 1543 aa8.49□□□□□ -1.05
CASKIN2-206ENST00000583246 ERCC6L2Q5T890 1561 aa8.48□□□□□ -1.05
CASKIN2-206ENST00000583246 TOP2BQ02880 1626 aa8.46□□□□□ -1.06
CASKIN2-206ENST00000583246 BIVM-ERCC5R4GMW8 1640 aa8.46□□□□□ -1.06
CASKIN2-206ENST00000583246 WRNQ14191 1432 aaPredicted RBP eCLIP8.46□□□□□ -1.06
CASKIN2-206ENST00000583246 CEP170Q5SW79 1584 aa8.45□□□□□ -1.06
CASKIN2-206ENST00000583246 GRIN2AQ12879 1464 aa8.45□□□□□ -1.06
CASKIN2-206ENST00000583246 ADAMTS12P58397 1594 aa8.44□□□□□ -1.06
CASKIN2-206ENST00000583246 FHAD1B1AJZ9 1412 aa8.4□□□□□ -1.06
CASKIN2-206ENST00000583246 NUP160Q12769 1436 aa8.39□□□□□ -1.07
CASKIN2-206ENST00000583246 ERICH3Q5RHP9 1530 aa8.38□□□□□ -1.07
CASKIN2-206ENST00000583246 SHROOM2Q13796 1616 aa8.37□□□□□ -1.07
CASKIN2-206ENST00000583246 PRG4Q92954 1404 aaPredicted RBP8.37□□□□□ -1.07
CASKIN2-206ENST00000583246 JPH4Q96JJ6 628 aa8.36□□□□□ -1.07
CASKIN2-206ENST00000583246 TTBK1Q5TCY1 1321 aaPredicted RBP8.34□□□□□ -1.07
CASKIN2-206ENST00000583246 AEBP2Q6ZN18 517 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms